DK960422
Clone id TST39A01NGRL0007_G01
Library
Length 731
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_G01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GTCTGTGGCTTCTGTGGCTTCTTTCTTTCAGAAGGCATGCAGCGGTTCTTGCCCTCCGAA
TGCTCCTCGCCTCTGCAAGGCTGCGTCATCTGAGCTCGTTAGTAGCTCACTTTGTGCTCC
TTCTTGGGTCTCGAGGAATCGAGGAGCAATGCTGTGTTTGGACTCTCTCCAGCCACTGCA
AGCTGCGATGGCCCAGGCATCCTTTGTTTCACGGTTGAGTCTGGGATCTCAAGAGCCTGT
GCTGGTTCTTCAGGGCCACTTTTTTTCTGCGCTCACGGTGTTGTGATACTTCTGAAGAAT
TTTTTGATGGAGCTTTAGGTAGGGCACGCGGTTCTTAAATTGTGATCGCCTGGATTTGGG
GGTGATACTGCATCAGATGGGAGTGCTCAGGTGGTTGACAGCTAGTTGGGGGATATTTGT
ACATGATTTGTTAGTTTTGAGTCTTGAAGTCTCCCTTCTTTTTTTTGAGAGTTGTAGCAG
TGCCGAAAAATGTTTTACAATAACCACTTATTTATTGTACTGAAAAAAAAACCCGTCAGT
TCCCAATCCACTGTCTGATCACTGACTCCTTACAAGCTTCCTTAACAAGCTTGGGTCTGG
AGGAATGTACTGAAAGAGCCAAATAGCTGAAAATGGTGAGGATGACTAGAGTGCTTTCTG
GATTTCTTATGAATGTGATTTTGACTCTTGGTCCCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5RBI7
Definition sp|Q5RBI7|PDZD7_PONAB PDZ domain-containing protein 7 OS=Pongo abelii
Align length 64
Score (bit) 32.0
E-value 3.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960422|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_G01, 5'
(695 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5RBI7|PDZD7_PONAB PDZ domain-containing protein 7 OS=Pongo a... 32 3.3
sp|Q9P6R1|VRP1_SCHPO Verprolin OS=Schizosaccharomyces pombe GN=v... 32 4.2
sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH... 32 4.2
sp|Q8VG02|OL488_MOUSE Olfactory receptor 488 OS=Mus musculus GN=... 31 5.5
sp|P39061|COIA1_MOUSE Collagen alpha-1(XVIII) chain OS=Mus muscu... 31 5.5
sp|P09958|FURIN_HUMAN Furin OS=Homo sapiens GN=FURIN PE=1 SV=2 31 7.2

>sp|Q5RBI7|PDZD7_PONAB PDZ domain-containing protein 7 OS=Pongo
abelii GN=PDZD7 PE=2 SV=1
Length = 528

Score = 32.0 bits (71), Expect = 3.3
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = -1

Query: 221 DSTVKQRMPGPSQL--AVAGESPNTALLLDSSRPKKEHKVSY*RAQMTQP------CRGE 66
D+T++ P P + + ESP TALLL SRP+ S + P CRGE
Sbjct: 394 DTTIRSDGPQPGRCLDSAISESPKTALLLALSRPRPPITRSQSYLTLWAPPVAPSVCRGE 453

Query: 65 EHSE 54
E +E
Sbjct: 454 EAAE 457


>sp|Q9P6R1|VRP1_SCHPO Verprolin OS=Schizosaccharomyces pombe GN=vrp1
PE=1 SV=1
Length = 309

Score = 31.6 bits (70), Expect = 4.2
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = -1

Query: 398 STT*ALPSDAVSPPNPGDHNLR--TACPT*SSIKKFFRSITTP*AQKKSGPEEPAQALEI 225
S+ A P A +PP P LR T+ P SI P S P P++A I
Sbjct: 118 SSASAAPPSAPAPPTP-QSELRPPTSAPPRPSI---------PPPSPASAPPIPSKAPPI 167

Query: 224 PDSTVKQRMPGPSQLAVAGESPNTALLLDSSRPKKEHKV 108
P S +P P+Q A +SP +A L S+ P KV
Sbjct: 168 PSS-----LPPPAQPAAPVKSPPSAPSLPSAVPPMPPKV 201


>sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH10
OS=Homo sapiens GN=MARCH10 PE=2 SV=2
Length = 808

Score = 31.6 bits (70), Expect = 4.2
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -1

Query: 314 SSIKKFFRSITTP*AQKKSGPEEPAQALEIPDSTVKQRMPGPSQLAVAGESPNTALLLDS 135
+S+K+ +S T +K P EP+ A + P +++R P + V+ ES + D
Sbjct: 102 TSVKQKHKSTMTVRKAEKVDPSEPSPADQAPMVLLRKRKPNLRRFTVSPESHSPRASGDR 161

Query: 134 SRPKKE 117
SR K++
Sbjct: 162 SRQKQQ 167


>sp|Q8VG02|OL488_MOUSE Olfactory receptor 488 OS=Mus musculus
GN=Olfr488 PE=2 SV=1
Length = 314

Score = 31.2 bits (69), Expect = 5.5
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = -3

Query: 507 VVIVKHFSALLQLSKKRRETSRLKTNKSCTNIPQLAVNHLSTPI*CSITPKSRRSQFKNR 328
V+++ +F L+ + K R R K +CT+ + T I + PKS S+ +N+
Sbjct: 216 VIVISYFYILITILKMRSTEGRQKAFSTCTSHLTAVTLYYGTIIFIYVMPKSTYSRDQNK 275

Query: 327 V 325
V
Sbjct: 276 V 276


>sp|P39061|COIA1_MOUSE Collagen alpha-1(XVIII) chain OS=Mus musculus
GN=Col18a1 PE=1 SV=4
Length = 1774

Score = 31.2 bits (69), Expect = 5.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1

Query: 230 EIPDSTVKQRMPGPSQLAVAGESPNTALLLDSSRP 126
E+PDS++ +P P++L+ A + T L L S+ P
Sbjct: 165 EVPDSSIPTVLPSPAELSSAPQGSKTTLWLSSAIP 199


>sp|P09958|FURIN_HUMAN Furin OS=Homo sapiens GN=FURIN PE=1 SV=2
Length = 794

Score = 30.8 bits (68), Expect = 7.2
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Frame = +2

Query: 20 SFFQKACSGSCPPN-APRLCKAASS-----ELVSSSLCAPSWVS--RNRGAML--CLD-- 163
S QK+C CPP AP++ S E + +S+CAP S +G L CL
Sbjct: 604 SLHQKSCVQHCPPGFAPQVLDTHYSTENDVETIRASVCAPCHASCATCQGPALTDCLSCP 663

Query: 164 ---SLQPLQAAMAQASFVSRLSLGSQEP 238
SL P++ ++ S SR S Q+P
Sbjct: 664 SHASLDPVEQTCSRQSQSSRESPPQQQP 691


tr_hit_id A4IDC7
Definition tr|A4IDC7|A4IDC7_LEIIN Putative uncharacterized protein OS=Leishmania infantum
Align length 99
Score (bit) 34.3
E-value 7.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960422|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_G01, 5'
(695 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4IDC7|A4IDC7_LEIIN Putative uncharacterized protein OS=Leish... 34 7.8
tr|Q1DWZ9|Q1DWZ9_COCIM Putative uncharacterized protein OS=Cocci... 34 7.8

>tr|A4IDC7|A4IDC7_LEIIN Putative uncharacterized protein OS=Leishmania
infantum GN=LinJ36.4080 PE=4 SV=1
Length = 1828

Score = 34.3 bits (77), Expect = 7.8
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Frame = -1

Query: 254 PEEPA--QALEIPDSTVKQRMPGPSQL----------AVAGESPNTALLLDSSR-PKKEH 114
P PA ++L P +TV+Q P + L AV P A L SR P E
Sbjct: 840 PALPASHKSLVAPSATVQQHPPLHNALPPNHPSSAKNAVPVSGPVKAKKLKKSRNPVHET 899

Query: 113 KVSY*RA--QMTQPCRGEEHSEGKNRCMPSERKKPQKPQ 3
S R+ Q T P RG H + C SE + P +PQ
Sbjct: 900 SASMFRSSLQSTSPSRGSAHRPSTSPCRLSESRHPAQPQ 938


>tr|Q1DWZ9|Q1DWZ9_COCIM Putative uncharacterized protein
OS=Coccidioides immitis GN=CIMG_05164 PE=4 SV=1
Length = 732

Score = 34.3 bits (77), Expect = 7.8
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -2

Query: 391 PEHSHLMQYHPQIQAITI*EPRALPKAPSKNSSEVSQHRERRKKVALKNQH-RLLRSQTQ 215
P HSH M HPQI P+ L + ++ + R+R++++ L+ QH + + Q Q
Sbjct: 83 PTHSHQMFQHPQIAQNYANNPQLLQQQQLQHQQYI---RQRQQQMILQQQHQQQQQQQQQ 139

Query: 214 P*NKGCLGHRSLQWLERVQTQHCSSIP 134
+ + Q ++ Q QH +S+P
Sbjct: 140 QQQQQQQQQQQQQQQQQQQQQHPASLP 166