DK960434
Clone id TST39A01NGRL0007_G14
Library
Length 362
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_G14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GTGCTACGCAATTCTGCATGACGAGAACGCTCTTGGTGCTGTTTTTGGCATCTGGAAGGA
CTTGAGAACAGCTTGCACATGGAAGGAAGTGGAGGAGAAAGTGTGGGGTTTCCTGGTACA
TTATGAGAATGCTTGGAACCAAATACATCGATTCATGCTCATAGAGAACCTGCGAATTTA
CAAGTATGCTTTTGTGTTAACATATCCTATTGGATAAAGTATTTGGGGAGCTACAATCCT
CTTTGAGGTCTCCCGGAACATTCAGCTATGATTTGTAAAGTTTGTTTGTCCCTCTGCCTA
AAGGAGGGGCGTTTGCTGAGGGAATTTCAGCCCCTGTACTGCCATGACAACAAAAAAAAA
AA
■■Homology search results ■■ -
sp_hit_id Q9M9E8
Definition sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana
Align length 41
Score (bit) 58.9
E-value 7.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960434|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_G14, 5'
(348 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thal... 59 7e-09
sp|Q750X7|APTH1_ASHGO Acyl-protein thioesterase 1 OS=Ashbya goss... 33 0.44
sp|Q9JL70|FANCA_MOUSE Fanconi anemia group A protein homolog OS=... 30 2.8
sp|Q19157|PIN2_CAEEL LIM domain-containing protein pin-2 OS=Caen... 30 3.7
sp|Q9UBY8|CLN8_HUMAN Protein CLN8 OS=Homo sapiens GN=CLN8 PE=1 SV=3 30 4.8
sp|Q5JZQ7|CLN8_CANFA Protein CLN8 OS=Canis familiaris GN=CLN8 PE... 30 4.8
sp|Q9JHS2|HIF3A_RAT Hypoxia-inducible factor 3 alpha OS=Rattus n... 30 4.8
sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein ... 29 6.3

>sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana
GN=At1g78280 PE=2 SV=2
Length = 949

Score = 58.9 bits (141), Expect = 7e-09
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHY 124
CY ILH+EN LG++F IW +LRTA +W++VE+ VW L Y
Sbjct: 909 CYCILHEENVLGSIFSIWDELRTAESWEQVEQTVWSLLNTY 949


>sp|Q750X7|APTH1_ASHGO Acyl-protein thioesterase 1 OS=Ashbya
gossypii GN=AGL188W PE=3 SV=1
Length = 235

Score = 33.1 bits (74), Expect = 0.44
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2

Query: 182 KYAFVLTYPIG*SIWGATILFE-VSRNIQL*FVKFVCPSA*RRGVC*GNFSPCTA 343
KYAF++ + +G S G T L E + R+ L +FV P+A R + NF+P TA
Sbjct: 17 KYAFIIFHGLGDSGAGWTFLAEYLQRDPALASAQFVFPTAPVRPITANNFAPATA 71


>sp|Q9JL70|FANCA_MOUSE Fanconi anemia group A protein homolog OS=Mus
musculus GN=Fanca PE=2 SV=1
Length = 1439

Score = 30.4 bits (67), Expect = 2.8
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -3

Query: 247 LKEDCSSPNTLSNRIC*HKSILVNSQVLYEHESMYLVPSILIMYQETPHFLLHFLPCASC 68
L ED SSP ++ R + + +++E +P + P+++ HFLP
Sbjct: 526 LYEDLSSPGDIAERESQAVQDVKKAIMVFEQTGKIPMPVLEASIFRRPYYVSHFLPTLLA 585

Query: 67 SQVLPD 50
+VLP+
Sbjct: 586 PRVLPE 591


>sp|Q19157|PIN2_CAEEL LIM domain-containing protein pin-2
OS=Caenorhabditis elegans GN=pin-2 PE=2 SV=1
Length = 329

Score = 30.0 bits (66), Expect = 3.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3

Query: 133 SILIMYQETPHFLLHFLPCASCSQVLPDAKNSTKSVLVMQNC 8
S L+ YQE P+ HF C +C +VL + K L C
Sbjct: 153 SDLLTYQENPYHAYHF-KCTTCKKVLESDARTIKDDLFCPRC 193


>sp|Q9UBY8|CLN8_HUMAN Protein CLN8 OS=Homo sapiens GN=CLN8 PE=1 SV=3
Length = 286

Score = 29.6 bits (65), Expect = 4.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1

Query: 34 WCCFWHLEGLENSLHM 81
W CFWH +GL +SL++
Sbjct: 213 WVCFWHWDGLVSSLYL 228


>sp|Q5JZQ7|CLN8_CANFA Protein CLN8 OS=Canis familiaris GN=CLN8 PE=1
SV=1
Length = 288

Score = 29.6 bits (65), Expect = 4.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1

Query: 34 WCCFWHLEGLENSLHM 81
W CFWH +GL +SL++
Sbjct: 213 WVCFWHWDGLVSSLYL 228


>sp|Q9JHS2|HIF3A_RAT Hypoxia-inducible factor 3 alpha OS=Rattus
norvegicus GN=Hif3a PE=1 SV=1
Length = 662

Score = 29.6 bits (65), Expect = 4.8
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -3

Query: 157 HESMYLVPSILIMYQ--ETPHFLLHFLPCASCSQ 62
HE + L PS+L +YQ ET HFLP A +Q
Sbjct: 627 HEPLGLAPSLLSLYQHEETIQSRNHFLPAAGLAQ 660


>sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein
kinase lvsG OS=Dictyostelium discoideum GN=lvsG PE=3 SV=1
Length = 2179

Score = 29.3 bits (64), Expect = 6.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Frame = -2

Query: 149 DVFGSKHSHNVPGN--------PTLSPPLPSMCKLFSSPSRCQKQHQERS 24
D FGS S + PGN P++S + S+ S S+ Q HQ+ S
Sbjct: 865 DSFGSNSSSSAPGNSNSNILLSPSMSSSMGSLNSATSPSSQSQSSHQQTS 914


tr_hit_id A7NUV3
Definition tr|A7NUV3|A7NUV3_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera
Align length 42
Score (bit) 64.3
E-value 3.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960434|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_G14, 5'
(348 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7NUV3|A7NUV3_VITVI Chromosome chr18 scaffold_1, whole genome... 64 3e-09
tr|Q75LR4|Q75LR4_ORYSJ Os03g0389900 protein OS=Oryza sativa subs... 62 1e-08
tr|A3AIN6|A3AIN6_ORYSJ Putative uncharacterized protein OS=Oryza... 62 1e-08
tr|A2XHI8|A2XHI8_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08
tr|A0EM54|A0EM54_LOLPR Truncated JUMONJIC (Fragment) OS=Lolium p... 62 1e-08
tr|A9T256|A9T256_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.003
tr|A9SHT7|A9SHT7_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.099
tr|Q06PX6|Q06PX6_PASHA Phosphonate monoester hydrolase OS=Pasteu... 33 5.4
tr|A7JT57|A7JT57_PASHA Arylsulfatase OS=Mannheimia haemolytica P... 33 5.4

>tr|A7NUV3|A7NUV3_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00015195001
PE=4 SV=1
Length = 953

Score = 64.3 bits (155), Expect = 3e-09
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHYE 127
CY ILH+EN LGA+F +WK+L+ A +W+EVEE VWG L +Y+
Sbjct: 909 CYCILHEENVLGAIFSLWKELKVAKSWEEVEETVWGELNNYD 950


>tr|Q75LR4|Q75LR4_ORYSJ Os03g0389900 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0017N12.11 PE=2 SV=1
Length = 953

Score = 62.4 bits (150), Expect = 1e-08
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHYENA 133
CY ILH++N LGA+F +WKDL TA +W++VE VWG L Y+ +
Sbjct: 903 CYCILHEDNVLGAIFSLWKDLGTATSWEDVEHLVWGELNQYQQS 946


>tr|A3AIN6|A3AIN6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_010658 PE=4 SV=1
Length = 917

Score = 62.4 bits (150), Expect = 1e-08
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHYENA 133
CY ILH++N LGA+F +WKDL TA +W++VE VWG L Y+ +
Sbjct: 867 CYCILHEDNVLGAIFSLWKDLGTATSWEDVEHLVWGELNQYQQS 910


>tr|A2XHI8|A2XHI8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_11873 PE=4 SV=1
Length = 917

Score = 62.4 bits (150), Expect = 1e-08
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHYENA 133
CY ILH++N LGA+F +WKDL TA +W++VE VWG L Y+ +
Sbjct: 867 CYCILHEDNVLGAIFSLWKDLGTATSWEDVEHLVWGELNQYQQS 910


>tr|A0EM54|A0EM54_LOLPR Truncated JUMONJIC (Fragment) OS=Lolium
perenne PE=2 SV=1
Length = 149

Score = 62.0 bits (149), Expect = 1e-08
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHYE 127
CY ILHD+N L A+FG+WK+LRTA +W++VE VW L Y+
Sbjct: 100 CYCILHDDNVLAAIFGLWKELRTATSWEDVEHLVWDELNRYQ 141


>tr|A9T256|A9T256_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_139046 PE=4 SV=1
Length = 930

Score = 44.3 bits (103), Expect = 0.003
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHYENAWN 139
CY +LH+ +A+ A+F KD R A + +E+EEK+ GFL N WN
Sbjct: 877 CYCLLHEHDAMSAIFRQRKDCRNADSLEELEEKLLGFL----NEWN 918


>tr|A9SHT7|A9SHT7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_185122 PE=4 SV=1
Length = 960

Score = 39.3 bits (90), Expect = 0.099
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2

Query: 2 CYAILHDENALGAVFGIWKDLRTACTWKEVEEKVWGFLVHYENAWN 139
CY +LH+ +A+G + +D R + +E+EE +WG L N WN
Sbjct: 907 CYCLLHEHDAMGEILKEREDCRNVDSLEEMEEMLWGVL----NEWN 948


>tr|Q06PX6|Q06PX6_PASHA Phosphonate monoester hydrolase
OS=Pasteurella haemolytica GN=mh1158 PE=4 SV=1
Length = 482

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +2

Query: 32 LGAVFGIWKDLRTACTWKEVEEKVWGFLVHYENAWNQIHRFMLIENLRIYKYAFVLTYPI 211
+ ++G+W+ + WKEV K WG++ ++A ++ RF +E +Y+ F++
Sbjct: 257 ISQMWGMWE--ASEDRWKEVISKFWGYITLIDDAIGELFRF--LEENNLYENTFLVATAD 312

Query: 212 G*SIWGA-------TILFEVSRNIQL 268
GA +FE + NI L
Sbjct: 313 HGDAMGAHKMIEKGEFMFETTYNIPL 338


>tr|A7JT57|A7JT57_PASHA Arylsulfatase OS=Mannheimia haemolytica
PHL213 GN=aslA PE=4 SV=1
Length = 482

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +2

Query: 32 LGAVFGIWKDLRTACTWKEVEEKVWGFLVHYENAWNQIHRFMLIENLRIYKYAFVLTYPI 211
+ ++G+W+ + WKEV K WG++ ++A ++ RF +E +Y+ F++
Sbjct: 257 ISQMWGMWE--ASEDRWKEVISKFWGYITLIDDAIGELFRF--LEENNLYENTFLVATAD 312

Query: 212 G*SIWGA-------TILFEVSRNIQL 268
GA +FE + NI L
Sbjct: 313 HGDAMGAHKMIEKGEFMFETTYNIPL 338