DK960439 [AcEST]

DK960439
Clone id	TST39A01NGRL0007_G19
Library	TST39
Length	620
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_G19. 5' end sequence.
Accession	DK960439
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL2890Contig1
Sequence	CTCTCGTGCGTTGATAGGCGTTCGAAGTTTGCTTTAAAAAGAATCTTTTCGGCCTCGTAT TCGCCTTCTGCACGTCTTGGGCTATGCACGCAGTCCCTTCTTCGCCTGAGCCGGGTTGGC TCTGCAAGATGGTGTCCATCCCCTCCTCCTGCCATGCCAGGTCCGTCGCTGGCTGACTCA ATCGCTACACGCTCCCTCTCCTTTTTCCTTCCTCGTTCACTCAACTAAAGGATCTTCCCC GATTCGTGCTAATAAGAGATTAAAAAGGATTGGGTACCCCCTACGTGTCATCGCCACTCC ATGAACTGCCTTTAATTAGGCCTGTAATGCAGGTTTGTGCGCATCGTTTGCAGACAACTA CAGGAGATGGTGAGACCATGAGACCATGATCATTGCACTTACAGTGCGTGAAAGCCCAAA GTGCTGCAACTCCTCCAAGCGCTTGGCGGGACACAACTCTCCTCTAGCACTCGCGCGCGG ATCTGCAGCCTCCTGCCGGAGTTTAAACTTCACGCCTTGAAACATCAACTAGATGTTGGG ATTGTAGAGAGTTACGACTTGACGATCGCAGGCTCACTGCGACATGCAACATCGTGCACC GAAATGATCCCGGGCAGGCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P17552
Definition	sp\|P17552\|CHRB1_RALME Protein chrB OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Align length	22
Score (bit)	32.3
E-value	2.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960439\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_G19, 5' (620 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P17552\|CHRB1_RALME Protein chrB OS=Ralstonia metallidurans (s... 32 2.0 >sp\|P17552\|CHRB1_RALME Protein chrB OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=chrB1 PE=2 SV=2 Length = 324 Score = 32.3 bits (72), Expect = 2.0 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +3 Query: 84 MHAVPSSPEPGWLCKMVSIPSS 149 M+A+PSSPE WL +VS+P+S Sbjct: 1 MNALPSSPETAWLLLVVSLPTS 22
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q092M1
Definition	tr\|Q092M1\|Q092M1_STIAU Apolipoprotein N-acyltransferase OS=Stigmatella aurantiaca DW4/3-1
Align length	52
Score (bit)	35.4
E-value	2.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960439\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_G19, 5' (620 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q092M1\|Q092M1_STIAU Apolipoprotein N-acyltransferase OS=Stigm... 35 2.7 tr\|Q83D95\|Q83D95_COXBU Glycosyltransferase OS=Coxiella burnetii ... 34 7.9 >tr\|Q092M1\|Q092M1_STIAU Apolipoprotein N-acyltransferase OS=Stigmatella aurantiaca DW4/3-1 GN=lnt PE=4 SV=1 Length = 412 Score = 35.4 bits (80), Expect = 2.7 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +3 Query: 306 LPLIRPVMQVCAHRLQTTTGD----GETMRPSLHLQCVKAQSAATPPSAWR 449 LPL+R V + + + +TG GET P +LH + A+ AATP S WR Sbjct: 357 LPLVRSVTKGYSGTFEPSTGTWQEAGETQGPATLHRGRILARPAATPYSQWR 408 >tr\|Q83D95\|Q83D95_COXBU Glycosyltransferase OS=Coxiella burnetii GN=CBU_0843 PE=4 SV=2 Length = 385 Score = 33.9 bits (76), Expect = 7.9 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 78 WAMHAVPSSPEPGWLCKMVSIPSSCHARSVAGLNRY 188 W A+P E G++C+ +IPS + G LNRY Sbjct: 183 WISEAIPEKEEKGFICERFNIPSDAVLILIIGFLNRY 219