DK960441 |
Clone id |
TST39A01NGRL0007_G21 |
Library |
TST39 |
Length |
584 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_G21. 5' end sequence. |
Accession |
DK960441 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1308Contig1 |
Sequence |
CATCGCCTGGGCTGTCGAGCCCGCCAATGCCGCCATTTACATCGAGTCTACGCATCTCGC TGCATTAGCGGCGCACCATTTCAAAGTGGTATTCGTCTTGGAGGGGCCGGGAGGGCCTTG ATGATCTGCAGCACAGACAGTAGTCTACATGGAGCATTCTCAAGGGACTGATGGCAATGA TCGGCCTTGTGTTTTGGTCACCAACGATGACGGTATCCATGCACCGGGATTGAGAGCTTT GGTGAGTGCCTTGGTCGACAGCGGCGCATGCCAGGTCTTTGTCTGTGCTCCTGTCCGGGA TCAATCCGGTGTTAGTCATTCACTCACAATTCATGAAAATCTGGTAGCTAGGTCCATCGA AATCAAAGGAGCCATTGCTTATGCAGTCTCTGGAACACCTGCTGATTGTGTCTCTCTCAG CTTGTCTGGAGTTCTCTTCCCTCCAATAAAACCTTCTCTAGTTCTCAGTGGGATAAATAA GGGATGCAATTGTGGATATCATATATATTATTCAGGAACAGTAGCAGGAGCTCGTGAGGC GGTCATTTGTGGGGTGCCTGCCATTTCACTTTCACTGAATTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q24WI0 |
Definition |
sp|Q24WI0|SURE_DESHY 5'-nucleotidase surE OS=Desulfitobacterium hafniense (strain Y51) |
Align length |
129 |
Score (bit) |
119.0 |
E-value |
1.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NSV3 |
Definition |
tr|A9NSV3|A9NSV3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
144 |
Score (bit) |
192.0 |
E-value |
1.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960441|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_G21, 5' (584 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NSV3|A9NSV3_PICSI Putative uncharacterized protein OS=Picea... 192 1e-47 tr|A9SJL1|A9SJL1_PHYPA Predicted protein (Fragment) OS=Physcomit... 187 5e-46 tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea... 186 8e-46 tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Popul... 182 9e-45 tr|A9U1T5|A9U1T5_PHYPA Predicted protein (Fragment) OS=Physcomit... 176 7e-43 tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome ... 173 6e-42 tr|A7NWM5|A7NWM5_VITVI Chromosome chr5 scaffold_2, whole genome ... 166 7e-40 tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized prote... 159 1e-37 tr|B7E331|B7E331_ORYSJ cDNA clone:001-019-B07, full insert seque... 156 9e-37 tr|A7PE57|A7PE57_VITVI Chromosome chr11 scaffold_13, whole genom... 155 2e-36 tr|Q7XB62|Q7XB62_ORYSJ Os07g0204500 protein OS=Oryza sativa subs... 155 2e-36 tr|B4G027|B4G027_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1 154 5e-36 tr|A2WUB4|A2WUB4_ORYSI Putative uncharacterized protein OS=Oryza... 153 8e-36 tr|Q8LAM2|Q8LAM2_ARATH Putative uncharacterized protein (At4g149... 152 2e-35 tr|Q0JJY1|Q0JJY1_ORYSJ cDNA clone:J023046I03, full insert sequen... 152 2e-35 tr|A2ZX36|A2ZX36_ORYSJ Putative uncharacterized protein OS=Oryza... 152 2e-35 tr|B6SLG3|B6SLG3_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1 143 8e-33 tr|O23348|O23348_ARATH Putative uncharacterized protein dl3505w ... 129 1e-28 tr|Q0YGW6|Q0YGW6_9DELT Stationary-phase survival protein SurE OS... 122 2e-26 tr|A8IGE2|A8IGE2_CHLRE Predicted protein (Fragment) OS=Chlamydom... 122 2e-26 tr|Q9SSN8|Q9SSN8_ARATH F3N23.8 protein OS=Arabidopsis thaliana G... 119 9e-26 tr|B8B887|B8B887_ORYSI Putative uncharacterized protein OS=Oryza... 119 9e-26 tr|A3BHM3|A3BHM3_ORYSJ Putative uncharacterized protein OS=Oryza... 119 9e-26 tr|B8FYS8|B8FYS8_DESHD Stationary-phase survival protein SurE OS... 119 1e-25 tr|B5EHF5|B5EHF5_GEOBB Stationary-phase survival protein SurE OS... 118 2e-25 tr|Q1JYK3|Q1JYK3_DESAC Stationary-phase survival protein SurE OS... 117 4e-25 tr|B3K221|B3K221_9DELT Stationary-phase survival protein SurE OS... 116 1e-24 tr|A8PQ86|A8PQ86_9COXI 5'/3'-nucleotidase SurE OS=Rickettsiella ... 115 2e-24 tr|A4AU78|A4AU78_9FLAO Acid phosphatase OS=Flavobacteriales bact... 115 2e-24 tr|B8ERC6|B8ERC6_METSI Stationary-phase survival protein SurE OS... 113 7e-24
>tr|A9NSV3|A9NSV3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 200
Score = 192 bits (488), Expect = 1e-47 Identities = 94/144 (65%), Positives = 111/144 (77%) Frame = +2
Query: 152 EHSQGTDGNDRPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTI 331 +HS G + RP +LVTNDDGI APGLR+LV LV++G V VCAP ++S V HS+T Sbjct: 29 QHSDGEVDDRRPTLLVTNDDGIDAPGLRSLVDVLVETGRYNVSVCAPDSEKSAVGHSITS 88
Query: 332 HENLVARSIEIKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYY 511 N+ R +EIKGA A+ +SGTPADCVSLSLSG LF KP+LV+SGINKG NCGYHI Y Sbjct: 89 RGNIAVRQVEIKGATAFELSGTPADCVSLSLSGALFSWSKPTLVISGINKGSNCGYHIVY 148
Query: 512 SGTVAGAREAVICGVPAISLSLNW 583 SGTVAGAREA ICGVP+I+LS NW Sbjct: 149 SGTVAGAREAFICGVPSIALSYNW 172
>tr|A9SJL1|A9SJL1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_46129 PE=4 SV=1 Length = 219
Score = 187 bits (474), Expect = 5e-46 Identities = 89/138 (64%), Positives = 111/138 (80%) Frame = +2
Query: 170 DGNDRPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVA 349 +G+ P VL+TNDDGI+APGLRALV+AL++ G+C VFVCAP ++S VSHS+T L Sbjct: 8 EGSSLPNVLITNDDGINAPGLRALVAALIEDGSCHVFVCAPDSEKSSVSHSITPRAILEV 67
Query: 350 RSIEIKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAG 529 S+ I GA A+ SGTPADCVSL+++ +FP KP+LV+SGINKG NCGYHI+YSGTVAG Sbjct: 68 ASVNIPGATAFETSGTPADCVSLAMTASIFPWTKPTLVVSGINKGSNCGYHIFYSGTVAG 127
Query: 530 AREAVICGVPAISLSLNW 583 AREA I GVPAIS+SL+W Sbjct: 128 AREAYISGVPAISISLDW 145
>tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 394
Score = 186 bits (472), Expect = 8e-46 Identities = 91/134 (67%), Positives = 106/134 (79%) Frame = +2
Query: 182 RPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVARSIE 361 RP VLVTN+DGI APGL+ LV ALV+ G V VCAP D+SG H +++ + LVA S+ Sbjct: 64 RPIVLVTNEDGIEAPGLKCLVEALVNGGRFNVHVCAPESDKSGSGHCVSVRQTLVASSVG 123
Query: 362 IKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAGAREA 541 IKGA AY VSGTPADCVSL LSG LFP KPSLV+SGINKG NCGYHI YSG VAGAREA Sbjct: 124 IKGATAYEVSGTPADCVSLGLSGALFPWKKPSLVISGINKGSNCGYHIIYSGAVAGAREA 183
Query: 542 VICGVPAISLSLNW 583 ++ GVP+I++SLNW Sbjct: 184 LMSGVPSIAISLNW 197
>tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 394
Score = 182 bits (463), Expect = 9e-45 Identities = 89/149 (59%), Positives = 110/149 (73%) Frame = +2
Query: 137 TVVYMEHSQGTDGNDRPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVS 316 T +E+++ N +P VLVTN DGI +PGL +LV ALV G V VCAP D+S S Sbjct: 53 TTTCVENTEEDSNNSKPIVLVTNGDGIDSPGLVSLVEALVREGLYNVHVCAPQSDKSVSS 112
Query: 317 HSLTIHENLVARSIEIKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCG 496 HS+T+HE + S+EI GAIAY VSGTP DCVSL+LSG LF KP LV+SGIN+G NCG Sbjct: 113 HSVTLHEAIAVTSVEINGAIAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCG 172
Query: 497 YHIYYSGTVAGAREAVICGVPAISLSLNW 583 +H+ YSG VAGAREA+ CGVP++S+SLNW Sbjct: 173 HHMIYSGVVAGAREALFCGVPSLSISLNW 201
>tr|A9U1T5|A9U1T5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_5105 PE=4 SV=1 Length = 208
Score = 176 bits (447), Expect = 7e-43 Identities = 89/134 (66%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2
Query: 185 PCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVARSIEI 364 P VLVTNDDGI+APGLRALV+ L++ +C VF+CAP +QSGVSHS+T L S+ I Sbjct: 1 PNVLVTNDDGINAPGLRALVAVLIEDVSCNVFICAPDSEQSGVSHSITHRSVLEVSSVNI 60
Query: 365 KGAIAYAVS-GTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAGAREA 541 GA A+ S GTPADCVSL+L+ +FP KP+LV+SGINKG NCGYHI YSGTVAGAREA Sbjct: 61 LGATAFETSAGTPADCVSLALTSSIFPWAKPTLVVSGINKGSNCGYHIVYSGTVAGAREA 120
Query: 542 VICGVPAISLSLNW 583 I GVPAI+LSL+W Sbjct: 121 FINGVPAIALSLDW 134
>tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034123001 PE=4 SV=1 Length = 384
Score = 173 bits (439), Expect = 6e-42 Identities = 84/134 (62%), Positives = 100/134 (74%) Frame = +2
Query: 182 RPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVARSIE 361 +P VLVTN DGI APGL LV ALV G C V VCAP D+S HS+T+ E + S E Sbjct: 59 KPVVLVTNADGIEAPGLNFLVEALVRDGLCNVHVCAPQSDKSVSGHSVTLRETVAVTSAE 118
Query: 362 IKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAGAREA 541 I GA AY VSGTP DCVSL+LSG LF KP LV+SGIN+G +CG+H++YSG VAGAREA Sbjct: 119 INGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREA 178
Query: 542 VICGVPAISLSLNW 583 + CGVP++S+SLNW Sbjct: 179 LFCGVPSMSISLNW 192
>tr|A7NWM5|A7NWM5_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019982001 PE=4 SV=1 Length = 308
Score = 166 bits (421), Expect = 7e-40 Identities = 83/135 (61%), Positives = 101/135 (74%) Frame = +2
Query: 179 DRPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVARSI 358 +RP ++VTNDDGI APGLRALV LV + +V VCAP ++S VSHS+T L + + Sbjct: 9 NRPKIMVTNDDGIDAPGLRALVQVLVSTNLYEVLVCAPDSEKSAVSHSITWIHALAVKRV 68
Query: 359 EIKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAGARE 538 EI+GA AYAVSGTPAD SL +S LFP I P LV+SGIN G NCGYHI YSGTVAGARE Sbjct: 69 EIEGATAYAVSGTPADSASLGISTTLFPSI-PDLVISGINMGSNCGYHIVYSGTVAGARE 127
Query: 539 AVICGVPAISLSLNW 583 A + G+P++S+S NW Sbjct: 128 AFLNGIPSVSVSYNW 142
>tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized protein At1g72880) OS=Arabidopsis thaliana GN=At1g72880 PE=2 SV=1 Length = 385
Score = 159 bits (402), Expect = 1e-37 Identities = 78/136 (57%), Positives = 99/136 (72%) Frame = +2
Query: 176 NDRPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVARS 355 + RP VLVTN DGI +PGL +LV ALV G V VCAP D+S +HS T E + S Sbjct: 58 DSRPIVLVTNGDGIDSPGLVSLVEALVLEGLYNVHVCAPQTDKSASAHSTTPGETIAVSS 117
Query: 356 IEIKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAGAR 535 +++KGA A+ VSGTP DC+SL LSG LF KP LV+SGIN+G +CG+ ++YSG VAG R Sbjct: 118 VKLKGATAFEVSGTPVDCISLGLSGALFAWSKPILVISGINQGSSCGHQMFYSGAVAGGR 177
Query: 536 EAVICGVPAISLSLNW 583 EA+I GVP++S+SLNW Sbjct: 178 EALISGVPSLSISLNW 193
>tr|B7E331|B7E331_ORYSJ cDNA clone:001-019-B07, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 305
Score = 156 bits (394), Expect = 9e-37 Identities = 77/133 (57%), Positives = 96/133 (72%) Frame = +2
Query: 185 PCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVARSIEI 364 P VLVTNDDGI APGLR LV LV + +V VCAP D+SGVSHS+T L + ++I Sbjct: 15 PVVLVTNDDGIDAPGLRFLVGQLVAARRYRVLVCAPDTDRSGVSHSITWRPALRCKRVDI 74
Query: 365 KGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAGAREAV 544 GA A+A SGTPADC SL +SG LF + P LV+SGIN G NCG H+ YSGTV GAREA Sbjct: 75 DGATAFAASGTPADCASLGISGKLFDGLVPDLVVSGINVGNNCGCHVIYSGTVGGAREAF 134
Query: 545 ICGVPAISLSLNW 583 + G+P++++S +W Sbjct: 135 LYGIPSLAMSYDW 147
>tr|A7PE57|A7PE57_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016539001 PE=4 SV=1 Length = 337
Score = 155 bits (392), Expect = 2e-36 Identities = 79/134 (58%), Positives = 97/134 (72%) Frame = +2
Query: 182 RPCVLVTNDDGIHAPGLRALVSALVDSGACQVFVCAPVRDQSGVSHSLTIHENLVARSIE 361 R VLVTN DGI +PGL +LV AL+ V VCAP D+S HS+T+ E L A S E Sbjct: 41 RAVVLVTNGDGIESPGLTSLVQALLREPRFHVHVCAPQSDKSVSGHSMTVQETLTACSAE 100
Query: 362 IKGAIAYAVSGTPADCVSLSLSGVLFPPIKPSLVLSGINKGCNCGYHIYYSGTVAGAREA 541 I GA AY VSGTPADCVSL+LSG LF KP LV+ GINKG + G ++++SG VAGAREA Sbjct: 101 IGGATAYEVSGTPADCVSLALSGALFSWSKPVLVICGINKGSSYGLNMFHSGAVAGAREA 160
Query: 542 VICGVPAISLSLNW 583 ++CGVPA+ +S+NW Sbjct: 161 LLCGVPALCISMNW 174
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