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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960442
Clone id TST39A01NGRL0007_G22
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_G22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTTTCTT
CAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAGGTAG
GCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACAGCC
CCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCAGCT
ATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACC
CTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGG
GAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGG
CCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCA
ACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTCTCA
TGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATCCCA
TCTACCCTGGTGGCTCCTTTGACCCCTTGGGCCTGGCAGACGACCCGGAGGCATTTGCTG
AGCTG
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 188
Score (bit) 348.0
E-value 1.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960442|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_G22, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   348   1e-95
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   345   9e-95
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   345   2e-94
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   345   2e-94
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   344   2e-94
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   343   6e-94
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   343   6e-94
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   342   8e-94
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   342   8e-94
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   342   1e-93
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   342   1e-93
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   342   1e-93
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   342   1e-93
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   340   4e-93
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   340   5e-93
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   338   1e-92
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   338   1e-92
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   338   1e-92
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   338   2e-92
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   338   2e-92
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   337   3e-92
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   337   3e-92
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   337   3e-92
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   337   3e-92
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   336   6e-92
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   335   1e-91
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   335   1e-91
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   335   1e-91
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   335   2e-91
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   334   2e-91

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  348 bits (893), Expect = 1e-95
 Identities = 164/188 (87%), Positives = 176/188 (93%), Gaps = 4/188 (2%)
 Frame = +3

Query: 114 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 281
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 282 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 461
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 462 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 641
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 642 DPEAFAEL 665
           DPEAFAEL
Sbjct: 199 DPEAFAEL 206


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  345 bits (886), Expect = 9e-95
 Identities = 170/200 (85%), Positives = 185/200 (92%), Gaps = 3/200 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 245
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 246 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 425
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 426 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 605
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192

Query: 606 PGGSFDPLGLADDPEAFAEL 665
           PGGSFDPLGLADDP+ FAEL
Sbjct: 193 PGGSFDPLGLADDPDTFAEL 212



 Score = 30.8 bits (68), Expect = 6.7
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 255 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 404
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  345 bits (884), Expect = 2e-94
 Identities = 172/193 (89%), Positives = 175/193 (90%), Gaps = 1/193 (0%)
 Frame = +3

Query: 90  KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 266
           KP +ELS KVG  GEARV M    SK+ S S WYG DR  YLGPFSG  PSYL GEFPGD
Sbjct: 18  KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 267 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 446
           YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 447 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 626
           IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 627 LGLADDPEAFAEL 665
           LGLADDPEAFAEL
Sbjct: 197 LGLADDPEAFAEL 209


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  345 bits (884), Expect = 2e-94
 Identities = 165/181 (91%), Positives = 172/181 (95%), Gaps = 2/181 (1%)
 Frame = +3

Query: 129 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 302
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 303 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 482
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 483 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 662
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAE
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAE 208

Query: 663 L 665
           L
Sbjct: 209 L 209


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  344 bits (883), Expect = 2e-94
 Identities = 163/184 (88%), Positives = 171/184 (92%), Gaps = 4/184 (2%)
 Frame = +3

Query: 126 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 293
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 294 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 473
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 474 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 653
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 207

Query: 654 FAEL 665
           FAEL
Sbjct: 208 FAEL 211


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  343 bits (879), Expect = 6e-94
 Identities = 163/183 (89%), Positives = 171/183 (93%), Gaps = 4/183 (2%)
 Frame = +3

Query: 129 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 296
           G  RV+MRKT +K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 297 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 476
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 477 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 656
           GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 208

Query: 657 AEL 665
           AEL
Sbjct: 209 AEL 211


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  343 bits (879), Expect = 6e-94
 Identities = 163/181 (90%), Positives = 171/181 (94%), Gaps = 2/181 (1%)
 Frame = +3

Query: 129 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 302
           G A+ +MRKT SKS  S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP
Sbjct: 19  GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 303 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 482
           ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 79  ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 483 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 662
           PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEAFAE
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAE 198

Query: 663 L 665
           L
Sbjct: 199 L 199


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  342 bits (878), Expect = 8e-94
 Identities = 167/200 (83%), Positives = 179/200 (89%), Gaps = 3/200 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 245
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 246 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 425
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 426 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 605
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189

Query: 606 PGGSFDPLGLADDPEAFAEL 665
           PGGSFDPLGLA+DPEAFAEL
Sbjct: 190 PGGSFDPLGLAEDPEAFAEL 209


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  342 bits (878), Expect = 8e-94
 Identities = 168/201 (83%), Positives = 177/201 (88%), Gaps = 4/201 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 242
           G+AV  P S   +     G  + +MRKTV+K    SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 15  GKAVNVPSSSQIT-----GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69

Query: 243 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 422
           L GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEA
Sbjct: 70  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

Query: 423 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 602
           VWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPL 189

Query: 603 YPGGSFDPLGLADDPEAFAEL 665
           YPGGSFDPLGLADDPEAFAEL
Sbjct: 190 YPGGSFDPLGLADDPEAFAEL 210


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
          Length = 267

 Score =  342 bits (877), Expect = 1e-93
 Identities = 163/183 (89%), Positives = 170/183 (92%), Gaps = 4/183 (2%)
 Frame = +3

Query: 129 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 296
           G  +  MRKTV+K    SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88

Query: 297 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 476
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 477 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 656
           GNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 208

Query: 657 AEL 665
           AEL
Sbjct: 209 AEL 211
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 197
Score (bit) 357.0
E-value 5.0e-97
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960442|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_G22, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   357   5e-97
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   353   4e-96
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   352   9e-96
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   352   9e-96
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   352   2e-95
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   351   2e-95
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   348   1e-94
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   348   1e-94
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   348   2e-94
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   348   2e-94
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   347   5e-94
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   347   5e-94
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   346   6e-94
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   345   1e-93
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   345   1e-93
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   345   1e-93
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   345   1e-93
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   345   1e-93
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   345   1e-93
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   345   1e-93
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   345   1e-93
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   345   2e-93
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   344   2e-93
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   344   2e-93
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   344   3e-93
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   344   3e-93
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   343   4e-93
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   343   4e-93
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   343   4e-93
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   343   5e-93

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  357 bits (915), Expect = 5e-97
 Identities = 173/197 (87%), Positives = 183/197 (92%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 254
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 255 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 434
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 435 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 614
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192

Query: 615 SFDPLGLADDPEAFAEL 665
           SFDPLGLADDP+ FAEL
Sbjct: 193 SFDPLGLADDPDTFAEL 209


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  353 bits (907), Expect = 4e-96
 Identities = 172/202 (85%), Positives = 184/202 (91%), Gaps = 5/202 (2%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 239
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 240 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 419
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 420 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 599
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 600 IYPGGSFDPLGLADDPEAFAEL 665
           IYPGGSFDPLGLADDP+AFAEL
Sbjct: 193 IYPGGSFDPLGLADDPDAFAEL 214


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  352 bits (904), Expect = 9e-96
 Identities = 173/199 (86%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 248
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 249 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 428
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 429 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 608
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 609 GGSFDPLGLADDPEAFAEL 665
           GGSFDPLGLADDP+ FAEL
Sbjct: 194 GGSFDPLGLADDPDTFAEL 212


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  352 bits (904), Expect = 9e-96
 Identities = 173/199 (86%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 248
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 249 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 428
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 429 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 608
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 609 GGSFDPLGLADDPEAFAEL 665
           GGSFDPLGLADDP+ FAEL
Sbjct: 194 GGSFDPLGLADDPDTFAEL 212


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  352 bits (902), Expect = 2e-95
 Identities = 172/199 (86%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 248
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 249 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 428
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 429 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 608
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 609 GGSFDPLGLADDPEAFAEL 665
           GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  351 bits (901), Expect = 2e-95
 Identities = 171/199 (85%), Positives = 185/199 (92%), Gaps = 2/199 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 248
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 249 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 428
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 429 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 608
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 609 GGSFDPLGLADDPEAFAEL 665
           GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  348 bits (894), Expect = 1e-94
 Identities = 170/199 (85%), Positives = 184/199 (92%), Gaps = 2/199 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 248
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 249 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 428
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 429 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 608
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 609 GGSFDPLGLADDPEAFAEL 665
           GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  348 bits (894), Expect = 1e-94
 Identities = 172/199 (86%), Positives = 183/199 (91%), Gaps = 2/199 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 248
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 249 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 428
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 429 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 608
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192

Query: 609 GGSFDPLGLADDPEAFAEL 665
           GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211


>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 262

 Score =  348 bits (893), Expect = 2e-94
 Identities = 164/188 (87%), Positives = 176/188 (93%), Gaps = 4/188 (2%)
 Frame = +3

Query: 114 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 281
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 282 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 461
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 462 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 641
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 642 DPEAFAEL 665
           DPEAFAEL
Sbjct: 199 DPEAFAEL 206


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  348 bits (892), Expect = 2e-94
 Identities = 167/199 (83%), Positives = 186/199 (93%), Gaps = 2/199 (1%)
 Frame = +3

Query: 75  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 248
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 249 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 428
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 429 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 608
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 609 GGSFDPLGLADDPEAFAEL 665
           GGSFDPLGLADDP+ FAEL
Sbjct: 193 GGSFDPLGLADDPDTFAEL 211