DK960446 |
Clone id |
TST39A01NGRL0007_H02 |
Library |
TST39 |
Length |
642 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_H02. 5' end sequence. |
Accession |
DK960446 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CCCCTTTGTGTCCATAACTTTCTGATGGACCCTATGGAAGAGCCAGCACTCTTCTCCTCG AAGGCCAGTCTGCAGAAGGGTTCGAGGAAGATCGTGAAAAAGCATTCCTTTGTCGCCGAG TCTCTGCGCACGTGTGGTGAGGATGACAACCAAAGCTTCAGCTACCTGGGTCTCTCCGAG TGGCTGGCTGACGCTTGCTCGCAGATGGGCCTGAAACGCCCCACCCCTGTTCAGAGGAGC TGCATTCCTCAAATCCTCAATGGCCTCGATGTCCTGGGCCTTGCTCAAACAGGCAGTGGT AAAACCGCCGCTTTTGCTTTACCCATTCTCCATAGACTGGCACAAAGTCTTTATGGTGTC TTCGCTTTGGTACTTACGCCAACACGAGAACTGGCTTTTCAGCTCTCTGATCAATTCAAG GCCCTAGGTTCTGGCCTCAATCTCCGTTGCTCTGTCATTATTGGTGGCCTTGACATGATT GAACAGGCCAAAGCACTGATGCGGCGCCCACATGTTGTTATCGCTACCCCAGGACGACTT GCACATTTGCTCAAGAATGACCCAGATATTGCGTCTGTTTTTAAGAGGATCAAGTTTCTT GTTTTGGATGAAGCTGACCGCATCCTTGATTTTGGCTTTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SA27 |
Definition |
sp|Q9SA27|RH36_ARATH Putative DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana |
Align length |
163 |
Score (bit) |
238.0 |
E-value |
2.0e-62 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QMH0 |
Definition |
tr|A7QMH0|A7QMH0_VITVI Chromosome chr19 scaffold_126, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
165 |
Score (bit) |
240.0 |
E-value |
6.0e-62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960446|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_H02, 5' (642 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QMH0|A7QMH0_VITVI Chromosome chr19 scaffold_126, whole geno... 240 6e-62 tr|A5B008|A5B008_VITVI Putative uncharacterized protein OS=Vitis... 240 6e-62 tr|A9TB38|A9TB38_PHYPA Predicted protein OS=Physcomitrella paten... 238 2e-61 tr|A2YP05|A2YP05_ORYSI Putative uncharacterized protein OS=Oryza... 221 2e-56 tr|A8IS61|A8IS61_CHLRE Predicted protein (Fragment) OS=Chlamydom... 202 1e-50 tr|Q9N5M1|Q9N5M1_CAEEL Putative uncharacterized protein OS=Caeno... 197 6e-49 tr|Q2WF63|Q2WF63_CAEEL Putative uncharacterized protein OS=Caeno... 197 6e-49 tr|Q6P1S5|Q6P1S5_XENTR DEAD (Asp-Glu-Ala-Asp) box polypeptide 49... 194 5e-48 tr|B3RRU3|B3RRU3_TRIAD Putative uncharacterized protein OS=Trich... 193 7e-48 tr|A7RZV2|A7RZV2_NEMVE Predicted protein OS=Nematostella vectens... 193 7e-48 tr|Q9NVY6|Q9NVY6_HUMAN cDNA FLJ10432 fis, clone NT2RP1000470, we... 193 7e-48 tr|Q800A3|Q800A3_XENLA Ddx49-A-prov protein (Fragment) OS=Xenopu... 193 9e-48 tr|Q3UTV0|Q3UTV0_MOUSE Putative uncharacterized protein OS=Mus m... 192 1e-47 tr|A8K7A1|A8K7A1_HUMAN cDNA FLJ77346, highly similar to Homo sap... 192 2e-47 tr|Q5ZLA8|Q5ZLA8_CHICK Putative uncharacterized protein OS=Gallu... 191 3e-47 tr|B0BNK0|B0BNK0_RAT Ddx49 protein OS=Rattus norvegicus GN=Ddx49... 191 3e-47 tr|A8WVJ8|A8WVJ8_CAEBR Putative uncharacterized protein OS=Caeno... 189 1e-46 tr|Q4SF12|Q4SF12_TETNG Chromosome 1 SCAF14609, whole genome shot... 189 2e-46 tr|Q7ZUT9|Q7ZUT9_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 49... 188 2e-46 tr|Q6DI28|Q6DI28_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 49... 188 2e-46 tr|Q5RGB7|Q5RGB7_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 49... 188 2e-46 tr|Q6INF8|Q6INF8_XENLA Ddx49-A-prov protein (Fragment) OS=Xenopu... 187 4e-46 tr|A7SRU4|A7SRU4_NEMVE Predicted protein OS=Nematostella vectens... 187 6e-46 tr|A4RSU9|A4RSU9_OSTLU Ddx49-related DEAD box helicase superfami... 186 1e-45 tr|Q4CL56|Q4CL56_TRYCR ATP-dependent DEAD/H RNA helicase, putati... 185 2e-45 tr|Q4CT42|Q4CT42_TRYCR ATP-dependent RNA helicase, putative OS=T... 184 4e-45 tr|Q6INR0|Q6INR0_XENLA MGC81303 protein OS=Xenopus laevis GN=ddx... 183 7e-45 tr|Q29NS3|Q29NS3_DROPS GA21647 OS=Drosophila pseudoobscura pseud... 182 1e-44 tr|B4GJI5|B4GJI5_DROPE GL25891 OS=Drosophila persimilis GN=GL258... 182 1e-44 tr|B4P6Z5|B4P6Z5_DROYA GE12898 OS=Drosophila yakuba GN=GE12898 P... 181 3e-44
>tr|A7QMH0|A7QMH0_VITVI Chromosome chr19 scaffold_126, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002064001 PE=3 SV=1 Length = 489
Score = 240 bits (612), Expect = 6e-62 Identities = 115/165 (69%), Positives = 143/165 (86%) Frame = +1
Query: 148 NQSFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPI 327 + +F+ LGL+EW AC ++G++RPTPVQ CIP+IL G DVLGLAQTGSGKTAAFALPI Sbjct: 50 SSTFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPI 109
Query: 328 LHRLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRR 507 LHRLA+ +GVFALV+TPTRELA+QL++QF+ALGS L+LRC+V++GG+DMI QA+ LM+R Sbjct: 110 LHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQR 169
Query: 508 PHVVIATPGRLAHLLKNDPDIASVFKRIKFLVLDEADRILDFGFE 642 PHVVIATPGR+ LL+ +PDI +VF R KFLVLDEADR+LD GFE Sbjct: 170 PHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFE 214
>tr|A5B008|A5B008_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021046 PE=3 SV=1 Length = 592
Score = 240 bits (612), Expect = 6e-62 Identities = 115/165 (69%), Positives = 143/165 (86%) Frame = +1
Query: 148 NQSFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPI 327 + +F+ LGL+EW AC ++G++RPTPVQ CIP+IL G DVLGLAQTGSGKTAAFALPI Sbjct: 153 SSTFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPI 212
Query: 328 LHRLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRR 507 LHRLA+ +GVFALV+TPTRELA+QL++QF+ALGS L+LRC+V++GG+DMI QA+ LM+R Sbjct: 213 LHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQR 272
Query: 508 PHVVIATPGRLAHLLKNDPDIASVFKRIKFLVLDEADRILDFGFE 642 PHVVIATPGR+ LL+ +PDI +VF R KFLVLDEADR+LD GFE Sbjct: 273 PHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFE 317
>tr|A9TB38|A9TB38_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_220567 PE=3 SV=1 Length = 482
Score = 238 bits (607), Expect = 2e-61 Identities = 124/209 (59%), Positives = 153/209 (73%), Gaps = 3/209 (1%) Frame = +1
Query: 25 MDPMEEPALFSS---KASLQKGSRKIVKKHSFVAESLRTCGEDDNQSFSYLGLSEWLADA 195 M+ P LFS KA++ S K + + E + E +F LGL++WL A Sbjct: 1 MESSNAPPLFSKRKPKAAVAAASNKKTAAPALLDEDAKAAKEIT--TFEGLGLTDWLVRA 58
Query: 196 CSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPILHRLAQSLYGVFALVL 375 C ++G+KRPT VQ+ C+PQIL G DV GLAQTGSGKTAAFALPIL +LA++ YGVFALVL Sbjct: 59 CKELGMKRPTLVQQGCVPQILAGKDVFGLAQTGSGKTAAFALPILQKLAENPYGVFALVL 118
Query: 376 TPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRRPHVVIATPGRLAHLLK 555 TPTRELAFQ+SDQFKALGS +NLR +V++GG+DM QAKALM+RPH+VIATPGRL Sbjct: 119 TPTRELAFQISDQFKALGSEVNLRSTVVVGGMDMTTQAKALMQRPHIVIATPGRLRDHFM 178
Query: 556 NDPDIASVFKRIKFLVLDEADRILDFGFE 642 NDP I VF + K+LVLDEADR++D GFE Sbjct: 179 NDPGIPDVFAKAKYLVLDEADRLMDVGFE 207
>tr|A2YP05|A2YP05_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26993 PE=3 SV=1 Length = 501
Score = 221 bits (564), Expect = 2e-56 Identities = 107/163 (65%), Positives = 128/163 (78%) Frame = +1
Query: 154 SFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPILH 333 +F+ LGLS+WL D C +G++ PT VQR CIP+ L G DVLG+A+TGSGKTAAFALPILH Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILH 137
Query: 334 RLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRRPH 513 RL + YGV AL L PTRELA QL++QF+ALG+ L LRC IGG D + QAK L RRPH Sbjct: 138 RLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPH 197
Query: 514 VVIATPGRLAHLLKNDPDIASVFKRIKFLVLDEADRILDFGFE 642 VV+ATPGR+A L+ +DPD+A VF R KFLVLDEADR+LD FE Sbjct: 198 VVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFE 240
>tr|A8IS61|A8IS61_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_128577 PE=3 SV=1 Length = 488
Score = 202 bits (514), Expect = 1e-50 Identities = 103/162 (63%), Positives = 126/162 (77%) Frame = +1
Query: 157 FSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPILHR 336 F LGLSEWL C +G+ +PT VQR CIP IL G DV+GLAQTGSGKTAAFALPIL Sbjct: 107 FKGLGLSEWLCGVCKSLGMSQPTDVQRGCIPAILKGRDVIGLAQTGSGKTAAFALPILQA 166
Query: 337 LAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRRPHV 516 LA+ YGVFALVLTPTRELA Q+S+QF+ALG+G+ L+ V+IGG+DM +QA+ L +RPHV Sbjct: 167 LAKDPYGVFALVLTPTRELAVQISEQFRALGAGMRLKELVVIGGVDMQQQARELAKRPHV 226
Query: 517 VIATPGRLAHLLKNDPDIASVFKRIKFLVLDEADRILDFGFE 642 V+ATPGRLA + + +A+ R +FLVLDEADR+LD FE Sbjct: 227 VVATPGRLADWVMS--GLAAGMARCRFLVLDEADRVLDSTFE 266
>tr|Q9N5M1|Q9N5M1_CAEEL Putative uncharacterized protein OS=Caenorhabditis elegans GN=H20J04.4 PE=2 SV=2 Length = 488
Score = 197 bits (500), Expect = 6e-49 Identities = 94/161 (58%), Positives = 125/161 (77%), Gaps = 1/161 (0%) Frame = +1
Query: 151 QSFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPIL 330 + FS LG+ W+ M +K TPVQ +CIP+IL G D+LG A+TG+GKT AFA+PIL Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 331 HRLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRRP 510 +L+ YG++AL+LTPTRELAFQ+++QF ALG + L+CSVI+GG +I QA+ L RP Sbjct: 149 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 208
Query: 511 HVVIATPGRLAHLLKNDPD-IASVFKRIKFLVLDEADRILD 630 HVV+ATPGRLA L+++DPD IA VFK+I+F VLDEADR+L+ Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLE 249
>tr|Q2WF63|Q2WF63_CAEEL Putative uncharacterized protein OS=Caenorhabditis elegans GN=H20J04.4 PE=2 SV=1 Length = 561
Score = 197 bits (500), Expect = 6e-49 Identities = 94/161 (58%), Positives = 125/161 (77%), Gaps = 1/161 (0%) Frame = +1
Query: 151 QSFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPIL 330 + FS LG+ W+ M +K TPVQ +CIP+IL G D+LG A+TG+GKT AFA+PIL Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 331 HRLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRRP 510 +L+ YG++AL+LTPTRELAFQ+++QF ALG + L+CSVI+GG +I QA+ L RP Sbjct: 149 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 208
Query: 511 HVVIATPGRLAHLLKNDPD-IASVFKRIKFLVLDEADRILD 630 HVV+ATPGRLA L+++DPD IA VFK+I+F VLDEADR+L+ Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLE 249
>tr|Q6P1S5|Q6P1S5_XENTR DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 OS=Xenopus tropicalis GN=ddx49 PE=2 SV=1 Length = 479
Score = 194 bits (492), Expect = 5e-48 Identities = 93/162 (57%), Positives = 125/162 (77%) Frame = +1
Query: 151 QSFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPIL 330 + FS LGLS WL D CSQ+G+ +P+PVQ +CIP IL G D +G A+TGSGKTAAF LPIL Sbjct: 2 EGFSRLGLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPIL 61
Query: 331 HRLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRRP 510 +L++ +G+F LVLTPTRELA+Q+++QF+ LG L L+ +I+GG+DM+ QA L R+P Sbjct: 62 QKLSEDPFGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKP 121
Query: 511 HVVIATPGRLAHLLKNDPDIASVFKRIKFLVLDEADRILDFG 636 HVVIATPGRLA +++ + K+I+FLVLDEADR+L+ G Sbjct: 122 HVVIATPGRLADHIRSSNTFS--IKKIRFLVLDEADRLLEQG 161
>tr|B3RRU3|B3RRU3_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_21982 PE=4 SV=1 Length = 435
Score = 193 bits (491), Expect = 7e-48 Identities = 95/164 (57%), Positives = 124/164 (75%) Frame = +1
Query: 148 NQSFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPI 327 N SF+ LGL+ WL C +GL + T VQ CIP IL G + +G A+TGSGKTAAFALPI Sbjct: 4 NSSFADLGLNTWLVKQCRAIGLAKATAVQEKCIPPILQGQNCIGCAKTGSGKTAAFALPI 63
Query: 328 LHRLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRR 507 L LA+ +G++AL+LTPTRELAFQL+DQF+A G + +R +++IGGLD+I Q+ AL ++ Sbjct: 64 LQNLAKEPFGIYALILTPTRELAFQLADQFRAFGKPIGMRDAIVIGGLDIISQSIALSKK 123
Query: 508 PHVVIATPGRLAHLLKNDPDIASVFKRIKFLVLDEADRILDFGF 639 PH+VIATPGRLA L+ ND + F +IKFLVLDEADR+L+ F Sbjct: 124 PHIVIATPGRLADLIDNDSKVH--FSKIKFLVLDEADRLLEASF 165
>tr|A7RZV2|A7RZV2_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g164655 PE=3 SV=1 Length = 436
Score = 193 bits (491), Expect = 7e-48 Identities = 96/162 (59%), Positives = 125/162 (77%) Frame = +1
Query: 154 SFSYLGLSEWLADACSQMGLKRPTPVQRSCIPQILNGLDVLGLAQTGSGKTAAFALPILH 333 SF+ LGL++WL C MG+K+PT +Q +C+P IL G D +G A+TGSGKTAAFALPIL Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 334 RLAQSLYGVFALVLTPTRELAFQLSDQFKALGSGLNLRCSVIIGGLDMIEQAKALMRRPH 513 +L YG+FA+VLTPTRELAFQ++DQFK LG + L+ +VI+GGLDM++QA +L +PH Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPH 127
Query: 514 VVIATPGRLAHLLKNDPDIASVFKRIKFLVLDEADRILDFGF 639 VVIATPGRLA +K+ + K+I+FLVLDEADR+LD F Sbjct: 128 VVIATPGRLADHIKSTDTLN--LKKIQFLVLDEADRLLDPSF 167
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