DK960447 |
Clone id |
TST39A01NGRL0007_H03 |
Library |
TST39 |
Length |
601 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_H03. 5' end sequence. |
Accession |
DK960447 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL108Contig1 |
Sequence |
GTGCATCTTCTTCTGGCGAAAGAGGCGGCAGCATGATGCACGTCAGTTTCTACCGCAACT ATGGAAAGACGTTCAAGAAGCCCCGCCGTCCTTATGAGAAGGAGCGGCTCGATGCAGAAC TGAAGCTCGTAGGGGAATATGGACTCCGTAACAAGAGAGAACTGTGGAGAGTTCAATATG CATTGAGCCGTATCCGCAACAATGCCCGAATGTTGCTTACACTCGATGAGAAGAACCCAC GCAGAATCTTCGAGGGAGAGGCTCTTCTACGTCGCATGTTCAGATATGGTCTTCTAGATG AAAGCCAAAACAAGCTCGATTATGTTTTGGCATTGACAGTTGAGAACTTCTTGGAACGCC GTCTGCAGACTCTTGTCTTCAAGTCGGGCATGGCCAAATCGATTCATCATGCCCGAGTGC TTATCAAGCAGAGGCATATTAGGGTTGGCAAGCAAGTTGTCAATGTTGCCTCTTTTCTGG TGAGAGTGGATTCACAGAAGCATATTGATTTTGCACTGTCGAGTCCCTTCGGTGGCGGTA GACCTGGCCGTGTGAAGAGAAGGAACATGAAGGCTGCCTCTTACAAGGCTGCTGGTGGTG A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LXG1 |
Definition |
sp|Q9LXG1|RS91_ARATH 40S ribosomal protein S9-1 OS=Arabidopsis thaliana |
Align length |
189 |
Score (bit) |
336.0 |
E-value |
5.0e-92 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PMS9 |
Definition |
tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence (Chromosome chr17 scaffold_101, whole genome shotgun sequence) OS=Vitis vinifera |
Align length |
189 |
Score (bit) |
347.0 |
E-value |
2.0e-94 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960447|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_H03, 5' (601 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genom... 347 2e-94 tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=So... 347 4e-94 tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solan... 345 9e-94 tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Popul... 345 9e-94 tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Popul... 345 9e-94 tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea... 345 1e-93 tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medic... 344 2e-93 tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea... 344 2e-93 tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome... 344 2e-93 tr|A9SLM0|A9SLM0_PHYPA Predicted protein OS=Physcomitrella paten... 343 3e-93 tr|A9RK26|A9RK26_PHYPA Predicted protein OS=Physcomitrella paten... 343 3e-93 tr|A9TG44|A9TG44_PHYPA Predicted protein OS=Physcomitrella paten... 343 6e-93 tr|A5HSG2|A5HSG2_ARTAN Putative 40S ribosomal protein S9 OS=Arte... 343 6e-93 tr|Q6H8J2|Q6H8J2_CATRO 40S ribosomal protein S9 OS=Catharanthus ... 342 7e-93 tr|B3TM27|B3TM27_ELAGV Ribosomal protein OS=Elaeis guineensis va... 342 1e-92 tr|A9RKT7|A9RKT7_PHYPA Predicted protein OS=Physcomitrella paten... 342 1e-92 tr|A9PJ59|A9PJ59_POPJC Putative uncharacterized protein OS=Popul... 341 2e-92 tr|A9P9U8|A9P9U8_POPTR Putative uncharacterized protein OS=Popul... 341 2e-92 tr|A9PA82|A9PA82_POPTR Putative uncharacterized protein OS=Popul... 338 1e-91 tr|B3TM34|B3TM34_ELAGV 40S ribosomal protein S9 OS=Elaeis guinee... 337 3e-91 tr|A9S7K2|A9S7K2_PHYPA Predicted protein OS=Physcomitrella paten... 336 7e-91 tr|Q676Y9|Q676Y9_HYAOR 40S ribosomal protein S9 OS=Hyacinthus or... 328 1e-88 tr|Q2R1J8|Q2R1J8_ORYSJ 40S ribosomal protein S9, putative, expre... 324 2e-87 tr|A2ZFU3|A2ZFU3_ORYSI Putative uncharacterized protein OS=Oryza... 324 2e-87 tr|B6SZS2|B6SZS2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 321 2e-86 tr|B6T7B2|B6T7B2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 319 7e-86 tr|B6T8L0|B6T8L0_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 317 3e-85 tr|B6TH64|B6TH64_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 316 7e-85 tr|Q2R1J7|Q2R1J7_ORYSJ 40S ribosomal protein S9, putative, expre... 314 2e-84 tr|A8JGF8|A8JGF8_CHLRE Ribosomal protein S9, component of cytoso... 310 3e-83
>tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence (Chromosome chr17 scaffold_101, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00000124001 PE=3 SV=1 Length = 197
Score = 347 bits (891), Expect = 2e-94 Identities = 173/189 (91%), Positives = 182/189 (96%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKNPRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLI+QRHIRVG+QVVN+ SFLVR+DSQKHIDF+L+SP GGGRPGRVKR+N K Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFLVRMDSQKHIDFSLTSPLGGGRPGRVKRKNQK 180
Query: 573 AASYKAAGG 599 AA+ KAAGG Sbjct: 181 AAAKKAAGG 189
>tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum GN=SDM1_52t00012 PE=3 SV=1 Length = 197
Score = 347 bits (889), Expect = 4e-94 Identities = 173/189 (91%), Positives = 184/189 (97%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N K Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
Query: 573 AASYKAAGG 599 +A+ KAAGG Sbjct: 181 SAAKKAAGG 189
>tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 197
Score = 345 bits (886), Expect = 9e-94 Identities = 172/189 (91%), Positives = 184/189 (97%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N K Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
Query: 573 AASYKAAGG 599 +A+ KAAGG Sbjct: 181 SAAKKAAGG 189
>tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 197
Score = 345 bits (886), Expect = 9e-94 Identities = 173/189 (91%), Positives = 182/189 (96%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLIKQRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N K Sbjct: 121 AKSIHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
Query: 573 AASYKAAGG 599 AAS KAAGG Sbjct: 181 AASKKAAGG 189
>tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 197
Score = 345 bits (886), Expect = 9e-94 Identities = 173/189 (91%), Positives = 182/189 (96%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLIKQRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N K Sbjct: 121 AKSIHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
Query: 573 AASYKAAGG 599 AAS KAAGG Sbjct: 181 AASKKAAGG 189
>tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 345 bits (884), Expect = 1e-93 Identities = 171/189 (90%), Positives = 182/189 (96%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HV FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARM Sbjct: 1 MVHVVFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKNPRRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQSKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+N+K Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNLK 180
Query: 573 AASYKAAGG 599 AAS KAAGG Sbjct: 181 AASKKAAGG 189
>tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 197
Score = 344 bits (883), Expect = 2e-93 Identities = 169/189 (89%), Positives = 184/189 (97%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRNNAR Sbjct: 1 MVHVAFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNART 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKNPRRIFEGEALLRRMF++GLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGG PGRVKR+N+K Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNLK 180
Query: 573 AASYKAAGG 599 AA+ KA+GG Sbjct: 181 AAAKKASGG 189
>tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 344 bits (883), Expect = 2e-93 Identities = 171/188 (90%), Positives = 181/188 (96%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARM Sbjct: 1 MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKNPRRIFEGEALLRRM RYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+NMK Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNMK 180
Query: 573 AASYKAAG 596 AAS KA G Sbjct: 181 AASKKAGG 188
>tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037003001 PE=3 SV=1 Length = 197
Score = 344 bits (883), Expect = 2e-93 Identities = 171/189 (90%), Positives = 182/189 (96%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKNPRRIFEGEALLRRM +YGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNKYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRV+SQKHIDFA +SP GGGRPGRVKR+N+K Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVESQKHIDFANTSPLGGGRPGRVKRKNLK 180
Query: 573 AASYKAAGG 599 AA+ KAAGG Sbjct: 181 AAAKKAAGG 189
>tr|A9SLM0|A9SLM0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_213657 PE=3 SV=1 Length = 198
Score = 343 bits (881), Expect = 3e-93 Identities = 171/189 (90%), Positives = 183/189 (96%) Frame = +3
Query: 33 MMHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 212 M+HV+ +RNYGKTFKKPRRP+EKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM Sbjct: 1 MVHVASFRNYGKTFKKPRRPFEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 60
Query: 213 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 392 LLTLDEKN RRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNTRRIFEGEALLRRMNRYGLLDENQSKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 393 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNMK 572 AKSIHHARVLIKQRHIRVGKQ+V+V SF+VRVDSQKH+DFALSSP GGGRPGRVKR+NMK Sbjct: 121 AKSIHHARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHVDFALSSPLGGGRPGRVKRKNMK 180
Query: 573 AASYKAAGG 599 AAS KA+GG Sbjct: 181 AASKKASGG 189
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