| DK960448 |
| Clone id |
TST39A01NGRL0007_H04 |
| Library |
TST39 |
| Length |
705 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_H04. 5' end sequence. |
| Accession |
DK960448 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL1359Contig1 |
| Sequence |
CTGCTGCTTCGCTCTCGTCCACTTCGATCGAGCTCCATTAAACCCCTTCCCAAATGGCAG CCGTAGCTTTGAACATACCAAACCCTAATGTTGGGCCTGCAGATCAGCTAAGAGTGTCAA AAAGGATTGGCCTTTTTCAGCCCTGCCTGCCCTCAATCAGCATCAGCAGCAAGATAACAA GAAGCTCTGTATGCATCAGCTCTGTATGCATCGGTGAGCTTACGAGCATGCCTGGTGGCA ACTACTTTAACTCGCTACAATCAAGACATGGGATGATTTCCTCTGTTTCTAGCACGGGTT CTACTGCAGTCACGAAGACGGAGACAGAGACAAAAACGGTAGAAGAAGAACCGACGGTTT CCGAGGCTTCACCTCCTCGTGAACCTGAACGGGACTTTGCAGGCACAAAGTATATTCCAA TCTACGTAATGCTTCCGCTAGGTGTCATAACGGAGCAAAACACAGTGGACAACCCTGACA AAGTTTTACAAGATTTTAAAACTCTGAAGTCGGCGAAAGTGGATGGGGTTATGGTTGATT GCTGGTGGGGTCTTGTTGAGTCCGAGAAACCGCAGAATTTCAACTGGTCAGGCTATAAGC ATCTCTTTTCCCTTGTGAAGGAGGCTGGCCTCAAATTACAGGTGGTGATGTCATTTCATC AATGCGGAGGAAATGTTGGCGATGACGTAAACATTCCTTTACCCC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O22585 |
| Definition |
sp|O22585|AMYB_MEDSA Beta-amylase OS=Medicago sativa |
| Align length |
98 |
| Score (bit) |
137.0 |
| E-value |
7.0e-32 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9SUV8 |
| Definition |
tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
106 |
| Score (bit) |
166.0 |
| E-value |
1.0e-39 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960448|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_H04, 5' (705 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella paten... 166 1e-39 tr|Q652P5|Q652P5_ORYSJ Os09g0569200 protein OS=Oryza sativa subs... 165 2e-39 tr|B8BEN8|B8BEN8_ORYSI Putative uncharacterized protein OS=Oryza... 165 2e-39 tr|A3C1P1|A3C1P1_ORYSJ Putative uncharacterized protein OS=Oryza... 165 2e-39 tr|A7PZF6|A7PZF6_VITVI Chromosome chr15 scaffold_40, whole genom... 164 7e-39 tr|B6SVZ0|B6SVZ0_MAIZE Beta-amylase OS=Zea mays PE=2 SV=1 162 1e-38 tr|A7PZF7|A7PZF7_VITVI Chromosome chr15 scaffold_40, whole genom... 154 4e-36 tr|Q0WU61|Q0WU61_ARATH Putative beta-amylase OS=Arabidopsis thal... 150 6e-35 tr|O80831|O80831_ARATH Putative beta-amylase OS=Arabidopsis thal... 150 6e-35 tr|Q9ZV58|Q9ZV58_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 141 5e-32 tr|Q8L762|Q8L762_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A... 141 5e-32 tr|Q9FQ07|Q9FQ07_CALSE Beta-amylase OS=Calystegia sepium PE=2 SV=1 137 9e-31 tr|Q9AT14|Q9AT14_CASCR Beta-amylase OS=Castanea crenata PE=2 SV=1 136 1e-30 tr|Q4U3W3|Q4U3W3_SOYBN Beta-amylase OS=Glycine max PE=3 SV=1 135 3e-30 tr|B7FLJ7|B7FLJ7_MEDTR Putative uncharacterized protein OS=Medic... 135 3e-30 tr|A5C2F9|A5C2F9_VITVI Beta-amylase OS=Vitis vinifera GN=VITISV_... 133 1e-29 tr|Q588Z5|Q588Z5_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyKza... 131 4e-29 tr|Q588Z4|Q588Z4_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyTkm... 131 4e-29 tr|Q588Z3|Q588Z3_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyDam... 131 4e-29 tr|Q45UE7|Q45UE7_SOYBN Beta-amylase OS=Glycine max PE=2 SV=1 131 4e-29 tr|Q42795|Q42795_SOYBN Beta-amylase OS=Glycine max PE=1 SV=1 131 4e-29 tr|O65258|O65258_ARATH F6N23.1 protein (Putative beta-amylase) O... 131 5e-29 tr|Q08335|Q08335_SECCE Beta-amylase OS=Secale cereale PE=2 SV=1 130 1e-28 tr|A7PXL0|A7PXL0_VITVI Beta-amylase OS=Vitis vinifera GN=GSVIVT0... 129 1e-28 tr|Q588Z6|Q588Z6_SOYBN Beta-amylase OS=Glycine max GN=Gm-BamyTkm... 128 3e-28 tr|Q9SYS1|Q9SYS1_MAIZE Beta-amylase OS=Zea mays GN=Amy2 PE=3 SV=1 128 4e-28 tr|Q9SBH7|Q9SBH7_HORVU Beta-amylase OS=Hordeum vulgare GN=beta-a... 127 7e-28 tr|Q9SB23|Q9SB23_HORVU Beta-amylase (Fragment) OS=Hordeum vulgar... 127 7e-28 tr|Q9FUK7|Q9FUK7_HORVU Beta-amylase (Fragment) OS=Hordeum vulgar... 127 7e-28 tr|Q9FUK6|Q9FUK6_HORVU Beta-amylase (Fragment) OS=Hordeum vulgar... 127 7e-28
>tr|A9SUV8|A9SUV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107034 PE=3 SV=1 Length = 552
Score = 166 bits (420), Expect = 1e-39 Identities = 74/106 (69%), Positives = 88/106 (83%) Frame = +3
Query: 387 ERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGLVESE 566 ERDF GT IPIYVMLPLG I N V NPD + Q F LK+A+VDGVMVDCWWGLVE + Sbjct: 108 ERDFTGTPNIPIYVMLPLGTIGHDNKVTNPDDLRQKFNALKTAEVDGVMVDCWWGLVEGK 167
Query: 567 KPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 +PQ+++WSGY+ LF++V++ GLKLQVVMSFHQCGGNVGDDV IP+P Sbjct: 168 EPQHYDWSGYRQLFTMVRDCGLKLQVVMSFHQCGGNVGDDVYIPIP 213
>tr|Q652P5|Q652P5_ORYSJ Os09g0569200 protein OS=Oryza sativa subsp. japonica GN=OJ1003_C09.20 PE=3 SV=1 Length = 533
Score = 165 bits (418), Expect = 2e-39 Identities = 72/111 (64%), Positives = 89/111 (80%) Frame = +3
Query: 372 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 551 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 82 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 141
Query: 552 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 VE+ +PQ +NW+GYK LF +++E LKLQVVMSFH+CGGNVGDDV+IPLP Sbjct: 142 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLP 192
>tr|B8BEN8|B8BEN8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32458 PE=4 SV=1 Length = 651
Score = 165 bits (418), Expect = 2e-39 Identities = 72/111 (64%), Positives = 89/111 (80%) Frame = +3
Query: 372 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 551 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 200 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 259
Query: 552 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 VE+ +PQ +NW+GYK LF +++E LKLQVVMSFH+CGGNVGDDV+IPLP Sbjct: 260 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLP 310
>tr|A3C1P1|A3C1P1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029213 PE=3 SV=1 Length = 597
Score = 165 bits (418), Expect = 2e-39 Identities = 72/111 (64%), Positives = 89/111 (80%) Frame = +3
Query: 372 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 551 PPR PERDFAGT Y+P+YVMLPLGV+ V + D ++ + LK+A VDGVMVDCWWG Sbjct: 135 PPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWG 194
Query: 552 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 VE+ +PQ +NW+GYK LF +++E LKLQVVMSFH+CGGNVGDDV+IPLP Sbjct: 195 NVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLP 245
>tr|A7PZF6|A7PZF6_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026861001 PE=3 SV=1 Length = 657
Score = 164 bits (414), Expect = 7e-39 Identities = 73/111 (65%), Positives = 90/111 (81%) Frame = +3
Query: 372 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 551 PP+ ERDFAGT YIP+YVMLPLGVI+ + + +PD +L+ + LKS VDGVMVDCWWG Sbjct: 206 PPKLQERDFAGTPYIPVYVMLPLGVISMKCELVDPDGLLKQLRILKSVNVDGVMVDCWWG 265
Query: 552 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 +VE+ PQ +NW+GYK LF +V+E LKLQVV+SFH+CGGNVGDDV IPLP Sbjct: 266 IVEAHAPQEYNWNGYKRLFQIVRELKLKLQVVLSFHECGGNVGDDVCIPLP 316
>tr|B6SVZ0|B6SVZ0_MAIZE Beta-amylase OS=Zea mays PE=2 SV=1 Length = 567
Score = 162 bits (411), Expect = 1e-38 Identities = 69/110 (62%), Positives = 89/110 (80%) Frame = +3
Query: 375 PREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGL 554 PR PERDFAGT Y+P+YVMLPLGV+ V + D+++ + LK++ VDGVMVDCWWG Sbjct: 117 PRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADELVGQLRVLKASGVDGVMVDCWWGN 176
Query: 555 VESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 VE+ KPQ +NW+GY+ LF +++E LKLQVVMSFH+CGGNVGDD++IPLP Sbjct: 177 VEAHKPQEYNWTGYRRLFQMIRELKLKLQVVMSFHECGGNVGDDISIPLP 226
>tr|A7PZF7|A7PZF7_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026862001 PE=3 SV=1 Length = 547
Score = 154 bits (390), Expect = 4e-36 Identities = 70/111 (63%), Positives = 85/111 (76%) Frame = +3
Query: 372 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 551 P + ERDFAGT Y+P+YVMLPL VI + +PD ++ + LKS VDGVMVDCWWG Sbjct: 97 PLKLQERDFAGTPYVPVYVMLPLSVININCELVDPDGLVHQLRILKSINVDGVMVDCWWG 156
Query: 552 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 +VE+ PQ +NWSGYK LF +V + LKLQVVMSFH+CGGNVGDDV+IPLP Sbjct: 157 IVEAHTPQVYNWSGYKRLFQIVHDIQLKLQVVMSFHECGGNVGDDVHIPLP 207
>tr|Q0WU61|Q0WU61_ARATH Putative beta-amylase OS=Arabidopsis thaliana GN=At2g45880 PE=2 SV=1 Length = 691
Score = 150 bits (380), Expect = 6e-35 Identities = 65/111 (58%), Positives = 85/111 (76%) Frame = +3
Query: 372 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 551 PP E+DF+GT Y+P+YVMLPLGVI + + + D +L+ + LKS VDGV VDCWWG Sbjct: 234 PPNLTEQDFSGTPYVPVYVMLPLGVINMKCELADRDGLLKHLRILKSIHVDGVKVDCWWG 293
Query: 552 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 +VE PQ +NW+GY+ LF +V++ LK+QV+MSFH+CGGNVGDDV IPLP Sbjct: 294 IVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLP 344
>tr|O80831|O80831_ARATH Putative beta-amylase OS=Arabidopsis thaliana GN=At2g45880 PE=2 SV=1 Length = 687
Score = 150 bits (380), Expect = 6e-35 Identities = 65/111 (58%), Positives = 85/111 (76%) Frame = +3
Query: 372 PPREPERDFAGTKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWG 551 PP E+DF+GT Y+P+YVMLPLGVI + + + D +L+ + LKS VDGV VDCWWG Sbjct: 234 PPNLTEQDFSGTPYVPVYVMLPLGVINMKCELADRDGLLKHLRILKSIHVDGVKVDCWWG 293
Query: 552 LVESEKPQNFNWSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 +VE PQ +NW+GY+ LF +V++ LK+QV+MSFH+CGGNVGDDV IPLP Sbjct: 294 IVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLP 344
>tr|Q9ZV58|Q9ZV58_ARATH Beta-amylase OS=Arabidopsis thaliana GN=At2g32290 PE=3 SV=1 Length = 505
Score = 141 bits (355), Expect = 5e-32 Identities = 58/100 (58%), Positives = 80/100 (80%) Frame = +3
Query: 405 TKYIPIYVMLPLGVITEQNTVDNPDKVLQDFKTLKSAKVDGVMVDCWWGLVESEKPQNFN 584 T Y+P+YVML LGVIT N ++N + + + K LK ++VDGVMVD WWG+VES+ P+ + Sbjct: 3 TNYVPVYVMLQLGVITNDNVLENEESLKKQLKKLKQSQVDGVMVDVWWGIVESKGPKQYQ 62
Query: 585 WSGYKHLFSLVKEAGLKLQVVMSFHQCGGNVGDDVNIPLP 704 WS Y++LF++V+ GLKLQ +MSFH+CGGN+GDDVNIP+P Sbjct: 63 WSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIP 102
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