BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960470|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_I05, 5'
         (621 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6G1E5|HRCA_BARQU Heat-inducible transcription repressor hrcA...    32   3.4  
sp|Q6G564|HRCA_BARHE Heat-inducible transcription repressor hrcA...    31   4.5  
sp|P79703|JUNB_CYPCA Transcription factor jun-B OS=Cyprinus carp...    31   5.9  
sp|Q5ALP1|EDC1_CANAL Enhancer of mRNA-decapping protein 1 OS=Can...    31   5.9  
sp|Q9LK31|Y3272_ARATH Kelch repeat-containing protein At3g27220 ...    30   7.7  
sp|Q9NX09|DDT4_HUMAN DNA-damage-inducible transcript 4 protein O...    30   7.7  

>sp|Q6G1E5|HRCA_BARQU Heat-inducible transcription repressor hrcA
           OS=Bartonella quintana GN=hrcA PE=3 SV=1
          Length = 356

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
 Frame = +1

Query: 31  VSDADNHGPNLCD----SMEFLCHHSDSVGMSVEGGLPAENNGMMLNRGQSSMPTEEK-- 192
           +S+A      LC     +++ L HH    G+++ GG  A++   ++ RG+S++  + K  
Sbjct: 202 LSEAKEEIARLCSETRAALDHLSHHLVETGLALWGGEDADHKIHLIVRGRSNLLEDVKAE 261

Query: 193 EDYQNVDTNMRCCFEEMPGRHSLDQVKSSKD 285
           ED +     +R  F+++  R S+ Q+    D
Sbjct: 262 EDLE----RLRHLFDDLETRESMAQLLDLTD 288


>sp|Q6G564|HRCA_BARHE Heat-inducible transcription repressor hrcA
           OS=Bartonella henselae GN=hrcA PE=3 SV=1
          Length = 356

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
 Frame = +1

Query: 31  VSDADNHGPNLCD----SMEFLCHHSDSVGMSVEGGLPAENNGMMLNRGQSSMPTEEK-- 192
           +S+A      LC     +++ L HH    G+++ GG  A++   ++ RG+S++  + K  
Sbjct: 202 LSEAKEEIARLCSETRAALDHLSHHLVETGLALWGGEGADHKIRLIVRGRSNLLEDVKAE 261

Query: 193 EDYQNVDTNMRCCFEEMPGRHSLDQVKSSKD 285
           ED +     +R  F+++  R S+ Q+    D
Sbjct: 262 EDLK----RLRHLFDDLETRESMAQLLDLTD 288


>sp|P79703|JUNB_CYPCA Transcription factor jun-B OS=Cyprinus carpio
           GN=junb PE=2 SV=1
          Length = 308

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 19/74 (25%), Positives = 29/74 (39%)
 Frame = -3

Query: 271 SLDPNCDAPAFLQSNISYLYPHSDSLPSPPWA*SFDLCSTSCHYSLQVNPLPQTCPQNRN 92
           +L+  C AP+   + ISYL PH      P     F          + +   PQT P   +
Sbjct: 153 TLNAYCPAPSHPSTTISYLPPHVQQSQHPENTHGFQHSGVLPQRYVPLKEEPQTVPDMHS 212

Query: 91  DGTRTPYCHIDLDH 50
                P   ID+++
Sbjct: 213 SDCSPPTSPIDMEN 226


>sp|Q5ALP1|EDC1_CANAL Enhancer of mRNA-decapping protein 1
           OS=Candida albicans GN=EDC1 PE=3 SV=1
          Length = 264

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 23/70 (32%), Positives = 31/70 (44%)
 Frame = -3

Query: 211 PHSDSLPSPPWA*SFDLCSTSCHYSLQVNPLPQTCPQNRNDGTRTPYCHIDLDHDYQHQK 32
           P+  + PSPP        ST    S   +P P+T   N+N   R    H D D+D  H +
Sbjct: 102 PYKSTSPSPPPP---PPPSTQPSTSTSTSPTPRTSNGNKNHHNRHQSNHSDYDND--HPQ 156

Query: 31  PPL*KGGKPS 2
             L  G KP+
Sbjct: 157 LSLPNGKKPN 166


>sp|Q9LK31|Y3272_ARATH Kelch repeat-containing protein At3g27220
           OS=Arabidopsis thaliana GN=At3g27220 PE=1 SV=1
          Length = 426

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 310 VVTQPRYQYLWSSSLDPNCDAP---AFLQSNISYLYPHSDSLPSPPWA 176
           +VT  RY Y+ S  L P C  P   +F+  + +  +    SLP+P +A
Sbjct: 167 IVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFPSLPAPRYA 214


>sp|Q9NX09|DDT4_HUMAN DNA-damage-inducible transcript 4 protein
           OS=Homo sapiens GN=DDIT4 PE=1 SV=1
          Length = 232

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = -2

Query: 581 LALRDSLLLPEPERDDPHL-RRLFRA*EFSFHLHSPLARARESCL--CRLLQPLTLGASI 411
           ++L D  LL +PE  D HL   L +       L   LA+AR       RLL P  L + +
Sbjct: 76  VSLPDFELLSDPE--DEHLCANLMQL------LQESLAQARLGSRRPARLLMPSQLVSQV 127

Query: 410 DMLAVSLAFSAPCGLTNAACSV 345
               + LA+S PCGL  A   V
Sbjct: 128 GKELLRLAYSEPCGLRGALLDV 149

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960470|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_I05, 5'
         (621 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TN11|A9TN11_PHYPA Predicted protein (Fragment) OS=Physcomit...    48   4e-04
tr|Q1ILL3|Q1ILL3_ACIBL Sensor protein OS=Acidobacteria bacterium...    35   2.8  
tr|Q11T19|Q11T19_CYTH3 B-glycosyltransferase-related protein, gl...    35   3.6  
tr|A0QZC4|A0QZC4_MYCS2 N-methylhydantoinase OS=Mycobacterium sme...    34   6.2  
tr|Q08DT0|Q08DT0_BOVIN DEAD (Asp-Glu-Ala-Asp) box polypeptide 10...    34   8.0  
tr|Q6FX46|Q6FX46_CANGA Similar to uniprot|Q12072 Saccharomyces c...    34   8.0  

>tr|A9TN11|A9TN11_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_170955 PE=4 SV=1
          Length = 342

 Score = 48.1 bits (113), Expect = 4e-04
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +1

Query: 427 VSGWSKRHKQLSRALARGLWRWKE 498
           V GWSKR KQLS ALARGLWRWK+
Sbjct: 164 VHGWSKRRKQLSHALARGLWRWKD 187


>tr|Q1ILL3|Q1ILL3_ACIBL Sensor protein OS=Acidobacteria bacterium
           (strain Ellin345) GN=Acid345_3236 PE=3 SV=1
          Length = 725

 Score = 35.4 bits (80), Expect = 2.8
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = -1

Query: 291 INIFGALHLIQTVTPRHFF-----KATSHICIHILIVFLLLRGHRALTSVQHHAII 139
           I + G L+ +   +PR+ +     K   ++C+  L++F LL+ H   T++ H AI+
Sbjct: 13  IFVTGMLNSVLVTSPRYQYLFELGKGALYVCLSALLIFFLLKRHEKQTAILHEAIL 68


>tr|Q11T19|Q11T19_CYTH3 B-glycosyltransferase-related protein,
           glycosyltransferase family 2 protein OS=Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ycdQ
           PE=4 SV=1
          Length = 379

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +1

Query: 241 MPGRHSLDQVKSSKDIDIVAGLPPTL-GIYRVTGYLTEQAALVKPHGALNARDTANMSML 417
           +P R+ +D+++S     ++   P  L  +Y V    T+    V  + A+   D   M  +
Sbjct: 45  LPVRNEIDKIESVLHDLLIQEYPQELFTVYLVDDASTDGTTQVLQNWAMRYPDRFRMVCI 104

Query: 418 APSVSGWSKRHKQLSRALAR 477
            P+ +GW  + KQ++ ALA+
Sbjct: 105 QPAYAGWKGKKKQIASALAQ 124


>tr|A0QZC4|A0QZC4_MYCS2 N-methylhydantoinase OS=Mycobacterium
           smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3973
           PE=4 SV=1
          Length = 656

 Score = 34.3 bits (77), Expect = 6.2
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +1

Query: 73  MEFLCHHSDSVGMSVEGGLPAENNGMMLNRG 165
           M + C  S SV   +EGGLP+  +G+ LNRG
Sbjct: 472 MSYCCDRSRSVTWGIEGGLPSIPHGVWLNRG 502


>tr|Q08DT0|Q08DT0_BOVIN DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
           OS=Bos taurus GN=DDX10 PE=2 SV=1
          Length = 876

 Score = 33.9 bits (76), Expect = 8.0
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
 Frame = +1

Query: 16  PFKEAVSDADN-----HGPNLCDSM--EFLCHHSDSVGMSVEGGLPAENNGMMLNRGQSS 174
           P KE V   DN       P+L +    EF  + ++ + +  +GG   E  G   + G S 
Sbjct: 521 PSKELVVSEDNKVTEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRPEGTGYRPDSGISD 580

Query: 175 MPTEEKEDYQNVDTNMR 225
              EEKED + +D  +R
Sbjct: 581 KEEEEKEDEEEMDEKLR 597


>tr|Q6FX46|Q6FX46_CANGA Similar to uniprot|Q12072 Saccharomyces
           cerevisiae YLR095c OS=Candida glabrata GN=CAGL0C00385g
           PE=4 SV=1
          Length = 853

 Score = 33.9 bits (76), Expect = 8.0
 Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
 Frame = +1

Query: 55  PNLCDSMEFLCHHSDSVGMSVEGGLPAENNGMMLNRGQSSMPTE------------EKED 198
           PNL +    LC  ++ +    + GLP +N  + +       P E            E ED
Sbjct: 478 PNLTELPSNLCITNEDIEERKKEGLPTDNEQLDIQDWLFDCPGETEPVTTLVSHEKEPED 537

Query: 199 YQNVDTNMRCCFEEMPGRHSLDQVKSSKDIDIVAGLPPTLGIYRVTGYLTEQAALVKPHG 378
            + V+ ++ CC E    +H   Q     +I   A L P++    +   LTE     K   
Sbjct: 538 PRIVNHSLVCCAECFRWQHWAHQPSKITEILTYASLKPSMLNDNIDHQLTE-----KDLA 592

Query: 379 ALNARDTANMSMLAPS 426
           A++   TA +  + PS
Sbjct: 593 AVSYASTAPLPSILPS 608