DK960473 |
Clone id |
TST39A01NGRL0007_I08 |
Library |
TST39 |
Length |
632 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_I08. 5' end sequence. |
Accession |
DK960473 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1834Contig1 |
Sequence |
GTGTAAGGAGAAGAGGCAATGAGCAGCTGCTTTTTTGTGTGTTTTGCTGCCAAAGAGAGG CCTCTATTTTAGTGAGGAGCGCATGTGTGTATCTGTGTATGTGTGTTGAAGAAAACATTA GCTGCAAAGAAGAGAAAGCTGTGAACAAAAGCTTATAATCAGAGAGCATCCCACCCCAAA CGCACATGGAAACCTTCCCTACACATCCCTTCAGAATGCCTCCTCTCTCCTTGCTCGCCA CTTTCCTCCTTTTGATCAGCTTGTCTACCATCCAAGCATGGGACTGCGAGAGCTCCTGCG GTGGCATCACATTGAACCCCCCTTTCGGCTCTGCTTCCGGCTGCGGCAGCTCCGCTTTCC AACCTTATGTCAACTGCAGCAATGGAAAGCTCCTCTTCTACTCCCCCACAGGCACCTACG AGGTGCAATCCATCGATTACAGCAACAATGTGATGGTGGTGATCGATCCACAGATGTCCA CTTGCAGCTCTATGCAGTTGAGCGGTGCGTTCGGGCTGCCGATCGGCGCCCCCTTCTCCT TCTCCAGCTACAACAAGGTGGTCTTGATAGGGTGCTCATCGACCTCATCACTCTACAGCA AGCAAAGCTGCGATACATCGTCGGAAGCGCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LMN8 |
Definition |
sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana |
Align length |
119 |
Score (bit) |
47.0 |
E-value |
8.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P2F4 |
Definition |
tr|A7P2F4|A7P2F4_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
115 |
Score (bit) |
99.0 |
E-value |
2.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960473|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_I08, 5' (632 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P2F4|A7P2F4_VITVI Chromosome chr1 scaffold_5, whole genome ... 99 2e-19 tr|B8LQW8|B8LQW8_PICSI Putative uncharacterized protein OS=Picea... 99 3e-19 tr|A7Q2N2|A7Q2N2_VITVI Chromosome chr1 scaffold_46, whole genome... 93 1e-17 tr|A5AJ67|A5AJ67_VITVI Putative uncharacterized protein OS=Vitis... 81 6e-14 tr|Q9LUT6|Q9LUT6_ARATH Gb|AAD32889.1 OS=Arabidopsis thaliana GN=... 69 3e-10 tr|A7R4P0|A7R4P0_VITVI Chromosome undetermined scaffold_748, who... 66 2e-09 tr|A7PCX6|A7PCX6_VITVI Chromosome chr17 scaffold_12, whole genom... 66 2e-09 tr|A9PCR1|A9PCR1_POPTR Putative uncharacterized protein OS=Popul... 66 2e-09 tr|Q9SY81|Q9SY81_ARATH F14N23.27 OS=Arabidopsis thaliana PE=4 SV=1 65 3e-09 tr|Q93ZB0|Q93ZB0_ARATH At1g10380/F14N23_32 (Putative uncharacter... 65 3e-09 tr|A9P966|A9P966_POPTR Putative uncharacterized protein OS=Popul... 65 3e-09 tr|A7NVX4|A7NVX4_VITVI Chromosome chr5 scaffold_2, whole genome ... 64 1e-08 tr|Q6I571|Q6I571_ORYSJ Os05g0409100 protein OS=Oryza sativa subs... 62 3e-08 tr|B6TNI8|B6TNI8_MAIZE Putative uncharacterized protein OS=Zea m... 62 3e-08 tr|A3B3Z1|A3B3Z1_ORYSJ Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|A2Y4L6|A2Y4L6_ORYSI Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|Q9FGR6|Q9FGR6_ARATH Genomic DNA, chromosome 5, TAC clone:K6A1... 60 1e-07 tr|Q5XV04|Q5XV04_ARATH Putative uncharacterized protein OS=Arabi... 60 1e-07 tr|Q5S4S0|Q5S4S0_ARATH Putative uncharacterized protein OS=Arabi... 60 1e-07 tr|B8LMZ8|B8LMZ8_PICSI Putative uncharacterized protein OS=Picea... 59 3e-07 tr|A7QUJ5|A7QUJ5_VITVI Chromosome chr10 scaffold_179, whole geno... 56 2e-06 tr|B6TY86|B6TY86_MAIZE Putative uncharacterized protein OS=Zea m... 54 8e-06 tr|O65389|O65389_ARATH F12F1.23 protein (Putative uncharacterize... 54 1e-05 tr|B7ZYE5|B7ZYE5_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05 tr|Q69KT1|Q69KT1_ORYSJ Os06g0364500 protein OS=Oryza sativa subs... 52 2e-05 tr|A9P8X3|A9P8X3_POPTR Putative uncharacterized protein OS=Popul... 49 3e-04 tr|A9PIH2|A9PIH2_POPTR Putative uncharacterized protein OS=Popul... 46 0.002 tr|A7PRW4|A7PRW4_VITVI Chromosome chr14 scaffold_27, whole genom... 44 0.008 tr|A7QGC3|A7QGC3_VITVI Chromosome undetermined scaffold_91, whol... 40 0.089 tr|A5PDR2|A5PDR2_9SPHN Putative Glutathione-dependent formaldehy... 39 0.20
>tr|A7P2F4|A7P2F4_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030036001 PE=4 SV=1 Length = 329
Score = 99.0 bits (245), Expect = 2e-19 Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 2/115 (1%) Frame = +3
Query: 285 CESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGKLLFYSPTGTYEVQSIDYSNNVMVVI 464 C CG IT+ PF F YV CS+G L F + TG Y V SIDYS++ ++V Sbjct: 36 CSDVCGNITVKFPFGTGFGCGHPDFARYVKCSSGTLQFSTLTGIYTVASIDYSSSTIIVN 95
Query: 465 DPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSSTSSLY--SKQSCDTSS 623 DP MSTC+SMQ SG+F L +PF+ + + VL+GCS+TS ++ ++ CDT S Sbjct: 96 DPLMSTCTSMQNSGSFSLDRASPFTIMADDVFVLLGCSTTSPVFDLNEDLCDTGS 150
>tr|B8LQW8|B8LQW8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 323
Score = 98.6 bits (244), Expect = 3e-19 Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Frame = +3
Query: 279 WDCESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGKLLFYSPTGTYEVQSIDYSNNVMV 458 W C +CG + + PF FQ V+C N KL+F + +G+Y + SIDYS + Sbjct: 52 WACRDTCGNLQVKYPFGTGPGCGDPRFQNSVSCVNQKLMFTTHSGSYPISSIDYSQTTIY 111
Query: 459 VIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSSTSSLYSKQS--CDTSS 623 + DPQMSTC++M SG+FGL APF F + + VL+ CS +S LYS + CDT S Sbjct: 112 LADPQMSTCAAMTSSGSFGLDAAAPFKFKN-DIFVLLNCSLSSCLYSPTNYLCDTGS 167
>tr|A7Q2N2|A7Q2N2_VITVI Chromosome chr1 scaffold_46, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028952001 PE=4 SV=1 Length = 372
Score = 93.2 bits (230), Expect = 1e-17 Identities = 47/102 (46%), Positives = 57/102 (55%) Frame = +3
Query: 285 CESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGKLLFYSPTGTYEVQSIDYSNNVMVVI 464 C+ +CG L PF FQPYV CS KL F + TG Y + +IDY++ V+ + Sbjct: 102 CQRTCGNQHLKYPFGSGPGCGDPRFQPYVTCSQEKLTFITHTGYYTITNIDYNSQVLCIT 161
Query: 465 DPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSSTSS 590 DP MSTCS Q S FGL APFSF N L+ CS TSS Sbjct: 162 DPSMSTCSCAQPSKGFGLDWNAPFSFHDGNVFALLDCSITSS 203
>tr|A5AJ67|A5AJ67_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023074 PE=4 SV=1 Length = 340
Score = 80.9 bits (198), Expect = 6e-14 Identities = 40/78 (51%), Positives = 48/78 (61%) Frame = +3
Query: 357 FQPYVNCSNGKLLFYSPTGTYEVQSIDYSNNVMVVIDPQMSTCSSMQLSGAFGLPIGAPF 536 FQPYV CS KL + TG Y + +IDY++ V+ + DP MSTCS Q S FGL APF Sbjct: 105 FQPYVXCSQEKLTXITHTGXYTITNIDYNSQVLYITDPSMSTCSCAQPSKGFGLDWNAPF 164
Query: 537 SFSSYNKVVLIGCSSTSS 590 SF N L+ CS TSS Sbjct: 165 SFHDGNVFALLDCSITSS 182
>tr|Q9LUT6|Q9LUT6_ARATH Gb|AAD32889.1 OS=Arabidopsis thaliana GN=At3g17350 PE=4 SV=1 Length = 278
Score = 68.6 bits (166), Expect = 3e-10 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 2/111 (1%) Frame = +3
Query: 276 AWDCESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGKLLFYSPTGTYEVQSIDYSNNVM 455 A C + CG I +N PF ++ NCS L F +P+G+Y+VQSIDY M Sbjct: 28 ATSCRTLCGNIPINYPFGIDGGCGSPQYRGMFNCSTD-LYFTTPSGSYKVQSIDYEKKTM 86
Query: 456 VVIDPQMSTCSSMQLSGAFGL-PIGAPFSFSSYNKV-VLIGCSSTSSLYSK 602 V+ DP MSTCS +Q F + I SY+ V L CS+ S ++++ Sbjct: 87 VIFDPAMSTCSILQPHHDFKMADIQNTLIRPSYDTVFALFNCSNDSPVHNR 137
>tr|A7R4P0|A7R4P0_VITVI Chromosome undetermined scaffold_748, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00004605001 PE=4 SV=1 Length = 284
Score = 66.2 bits (160), Expect = 2e-09 Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Frame = +3
Query: 285 CESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNG-----KLLFYSPTGTYEVQSIDYSNN 449 C +CG +++ PF FQPY++CS +LL + TG Y + SI Y Sbjct: 29 CRDTCGSLSVKFPFGTGVGCGSPRFQPYISCSQSSDGGDQLLLRTHTGVYPITSISYEAA 88
Query: 450 VMVVIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSSTSSLYSKQSCDTS 620 V P MS C+SMQ S GL +PF ++L S +S S CD S Sbjct: 89 AFTVTPPLMSNCTSMQPSPNLGLDWASPFQLGPSAFILLSCPPSLTSKASPPICDPS 145
>tr|A7PCX6|A7PCX6_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016052001 PE=4 SV=1 Length = 324
Score = 66.2 bits (160), Expect = 2e-09 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 5/109 (4%) Frame = +3
Query: 285 CESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGKLLFYSPTGTYEVQSIDYSNNVMVVI 464 C S CG IT++ PF F+ + C N L+F+ +G+Y V IDY+ + + Sbjct: 34 CRSYCGNITIDYPFALRSGCGHPGFRDLLFCMNDVLMFHITSGSYRVLDIDYAYQALTLD 93
Query: 465 DPQMSTCSSMQLSG-AFGLPI---GAPF-SFSSYNKVVLIGCSSTSSLY 596 DP MSTC S+ L G G I AP+ + ++ N +L+GCS+ S L+ Sbjct: 94 DPHMSTCESIVLGGKGNGFAIEHWRAPYLNPAADNVFMLLGCSAQSPLF 142
>tr|A9PCR1|A9PCR1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 280
Score = 65.9 bits (159), Expect = 2e-09 Identities = 31/71 (43%), Positives = 40/71 (56%) Frame = +3
Query: 285 CESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGKLLFYSPTGTYEVQSIDYSNNVMVVI 464 C +SCG I +N PF F+ +NCS L F +P+G Y+VQ IDY M + Sbjct: 31 CRTSCGSIAINYPFGIDDGCGAPQFRSMLNCSTD-LFFLTPSGGYKVQHIDYDKKTMTIY 89
Query: 465 DPQMSTCSSMQ 497 DP MSTCS +Q Sbjct: 90 DPAMSTCSILQ 100
>tr|Q9SY81|Q9SY81_ARATH F14N23.27 OS=Arabidopsis thaliana PE=4 SV=1 Length = 333
Score = 65.5 bits (158), Expect = 3e-09 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Frame = +3
Query: 285 CESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGK--LLFYSPTGTYEVQSIDYSNNVMV 458 C+ +CG I + P F Y+ C + L + TG+Y + S+DY+ + Sbjct: 29 CQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQEIY 88
Query: 459 VIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSSTSS 590 V DP MSTC+ + S FGL APFSF L+ CS S Sbjct: 89 VTDPSMSTCACTRPSHGFGLDWDAPFSFHDDTVFTLLDCSVDES 132
>tr|Q93ZB0|Q93ZB0_ARATH At1g10380/F14N23_32 (Putative uncharacterized protein At1g10380) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g10380 PE=2 SV=1 Length = 305
Score = 65.5 bits (158), Expect = 3e-09 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Frame = +3
Query: 285 CESSCGGITLNPPFXXXXXXXXXXFQPYVNCSNGK--LLFYSPTGTYEVQSIDYSNNVMV 458 C+ +CG I + P F Y+ C + L + TG+Y + S+DY+ + Sbjct: 29 CQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQEIY 88
Query: 459 VIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSSTSS 590 V DP MSTC+ + S FGL APFSF L+ CS S Sbjct: 89 VTDPSMSTCACTRPSHGFGLDWDAPFSFHDDTVFTLLDCSVDES 132
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