DK960479
Clone id TST39A01NGRL0007_I14
Library
Length 267
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_I14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CTTATATATATAAGTTTTTGTGTGTACCGTTCGAATCCCTGTGTTCTCCTACACTTCTAT
ACCCTTCTCCATCCCCCTCAACTCCTGAGCGTCCGTGACTCGCTCCGCTTCTGTGGCGAC
TCCGCGAATGGTATCAGAGCATTAGCTTTGTCTTGGGTAACAAGCTCCCGGAAGGAAGAG
TTTGAGCAGACGGGAAAAAAAGGGCGAGGCTCTCACAGAGTTGGAAGAACAACCTTGTTG
ATCTCACTCTCTGCCGGGGTTGTCTTA
■■Homology search results ■■ -
sp_hit_id O95235
Definition sp|O95235|KI20A_HUMAN Kinesin-like protein KIF20A OS=Homo sapiens
Align length 60
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960479|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_I14, 5'
(267 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O95235|KI20A_HUMAN Kinesin-like protein KIF20A OS=Homo sapien... 31 2.2
sp|Q29RT6|KI20A_BOVIN Kinesin-like protein KIF20A OS=Bos taurus ... 31 2.2
sp|Q25998|PRI1_PLAFK DNA primase small subunit OS=Plasmodium fal... 29 8.4
sp|Q7KQM1|PRI1_PLAF7 DNA primase small subunit OS=Plasmodium fal... 29 8.4
sp|Q9WTR8|PHLPP_RAT PH domain leucine-rich repeat protein phosph... 29 8.4
sp|Q8CHE4|PHLPP_MOUSE PH domain leucine-rich repeat-containing p... 29 8.4
sp|P97329|KI20A_MOUSE Kinesin-like protein KIF20A OS=Mus musculu... 29 8.4

>sp|O95235|KI20A_HUMAN Kinesin-like protein KIF20A OS=Homo sapiens
GN=KIF20A PE=1 SV=1
Length = 890

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +1

Query: 58 YTLLHPPQLLSVRDSLRFCGDSANGIRALALSWVTSSRKEEFEQTGKKGRGSHRVGRTTL 237
Y LL PP R +LR C D L+W+ EE + K GR + T L
Sbjct: 314 YDLLEPPSQQRKRQTLRLCEDQNGNPYVKDLNWIHVQDAEEAWKLLKVGRKNQSFASTHL 373


>sp|Q29RT6|KI20A_BOVIN Kinesin-like protein KIF20A OS=Bos taurus
GN=KIF20A PE=2 SV=1
Length = 888

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +1

Query: 58 YTLLHPPQLLSVRDSLRFCGDSANGIRALALSWVTSSRKEEFEQTGKKGRGSHRVGRTTL 237
Y LL PP R +LR C D L+W+ EE + K GR + T L
Sbjct: 313 YDLLEPPSQQRKRQTLRLCEDQNGNPYVKDLNWIHVQDAEEAWKLLKVGRKNQSFASTHL 372


>sp|Q25998|PRI1_PLAFK DNA primase small subunit OS=Plasmodium
falciparum (isolate K1 / Thailand) PE=3 SV=1
Length = 452

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1

Query: 58 YTLLHPPQLLSVRDSLRFCGDSANGIRALALSWVTSSRKEEFE 186
YT L+ P S R+ C S G + + W++ S EEF+
Sbjct: 46 YTKLNDPHFFSKREFSFTCKKSDQGKEEIYIRWLSFSNPEEFK 88


>sp|Q7KQM1|PRI1_PLAF7 DNA primase small subunit OS=Plasmodium
falciparum (isolate 3D7) GN=PF14_0366 PE=3 SV=1
Length = 452

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1

Query: 58 YTLLHPPQLLSVRDSLRFCGDSANGIRALALSWVTSSRKEEFE 186
YT L+ P S R+ C S G + + W++ S EEF+
Sbjct: 46 YTKLNDPHFFSKREFSFTCKKSDQGKEEIYIRWLSFSNPEEFK 88


>sp|Q9WTR8|PHLPP_RAT PH domain leucine-rich repeat protein phosphatase
OS=Rattus norvegicus GN=Phlpp PE=1 SV=1
Length = 1696

Score = 28.9 bits (63), Expect = 8.4
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1

Query: 73 PPQLLSVRDSLRFCGDSANGIRAL---ALSWVTSSRKEEFEQT 192
PP LL DSLRF SAN + L LS TSS +E T
Sbjct: 941 PPNLLMKADSLRFLNASANKLETLPPATLSEETSSILQELYLT 983


>sp|Q8CHE4|PHLPP_MOUSE PH domain leucine-rich repeat-containing
protein phosphatase OS=Mus musculus GN=Phlpp PE=2 SV=2
Length = 1687

Score = 28.9 bits (63), Expect = 8.4
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1

Query: 73 PPQLLSVRDSLRFCGDSANGIRAL---ALSWVTSSRKEEFEQT 192
PP LL DSLRF SAN + L LS TSS +E T
Sbjct: 934 PPNLLMKADSLRFLNASANKLETLPPATLSEETSSILQELYLT 976


>sp|P97329|KI20A_MOUSE Kinesin-like protein KIF20A OS=Mus musculus
GN=Kif20a PE=2 SV=1
Length = 887

Score = 28.9 bits (63), Expect = 8.4
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +1

Query: 58 YTLLHPPQLLSVRDSLRFCGDSANGIRALALSWVTSSRKEEFEQTGKKGRGSHRVGRT 231
Y LL PP R +LR C D L+W+ EE + K GR + T
Sbjct: 313 YDLLEPPSHQHKRQTLRLCEDQNGNPYVKDLNWIHVRDVEEAWKLLKVGRKNQSFAST 370


tr_hit_id A1TT43
Definition tr|A1TT43|A1TT43_ACIAC Protein serine/threonine phosphatase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1)
Align length 56
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960479|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_I14, 5'
(267 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1TT43|A1TT43_ACIAC Protein serine/threonine phosphatase OS=A... 33 9.2

>tr|A1TT43|A1TT43_ACIAC Protein serine/threonine phosphatase
OS=Acidovorax avenae subsp. citrulli (strain AAC00-1)
GN=Aave_3580 PE=4 SV=1
Length = 304

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1

Query: 91 VRDSLRFCGDSANGIRALALSWVTSSRKEEFEQTGKKGRGSHRVGRTTLLISLSAG 258
V D+LR GDS++ + +A+ W T + FE T +G +H +G ++ AG
Sbjct: 217 VEDALRRAGDSSDNVTVVAMEWET---PDTFEST--QGISTHSIGDDGFASTIQAG 267