| DK960498 |
| Clone id |
TST39A01NGRL0007_J09 |
| Library |
TST39 |
| Length |
648 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_J09. 5' end sequence. |
| Accession |
DK960498 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL3461Contig1 |
| Sequence |
CCACGTCATCTCTCTCACAGAGACGGATCCTCTTCCGCCTGCTTCACAGGTTAGCATCCC
GAAACCTTCCTTTTCTTTCAAAGTGAAAGCTTTCCGCAGGAAATCTGGAGCTGAGCTTTC
TGCCAGGGCCTCTCTTGTCAGCAGAGCTCATTTACTCACACAGAGCAGCAGCAGTGAAAC
TCTCAGAGAATCGAATTCCTCTGAGGAAAAGAAATTCGATAAGGGCTTCAAAGGCTTGCG
ATCAAACGGTCGTCTTAGGCAGCAGTTGCATGGCGCCCAAGATTTACATGATAACCAGCA
ACAAGCTTTGCAAAGATTGAGAGGTTTCTCTGCTCTACGTAAGGATACACCTTCCAAAAA
AGTTGTCAGTTCGGTGCCGCAGAGGCGTCACCTGTATTTGGATCCACCTGCCCATCTTCA
GCAAGCCCCACGTACAGAAGATTTAGAATCTTTTAATATTGAGAAAGATCGCGCCAGTAC
CTCCAATGGTTTTGCAGGCCAAAATGCGCAACCTGCAAAGACAACAGGAAAAAATGCTCA
ATCCATAAAGCGTCGGAGTGGTAGGAACTCATCAAGAGGGTTTGATGTTTTGGATGACCT
AATGTCGGCTCAGGGTCGCAACTCANAGGCATTGTTGGGAGAGTTTGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q90WJ3 |
| Definition |
sp|Q90WJ3|PAXI1_XENLA PAX-interacting protein 1 OS=Xenopus laevis |
| Align length |
71 |
| Score (bit) |
32.3 |
| E-value |
2.2 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B2ATW7 |
| Definition |
tr|B2ATW7|B2ATW7_PODAN Predicted CDS Pa_1_17200 OS=Podospora anserina |
| Align length |
140 |
| Score (bit) |
40.0 |
| E-value |
0.12 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960498|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_J09, 5'
(648 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B2ATW7|B2ATW7_PODAN Predicted CDS Pa_1_17200 OS=Podospora ans... 40 0.12
tr|A6D7B8|A6D7B8_9VIBR DNA-binding transcriptional activator OS=... 35 3.0
tr|A3LTF0|A3LTF0_PICST Component of SWI/SNF global transcription... 35 3.0
tr|Q99MV3|Q99MV3_MOUSE Testis protein TEX15 OS=Mus musculus GN=T... 35 5.1
tr|Q3UPQ6|Q3UPQ6_MOUSE Putative uncharacterized protein (Fragmen... 35 5.1
tr|O97005|O97005_LEIMA Putative uncharacterized protein L7610.03... 34 6.7
tr|A6G8W7|A6G8W7_9DELT Putative uncharacterized protein OS=Plesi... 34 8.7
tr|B3FIY5|B3FIY5_9CAUD Putative uncharacterized protein OS=Pseud... 34 8.7
tr|Q24FC7|Q24FC7_TETTH Dual specificity phosphatase, catalytic d... 34 8.7
tr|B4GGH0|B4GGH0_DROPE GL17138 OS=Drosophila persimilis GN=GL171... 34 8.7
tr|Q5SNG7|Q5SNG7_ORYSJ cDNA clone:J023020E22, full insert sequen... 34 8.8
>tr|B2ATW7|B2ATW7_PODAN Predicted CDS Pa_1_17200 OS=Podospora
anserina PE=4 SV=1
Length = 1283
Score = 40.0 bits (92), Expect = 0.12
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 24/140 (17%)
Frame = +2
Query: 278 QDLHDNQQQALQRL----RGFSALRKDTPSKKVVSSVPQRRHLYLDPPA-HLQQAPRTED 442
QD H QQ A QR R A+ D + ++S P+ +Y PP + QQAP
Sbjct: 155 QDYHSPQQTATQRFYQGGRPAPAMNADPYRSQSLASYPRGPPMYQPPPQQYQQQAPSANA 214
Query: 443 LESFNIE-------------------KDRASTSNGFAGQNAQPAKTTGKNAQSIKRRSGR 565
L + +DR++T G+ + +T +R +GR
Sbjct: 215 LRNAQYSNQHSARTTAQGRVVPERHFEDRSNTMTGYPSHDRDSHQTMSGRVIPNRRPAGR 274
Query: 566 NSSRGFDVLDDLMSAQGRNS 625
+SS G V D ++ +S
Sbjct: 275 DSSGGHSVTADYLANSSHSS 294
>tr|A6D7B8|A6D7B8_9VIBR DNA-binding transcriptional activator
OS=Vibrio shilonii AK1 GN=VSAK1_04510 PE=4 SV=1
Length = 482
Score = 35.4 bits (80), Expect = 3.0
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 QQALQRLRGFSALRKDTPSKKVVSSVPQRRHLY-LDPPAHLQQAPRTEDLESFNIEKDRA 475
+Q + LRG L+ T + + ++P++ +L+ L+ AH+++AP+ +E +IE+ +
Sbjct: 73 RQVISSLRG--QLKDKTRPYRTIKTIPKKGYLFDLEVIAHIEKAPQVVAVEVDDIEEPQF 130
Query: 476 STSNGFAGQN 505
S +G G N
Sbjct: 131 SEKSGHKGGN 140
>tr|A3LTF0|A3LTF0_PICST Component of SWI/SNF global transcription
activator complex OS=Pichia stipitis GN=SNF2 PE=4 SV=2
Length = 1566
Score = 35.4 bits (80), Expect = 3.0
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Frame = +2
Query: 209 KKFDKGFKGLRSNGRLRQQLHGAQDLHDNQQQALQRLRGFS---------ALRKDTPS-- 355
K F++ + L+ N LRQQ Q QQQ Q+ + AL + S
Sbjct: 42 KYFNQQQQMLQQNPNLRQQQQQQQQQQQQQQQQQQQQQQQQLQNQNQQNPALNPQSSSQL 101
Query: 356 --KKVVSSVPQRRHLYLDP---PAHLQQA-PRTEDLESFNIEKDR-----ASTSNGFAGQ 502
+++ S+PQ++H + P P+H QQ P+++ L + + T +G G
Sbjct: 102 NNQQIPQSLPQQQHQGIHPQGTPSHQQQQFPQSQSLNQMQFNNNNNTSNVSGTGSGSQGS 161
Query: 503 NAQPAKTTGKNAQSIKRRSGRNSSRGFDVLDDLMSAQGRNS 625
+++ A TT + Q +K + F L L++ G N+
Sbjct: 162 SSESAFTT-QQFQLVKSQ--------FQALKYLLNKPGANN 193
>tr|Q99MV3|Q99MV3_MOUSE Testis protein TEX15 OS=Mus musculus
GN=Tex15 PE=2 SV=1
Length = 2785
Score = 34.7 bits (78), Expect = 5.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 458 IEKDRASTSNGFAGQNAQPAKTTGKNAQSIKRRSGRNSSRGFDVL 592
+ + T N F G+N +PA+T ++++++R N RG + L
Sbjct: 646 LNSEECFTFNSFRGKNGKPAETASSESEAVEQRHAPNDQRGLEHL 690
>tr|Q3UPQ6|Q3UPQ6_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Tex15 PE=2 SV=1
Length = 1255
Score = 34.7 bits (78), Expect = 5.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 458 IEKDRASTSNGFAGQNAQPAKTTGKNAQSIKRRSGRNSSRGFDVL 592
+ + T N F G+N +PA+T ++++++R N RG + L
Sbjct: 896 LNSEECFTFNSFRGKNGKPAETASSESEAVEQRHAPNDQRGLEHL 940
>tr|O97005|O97005_LEIMA Putative uncharacterized protein L7610.03
OS=Leishmania major GN=L7610.03 PE=4 SV=1
Length = 1279
Score = 34.3 bits (77), Expect = 6.7
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 290 DNQQQALQRLRGFSALRKDTPSKKVV-SSVPQRRHLYLDPPAHLQ----QAPRTEDLESF 454
D + L R D PS+ ++PQ+RH PPAH +AP +D E
Sbjct: 855 DRPRVHLHNSRAAENALDDEPSRSAQRGALPQQRHTQTAPPAHRSGAALEAP-LDDYEDG 913
Query: 455 NIEKDRASTSNGFAGQNAQPAKT 523
N + S AG +AQP+ +
Sbjct: 914 NAPYQEEARSEVIAGSDAQPSSS 936
>tr|A6G8W7|A6G8W7_9DELT Putative uncharacterized protein
OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_13910 PE=4 SV=1
Length = 481
Score = 33.9 bits (76), Expect = 8.7
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 257 RQQLHGAQDLHDNQQQALQRLRGFSALRKDTPSKKVVSSVPQRRHLYLDPPAHLQQA 427
R+ + + + D+Q Q L F+ALR +TPS++ SV RR LY D A L+ A
Sbjct: 189 RRYIVAIRGVLDDQAQPLAASPAFAALRDETPSEE--PSVEARRGLYADIFARLEDA 243
>tr|B3FIY5|B3FIY5_9CAUD Putative uncharacterized protein
OS=Pseudomonas phage 201phi2-1 GN=201phi2-1p122 PE=4
SV=1
Length = 274
Score = 33.9 bits (76), Expect = 8.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 575 LMSSYHSDALWIEHFFLLSLQVAHFGLQNHWRYW 474
L++ Y SD LW EHF L L +H G W W
Sbjct: 164 LLTHYPSDLLWKEHFNRLLLLESHTGKLKPWNMW 197
>tr|Q24FC7|Q24FC7_TETTH Dual specificity phosphatase, catalytic domain
containing protein OS=Tetrahymena thermophila SB210
GN=TTHERM_00865360 PE=4 SV=1
Length = 1321
Score = 33.9 bits (76), Expect = 8.7
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 8/127 (6%)
Frame = +2
Query: 287 HDNQQQALQRLRGFSALRKDTPSKKV--------VSSVPQRRHLYLDPPAHLQQAPRTED 442
+ NQ +Q + + ++ S K+ V+ + Q + + H Q T
Sbjct: 1026 NQNQISLVQNQSSANNILREQDSNKMTNQNVQEQVNQINQISNNLMKTLLHFQPQSTTNQ 1085
Query: 443 LESFNIEKDRASTSNGFAGQNAQPAKTTGKNAQSIKRRSGRNSSRGFDVLDDLMSAQGRN 622
S NI S+GF Q+ P + TG Q+ ++S SS +L++ M + +
Sbjct: 1086 SNSNNISIKNTGNSSGFMKQSGGPVRVTGDILQNSFKQSNNTSSGQQLLLNNYMQEENNS 1145
Query: 623 SXALLGE 643
S L +
Sbjct: 1146 SVYKLNQ 1152
>tr|B4GGH0|B4GGH0_DROPE GL17138 OS=Drosophila persimilis GN=GL17138
PE=4 SV=1
Length = 1197
Score = 33.9 bits (76), Expect = 8.7
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 353 SKKVVSSVPQR-RHLYLDPPAHLQQA-PRTEDLESFNIEKDRASTSNGFAGQNAQPAKTT 526
S+KV+ ++P R HL+ AHL A P E+LE + DR NGF + +
Sbjct: 865 SRKVLEAIPARLSHLW----AHLSTALPLEEELEISHTVYDRL---NGFRKEGDLKKRLA 917
Query: 527 GKNAQSIKRRSGRNSSR 577
GKN Q +++R ++R
Sbjct: 918 GKNPQLVQQRQKEAAAR 934
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