DK960505 |
Clone id |
TST39A01NGRL0007_J16 |
Library |
TST39 |
Length |
595 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_J16. 5' end sequence. |
Accession |
DK960505 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTTGGTGGGTGAAGAAAAAAATGACCTGCTGGATTATTTGAGAAGTTTATCACCTGACAA GGTAGCAGAATTATCACAACCCACTTCCCCAGAAGTAGAAGAGGTGATTCAAGAAGTCAT AAATGGATTGTTGGACAGTCCTGCAACTAAGCTCCAGCAGAAGGGCACTCAACTTGATAA TGGGACGGTCAGTTCTTTGAGTTCTCCCTGGGAAGATGAGAGTATCAAAAAGCTAAGCTC ATCGCCCCTGCAATCTCAATCTGCAGTGATTGTGAGTCGGGATCATCTTGCAAGGCTGCT TTTCTGGTGTATGTTGTTGGGCCATCACATGAGAGGCTTGGAGTATCGCCTAGAGCTTAG TCGCACACTAAGCTTGTGTGGGGATCTTGAACCTGATGTTACGGAGAGATGAAAGATGGC AGATGACAGGCTTTGGAGCCGTAGCCTGTACACCCGGCTCTTATCCATTGTTGCAGAGAC AACAAGAACAGAGTGTGCTTTCTGTTTTTGTCCTCCAAATATGTGCATATGTCTATACGC ATCATCACTGAGTGCTGTAATTCTAGAAGTGTTGTAATCTTAGCTTAGTATATTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A6VP44 |
Definition |
sp|A6VP44|ACCD_ACTSZ Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) |
Align length |
47 |
Score (bit) |
32.7 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2XJE4 |
Definition |
tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
131 |
Score (bit) |
123.0 |
E-value |
9.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960505|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_J16, 5' (595 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza... 123 9e-27 tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protei... 122 2e-26 tr|Q0DQD5|Q0DQD5_ORYSJ Os03g0607500 protein (Fragment) OS=Oryza ... 122 2e-26 tr|O82329|O82329_ARATH Putative uncharacterized protein At2g1491... 122 2e-26 tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|A2XJE3|A2XJE3_ORYSI Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genom... 121 3e-26 tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea m... 120 5e-26 tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) O... 102 2e-20 tr|Q2QN28|Q2QN28_ORYSJ Os12g0581700 protein OS=Oryza sativa subs... 99 1e-19 tr|Q2QN27|Q2QN27_ORYSJ Seed maturation protein PM23, putative, e... 99 1e-19 tr|A2ZM33|A2ZM33_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|B8AM69|B8AM69_ORYSI Putative uncharacterized protein OS=Oryza... 94 8e-18 tr|Q9LFQ8|Q9LFQ8_ARATH Seed maturation-like protein (At4g33110) ... 91 4e-17 tr|Q8LGA2|Q8LGA2_ARATH Seed maturation-like protein OS=Arabidops... 91 4e-17 tr|Q3EC02|Q3EC02_ARATH Uncharacterized protein At2g14910.2 OS=Ar... 85 3e-15 tr|A9NWY6|A9NWY6_PICSI Putative uncharacterized protein OS=Picea... 85 4e-15 tr|A7PMK3|A7PMK3_VITVI Chromosome chr14 scaffold_21, whole genom... 84 6e-15 tr|Q8DJZ2|Q8DJZ2_THEEB Tll1078 protein OS=Thermosynechococcus el... 50 1e-04 tr|Q7VBN6|Q7VBN6_PROMA Uncharacterized protein OS=Prochlorococcu... 49 2e-04 tr|Q9KHE7|Q9KHE7_ANASP Alr3811 protein OS=Anabaena sp. (strain P... 49 2e-04 tr|Q3MBX3|Q3MBX3_ANAVT Putative uncharacterized protein OS=Anaba... 49 2e-04 tr|B7JX53|B7JX53_SYNP8 Putative uncharacterized protein OS=Synec... 47 6e-04 tr|B4BWT7|B4BWT7_9CHRO Putative uncharacterized protein OS=Cyano... 47 6e-04 tr|A5GT32|A5GT32_SYNR3 Putative uncharacterized protein SynRCC30... 47 0.001 tr|A9TD15|A9TD15_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|B2J978|B2J978_NOSP7 Putative uncharacterized protein OS=Nosto... 46 0.002 tr|Q10XF5|Q10XF5_TRIEI Putative uncharacterized protein OS=Trich... 45 0.002 tr|B4WFQ3|B4WFQ3_9SYNE Putative uncharacterized protein OS=Synec... 45 0.003 tr|A9RVG4|A9RVG4_PHYPA Predicted protein (Fragment) OS=Physcomit... 45 0.003
>tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12569 PE=4 SV=1 Length = 419
Score = 123 bits (308), Expect = 9e-27 Identities = 68/131 (51%), Positives = 89/131 (67%), Gaps = 2/131 (1%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKG-TQLDN 181 VGEEKNDLLDYLRSL+P+KVAELS+ TSP V+E I V++GLL + + K+ K L N Sbjct: 279 VGEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPLGN 338
Query: 182 GTVSSLSSPWEDEXXXXXXXXXXXXXXAVI-VSRDHLARLLFWCMLLGHHMRGLEYRLEL 358 + +L+ ED+ +I V RD+LARLLFWCMLLGH++RGLEYRLEL Sbjct: 339 ASGGALNLGGEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLEYRLEL 398
Query: 359 SRTLSLCGDLE 391 ++ L + D+E Sbjct: 399 AQLLRISTDVE 409
>tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protein PM23, putative, expressed) OS=Oryza sativa subsp. japonica GN=Os03g41080 PE=4 SV=1 Length = 405
Score = 122 bits (305), Expect = 2e-26 Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 2/131 (1%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKG-TQLDN 181 VGEEKNDLLDYLRSL+P+KVAELS+ TSP V+E I V++GLL + + K+ K L N Sbjct: 265 VGEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPLGN 324
Query: 182 GTVSSLSSPWEDEXXXXXXXXXXXXXXAVI-VSRDHLARLLFWCMLLGHHMRGLEYRLEL 358 + L+ ED+ +I V RD+LARLLFWCMLLGH++RGLEYRLEL Sbjct: 325 ASGGVLNLGGEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLEYRLEL 384
Query: 359 SRTLSLCGDLE 391 ++ L + D+E Sbjct: 385 AQLLRISTDVE 395
>tr|Q0DQD5|Q0DQD5_ORYSJ Os03g0607500 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0607500 PE=4 SV=1 Length = 183
Score = 122 bits (305), Expect = 2e-26 Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 2/131 (1%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKG-TQLDN 181 VGEEKNDLLDYLRSL+P+KVAELS+ TSP V+E I V++GLL + + K+ K L N Sbjct: 43 VGEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPLGN 102
Query: 182 GTVSSLSSPWEDEXXXXXXXXXXXXXXAVI-VSRDHLARLLFWCMLLGHHMRGLEYRLEL 358 + L+ ED+ +I V RD+LARLLFWCMLLGH++RGLEYRLEL Sbjct: 103 ASGGVLNLGGEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLEYRLEL 162
Query: 359 SRTLSLCGDLE 391 ++ L + D+E Sbjct: 163 AQLLRISTDVE 173
>tr|O82329|O82329_ARATH Putative uncharacterized protein At2g14910 OS=Arabidopsis thaliana GN=At2g14910 PE=2 SV=1 Length = 386
Score = 122 bits (305), Expect = 2e-26 Identities = 61/127 (48%), Positives = 84/127 (66%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKGTQLDNG 184 VGEEKNDLLDYLRSL P+KVAELS+P +PEV+E I V++GLL + + K+ K + Sbjct: 252 VGEEKNDLLDYLRSLQPEKVAELSEPAAPEVKETIHSVVHGLLATLSPKMHSKFPASEVP 311
Query: 185 TVSSLSSPWEDEXXXXXXXXXXXXXXAVIVSRDHLARLLFWCMLLGHHMRGLEYRLELSR 364 ++ + +++ + ++RD+LARLLFWCMLLGH++RGLEYR+EL Sbjct: 312 PTETVKAKSDEDCAELVENTSLQFQPLISLTRDYLARLLFWCMLLGHYLRGLEYRMELME 371
Query: 365 TLSLCGD 385 LSL D Sbjct: 372 VLSLTCD 378
>tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011228 PE=4 SV=1 Length = 405
Score = 122 bits (305), Expect = 2e-26 Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 2/131 (1%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKG-TQLDN 181 VGEEKNDLLDYLRSL+P+KVAELS+ TSP V+E I V++GLL + + K+ K L N Sbjct: 265 VGEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPLGN 324
Query: 182 GTVSSLSSPWEDEXXXXXXXXXXXXXXAVI-VSRDHLARLLFWCMLLGHHMRGLEYRLEL 358 + L+ ED+ +I V RD+LARLLFWCMLLGH++RGLEYRLEL Sbjct: 325 ASGGVLNLGGEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLEYRLEL 384
Query: 359 SRTLSLCGDLE 391 ++ L + D+E Sbjct: 385 AQLLRISTDVE 395
>tr|A2XJE3|A2XJE3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12568 PE=4 SV=1 Length = 239
Score = 122 bits (305), Expect = 2e-26 Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 2/131 (1%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKG-TQLDN 181 VGEEKNDLLDYLRSL+P+KVAELS+ TSP V+E I V++GLL + + K+ K L N Sbjct: 99 VGEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPLGN 158
Query: 182 GTVSSLSSPWEDEXXXXXXXXXXXXXXAVI-VSRDHLARLLFWCMLLGHHMRGLEYRLEL 358 + L+ ED+ +I V RD+LARLLFWCMLLGH++RGLEYRLEL Sbjct: 159 ASGGVLNLGGEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLEYRLEL 218
Query: 359 SRTLSLCGDLE 391 ++ L + D+E Sbjct: 219 AQLLRISTDVE 229
>tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007721001 PE=4 SV=1 Length = 388
Score = 121 bits (304), Expect = 3e-26 Identities = 63/133 (47%), Positives = 87/133 (65%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKGTQLDNG 184 VGEE+NDLLDYLRSL P+KVAELS+P +PE++E+I ++GLL + + K+ K +N Sbjct: 251 VGEEQNDLLDYLRSLQPEKVAELSEPATPELKEIIHSAVHGLLATLSPKMHSKAPLSENT 310
Query: 185 TVSSLSSPWEDEXXXXXXXXXXXXXXAVIVSRDHLARLLFWCMLLGHHMRGLEYRLELSR 364 + L+ ED + ++RD+LARLLFWCMLLGH++RGLEYR+EL Sbjct: 311 STGVLNVGNED-CTELVENTSVQFQPLISLTRDYLARLLFWCMLLGHYLRGLEYRVELIE 369
Query: 365 TLSLCGDLEPDVT 403 LSL D E + + Sbjct: 370 LLSLSSDAENEAS 382
>tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 392
Score = 120 bits (302), Expect = 5e-26 Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 2/126 (1%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKG-TQLDN 181 VGEEKNDLLDYLRSL+P+KVAELS+ TSP V+E I V++GLL + + K+ K LDN Sbjct: 253 VGEEKNDLLDYLRSLTPEKVAELSESTSPGVQETIHSVVHGLLATLSPKVHSKAPPPLDN 312
Query: 182 GTVSSLSSPWEDEXXXXXXXXXXXXXXAVI-VSRDHLARLLFWCMLLGHHMRGLEYRLEL 358 + L+ ED+ +I V RD+LARLLFWCMLLGH++RGLEYRLEL Sbjct: 313 ISGGVLNLGGEDDDRAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLEYRLEL 372
Query: 359 SRTLSL 376 +R L + Sbjct: 373 ARLLRI 378
>tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) OS=Glycine max GN=PM23 PE=2 SV=1 Length = 404
Score = 102 bits (253), Expect = 2e-20 Identities = 54/133 (40%), Positives = 80/133 (60%) Frame = +2
Query: 5 VGEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKGTQLDNG 184 VGEEKNDLLDYLRSL P++VA+LS+ TSPE+++ I V++GLL + + K+ K + + Sbjct: 266 VGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKDTILSVVHGLLATLSPKMHSKPSTMSEN 325
Query: 185 TVSSLSSPWEDEXXXXXXXXXXXXXXAVIVSRDHLARLLFWCMLLGHHMRGLEYRLELSR 364 T ++ ++ + ++RD+LARLLFWCML + GL +L+ Sbjct: 326 TTVGATNAGSEDCAEVLENSALQFQPVISLTRDYLARLLFWCMLWDTILEGLSVDWKLTD 385
Query: 365 TLSLCGDLEPDVT 403 LSL D E DV+ Sbjct: 386 LLSLTSDAENDVS 398
>tr|Q2QN28|Q2QN28_ORYSJ Os12g0581700 protein OS=Oryza sativa subsp. japonica GN=Os12g0581700 PE=2 SV=2 Length = 393
Score = 99.4 bits (246), Expect = 1e-19 Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 3/129 (2%) Frame = +2
Query: 8 GEEKNDLLDYLRSLSPDKVAELSQPTSPEVEEVIQEVINGLLDSPATKLQQKGTQLDN-- 181 GEEKN+LL YLRSLSP+KV ELS+ + P VEE + V++GLL + + K+ + Sbjct: 262 GEEKNELLYYLRSLSPEKVVELSESSCPGVEEAVYSVVHGLLATLSPKMHTNRSPTSENM 321
Query: 182 -GTVSSLSSPWEDEXXXXXXXXXXXXXXAVIVSRDHLARLLFWCMLLGHHMRGLEYRLEL 358 G + +DE + + RD LARLLFWCM+LGH++RG E RLEL Sbjct: 322 AGGAVNFGMEEDDEFTELVEDVSLPFQPLISIPRDRLARLLFWCMMLGHYIRGQECRLEL 381
Query: 359 SRTLSLCGD 385 L++ D Sbjct: 382 MHLLAVSSD 390
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