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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960509
Clone id TST39A01NGRL0007_J20
Library
Length 682
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_J20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTAAAGGTTCTAGCTGCGAATTAGGGTTTGAGTTGTTGCAGAGAGGCGGAGATGGTGGC
GCCGAAGCTCAGAGTTCCCGAGATCGCAGACAATCAAGATGGCTGGGGACCTCCAGAGGC
TGCGGCGGCATTGCAGAATCAACTGCAGAATGTGCCGTACGCACCCTTCTCTAAGTCTGA
TCGCTTGGGGAGAGTAGCAGATTTCACAAGAGGAGGATTTCCGTCTCGTGGAGGAGGTGG
AGGAAGAGGAGGGGGCGCTCTTGCTGAATATAGCGTTTTTGATTTCGCTTATGATGATGC
CGACGAGCTCTCCTTCCGCCTGGTTGATGGTAAGCCCCCTCCCCGTCCTCGTTTTGGCCC
TCGTTGGCGTATGCAGCAGCAGAAGCAGCTCCCTCAGCGTAAAGATGAGGAAGTGGAGGC
TCGCCGCCGGGAGGCTGAGAAGGACAAGCTCCGCCGCGACCGCTTCTACAATCAGAACCG
CAATCAACCTCGCCGTGAGGCTGCTGTATTCCGCAGCTCTGTTGATATTCAGCCCGAGTG
GACCATGCTTGACCAGATCCCCTTCACCACCTTCTCTAAGCTCAGCTTCAATGTTGGTGA
ACCTGAAGACATCCTCATGTGTGGTGCCCTTGAGTACTATGACAAGACATATGATCGCGT
CACTCCCAAAAATGATCGCCGT
■■Homology search results ■■ -
sp_hit_id P56820
Definition sp|P56820|EIF3D_ARATH Eukaryotic translation initiation factor 3 subunit D OS=Arabidopsis thaliana
Align length 240
Score (bit) 144.0
E-value 6.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960509|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_J20, 5'
         (682 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P56820|EIF3D_ARATH Eukaryotic translation initiation factor 3...   144   6e-34
sp|Q7QBW3|EIF3D_ANOGA Eukaryotic translation initiation factor 3...    86   2e-16
sp|Q16UF8|EIF3D_AEDAE Eukaryotic translation initiation factor 3...    84   7e-16
sp|B4N8Z4|EI3D2_DROWI Eukaryotic translation initiation factor 3...    83   2e-15
sp|Q0ZB77|EIF3D_BOMMO Eukaryotic translation initiation factor 3...    82   3e-15
sp|Q5KMK1|EIF3D_CRYNE Eukaryotic translation initiation factor 3...    81   5e-15
sp|B0X6P7|EIF3D_CULQU Eukaryotic translation initiation factor 3...    80   1e-14
sp|B4K892|EI3D1_DROMO Eukaryotic translation initiation factor 3...    78   5e-14
sp|Q7ZTM9|EIF3D_XENLA Eukaryotic translation initiation factor 3...    77   9e-14
sp|B3LZN3|EI3D2_DROAN Eukaryotic translation initiation factor 3...    77   1e-13
sp|Q6AYK8|EIF3D_RAT Eukaryotic translation initiation factor 3 s...    76   1e-13
sp|O70194|EIF3D_MOUSE Eukaryotic translation initiation factor 3...    76   1e-13
sp|Q3T122|EIF3D_BOVIN Eukaryotic translation initiation factor 3...    76   1e-13
sp|Q5R925|EIF3D_PONAB Eukaryotic translation initiation factor 3...    76   2e-13
sp|Q4R8R4|EIF3D_MACFA Eukaryotic translation initiation factor 3...    76   2e-13
sp|O15371|EIF3D_HUMAN Eukaryotic translation initiation factor 3...    76   2e-13
sp|Q295S1|EI3D2_DROPS Eukaryotic translation initiation factor 3...    76   2e-13
sp|B4LYI3|EI3D1_DROVI Eukaryotic translation initiation factor 3...    75   2e-13
sp|Q6P8G0|EIF3D_XENTR Eukaryotic translation initiation factor 3...    75   4e-13
sp|B3LY71|EI3D1_DROAN Eukaryotic translation initiation factor 3...    75   4e-13
sp|B4GFS1|EI3D2_DROPE Eukaryotic translation initiation factor 3...    74   6e-13
sp|B4NLG2|EI3D1_DROWI Eukaryotic translation initiation factor 3...    74   6e-13
sp|Q6TH15|EIF3D_DANRE Eukaryotic translation initiation factor 3...    74   7e-13
sp|B4QT07|EI3D2_DROSI Eukaryotic translation initiation factor 3...    73   2e-12
sp|B4HHG8|EI3D2_DROSE Eukaryotic translation initiation factor 3...    73   2e-12
sp|Q9VGC7|EI3D2_DROME Eukaryotic translation initiation factor 3...    69   3e-11
sp|B4KDI2|EI3D2_DROMO Eukaryotic translation initiation factor 3...    64   6e-10
sp|Q554U9|EIF3D_DICDI Eukaryotic translation initiation factor 3...    64   7e-10
sp|B4JUM0|EI3D2_DROGR Eukaryotic translation initiation factor 3...    63   2e-09
sp|B4JTN0|EI3D1_DROGR Eukaryotic translation initiation factor 3...    60   8e-09

>sp|P56820|EIF3D_ARATH Eukaryotic translation initiation factor 3
           subunit D OS=Arabidopsis thaliana GN=TIF3D1 PE=2 SV=1
          Length = 591

 Score =  144 bits (362), Expect = 6e-34
 Identities = 92/240 (38%), Positives = 114/240 (47%), Gaps = 30/240 (12%)
 Frame = +2

Query: 53  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX----------VPYAPFSKSDRLGRVAD 202
           MV        +  N DGWGPP+                     VP+A FS+SD+LGRVAD
Sbjct: 1   MVTEAFEFVAVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVAD 60

Query: 203 FTXXXXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXX 340
           +T                  +  +VFDF+    DE               +FRLVDGK  
Sbjct: 61  WTRNLSNPSARPNTGSKSDPS--AVFDFSAFAIDEGFGLASSGGNPDEDAAFRLVDGKPP 118

Query: 341 XXXXXXXXXXMQ---QQKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRNQ---PRREA 502
                           + QLPQ                       YN NRN     RREA
Sbjct: 119 PRPKFGPKWRFNPHHNRNQLPQRRDEEVEAKKRDAEKERARRDRLYNNNRNNIHHQRREA 178

Query: 503 AVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDRVTPKNDRR 682
           A F+SSVDIQPEW ML+QIPF+TFSKLS+ V EPED+L+CG LEYY++ +DR+TPKN+RR
Sbjct: 179 AAFKSSVDIQPEWNMLEQIPFSTFSKLSYTVQEPEDLLLCGGLEYYNRLFDRITPKNERR 238


>sp|Q7QBW3|EIF3D_ANOGA Eukaryotic translation initiation factor 3
           subunit D OS=Anopheles gambiae GN=eIF3-S7 PE=3 SV=3
          Length = 584

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
 Frame = +2

Query: 77  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 256
           P++  N+DGWGP E           +PY PFSKSDRLG+++D+T                
Sbjct: 17  PQLQFNEDGWGPCELPDAFKD----IPYQPFSKSDRLGKISDWTGTAQTDKKFSNKYASQ 72

Query: 257 --ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXM--QQQKQLPQXXXXXXXXX 424
               ++Y+ F     + DE +F LVD                  +  +  +         
Sbjct: 73  FGGGSQYAYFH----EEDETTFHLVDSARIQKPPHQRGRFRGNMRNNRSGRGRGARGGVQ 128

Query: 425 XXXXXXXXXXXXXFYNQNRNQPRR------EAAVFRSSVDIQPEWTMLDQIPFTTFSKLS 586
                          +Q R   R+         +  +SV ++P+W  ++++ F   +KLS
Sbjct: 129 VGGMTTLSKSANKMRDQRRGTTRKWGMRGPPPKIRDASVTVRPDWVTIEEMDFPRLAKLS 188

Query: 587 F-NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
             +V E EDI+ CG LEYYDKTYDRV  KN+R
Sbjct: 189 LPSVKEGEDIMTCGTLEYYDKTYDRVNVKNER 220


>sp|Q16UF8|EIF3D_AEDAE Eukaryotic translation initiation factor 3
           subunit D OS=Aedes aegypti GN=eIF3-S7 PE=3 SV=1
          Length = 619

 Score = 84.0 bits (206), Expect = 7e-16
 Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
 Frame = +2

Query: 77  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 256
           P++  N++GWGP E           +PY PFSKSDRLG+++D+T                
Sbjct: 17  PQLQFNEEGWGPCELPDAFKD----IPYQPFSKSDRLGKISDWTGTAQTDKKYPNKYASQ 72

Query: 257 ALA--EYSVFDFAYDDADELSFRLVDG-KXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXX 427
                +Y+     Y + DE +F LVD  +               + Q  +          
Sbjct: 73  FGGGNQYAY----YHEEDETTFHLVDSARIQKQPHQRGRFRGNLRNQRGRGRGGRGGVQA 128

Query: 428 XXXXXXXXXXXXFYNQNRNQPRREAA-----VFRSSVDIQPEWTMLDQIPFTTFSKLSF- 589
                         +Q R   R+  A     +  +SV ++P+W  ++++ F   SKLS  
Sbjct: 129 GGMTTLSKNATKGRDQRRGTTRKWGARPPPKIRDASVAVRPDWVTVEEMDFPRLSKLSLP 188

Query: 590 NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
           NV + EDI  CG LEYYDKTYDRV  KN++
Sbjct: 189 NVEKGEDITTCGTLEYYDKTYDRVNVKNEK 218


>sp|B4N8Z4|EI3D2_DROWI Eukaryotic translation initiation factor 3
           subunit D-2 OS=Drosophila willistoni GN=eIF3-S7-2 PE=3
           SV=1
          Length = 550

 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 64/216 (29%), Positives = 90/216 (41%), Gaps = 15/216 (6%)
 Frame = +2

Query: 77  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 256
           P +  N+ GWGP E           VPY PFSKSDRLG++ D+T                
Sbjct: 11  PYMQYNEHGWGPCELDVVD------VPYQPFSKSDRLGKITDWTVTQQDKKFTNKYAS-- 62

Query: 257 ALAEYSVFDFAYDDADELSFRLVDG------KXXXXXXXXXXXXMQQQKQLPQXXXXXXX 418
           +    + + + +++ DE SFRLVD       K                + +         
Sbjct: 63  SFGNNNQYAYFHEEDDE-SFRLVDSVGSKVIKPYQRGRGFRPSVHNNPRNVRNQRGRKGN 121

Query: 419 XXXXXXXXXXXXXXXFYNQNRNQPRREAAVFR--------SSVDIQPEWTMLDQIPFTTF 574
                           Y + R+  R +   +R        SSV +Q +W  + +I F   
Sbjct: 122 AMGNIMGPGLASITQRYGKGRDGRRNQGRKYRNLPARLRESSVVVQSDWVSVKEIDFPRL 181

Query: 575 SKLSF-NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
            KLS  N+ E EDI+ CGAL+YYDK YDRV  KN+R
Sbjct: 182 LKLSLPNMKEGEDIVTCGALDYYDKAYDRVNLKNER 217


>sp|Q0ZB77|EIF3D_BOMMO Eukaryotic translation initiation factor 3
           subunit D OS=Bombyx mori GN=eIF3-S7 PE=2 SV=1
          Length = 549

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 62/210 (29%), Positives = 86/210 (40%), Gaps = 9/210 (4%)
 Frame = +2

Query: 77  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 256
           P I DN  GWGP E           +PY PFSK DRLG+++D+T                
Sbjct: 17  PIIQDNPTGWGPYEMPDQFRD----MPYQPFSKGDRLGKISDWTMVQDKKYQNKYASQFG 72

Query: 257 ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXXX 436
           A + Y+ F     D DE +F LVD              +Q+  Q  Q             
Sbjct: 73  AGSSYAYFH----DEDESTFHLVD-----------TTRVQKPYQSYQRGRARGQRGRGAR 117

Query: 437 XXXXXXXXXFYNQNRN--------QPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSF- 589
                      N+ R         Q      +  +SV ++P W  ++ + F   +KLS  
Sbjct: 118 GARTPGGMTTLNKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLP 177

Query: 590 NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
            + E EDI+ CG LEYYDK YDRV  K+++
Sbjct: 178 GIKEGEDIVSCGTLEYYDKAYDRVNVKHEK 207


>sp|Q5KMK1|EIF3D_CRYNE Eukaryotic translation initiation factor 3
           subunit D OS=Cryptococcus neoformans GN=CNB01420 PE=3
           SV=1
          Length = 547

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
 Frame = +2

Query: 74  VPEIADNQDG-WGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXX 250
           +P I DN DG WGP             +PYAPFSKSD++ R+AD+               
Sbjct: 6   LPPIHDNSDGSWGPSTSTLPAQFKD--IPYAPFSKSDKITRIADWHDPQAEAAAGTRTAR 63

Query: 251 XX---------ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXX 403
                        AE +VF F +D+ DE SF LVD               +  + +    
Sbjct: 64  TVQSGGRRTAYGAAEGTVFGFVHDE-DEKSFSLVDSGVRVGARGKAPIRGRSVRGVASAR 122

Query: 404 XXXXXXXXXXXXXXXXXXXX----FYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTT 571
                                   + + N+ Q  R+     SSV I PEW +L++I F  
Sbjct: 123 GARGRGGQRGGFSTRGGRGGARGGYGDWNKPQRTRD-----SSVTIGPEWEVLEEIDFNR 177

Query: 572 FSKLSFNVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
            SKLS +V +PED+   G ++ YDKT+DR+  +N++
Sbjct: 178 LSKLSLSVEDPEDLASYGTVQAYDKTFDRINTRNEK 213


>sp|B0X6P7|EIF3D_CULQU Eukaryotic translation initiation factor 3
           subunit D OS=Culex quinquefasciatus GN=eIF3-S7 PE=3 SV=1
          Length = 612

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 15/216 (6%)
 Frame = +2

Query: 77  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 256
           P++  N++GWGP E           +PY PFSKSDRLG+++D+T                
Sbjct: 17  PQLQFNEEGWGPCELPDAFRD----IPYQPFSKSDRLGKISDWTGTAQTDKKYSNKYNSQ 72

Query: 257 --ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXX 430
               ++Y+     Y + DE +F LVD                  +               
Sbjct: 73  FGGGSQYAY----YHEEDETTFHLVDSARVQKPPHQRGRFRGNMR-----GNRGRGRGNR 123

Query: 431 XXXXXXXXXXXFYNQNRNQPRREAAVFR------------SSVDIQPEWTMLDQIPFTTF 574
                        N N+ + +R     +            +SV ++P+W  ++++ F   
Sbjct: 124 GGVQGGGMTNLSKNANKGRDQRRGTTRKWGNRMPPPKIRDASVAVRPDWVTIEEMDFPRL 183

Query: 575 SKLSF-NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
           SKLS  +V E EDI  CG LEYYDK YDRV  KN++
Sbjct: 184 SKLSLPSVKEGEDISTCGTLEYYDKVYDRVNVKNEK 219


>sp|B4K892|EI3D1_DROMO Eukaryotic translation initiation factor 3
           subunit D-1 OS=Drosophila mojavensis GN=eIF3-S7-1 PE=3
           SV=1
          Length = 563

 Score = 77.8 bits (190), Expect = 5e-14
 Identities = 59/218 (27%), Positives = 84/218 (38%), Gaps = 12/218 (5%)
 Frame = +2

Query: 62  PKLRVPEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXX 241
           P    P +  N+ GWGP E           VPY PFSK+DRLG++ D+T           
Sbjct: 12  PSFEKPTVQFNEKGWGPCELPDTFKD----VPYQPFSKNDRLGKICDWTSTSNNDKKYQN 67

Query: 242 XXXXXALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXX 421
                     + + + Y + DE +F LVD                 +    +        
Sbjct: 68  KYAS-TFGTGNQYAY-YHEEDETTFHLVDTARVQKPPHQRGRFRNMRNS--RSGRGRNAR 123

Query: 422 XXXXXXXXXXXXXXFYNQNRNQPRREAA-----------VFRSSVDIQPEWTMLDQIPFT 568
                           N     PRR              +  SSV ++ +W  ++++ F 
Sbjct: 124 GGLNTHGHGMTTLNSKNVKARDPRRGVGKRFGNRGPPPKMRESSVAVRADWASIEEMDFP 183

Query: 569 TFSKLSF-NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
              KLS  N+ E EDI  CG LEYYDKTYDR+  KN++
Sbjct: 184 RLMKLSLPNIKEGEDITTCGTLEYYDKTYDRINVKNEK 221


>sp|Q7ZTM9|EIF3D_XENLA Eukaryotic translation initiation factor 3
           subunit D OS=Xenopus laevis GN=eif3d PE=2 SV=1
          Length = 550

 Score = 77.0 bits (188), Expect = 9e-14
 Identities = 62/224 (27%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
 Frame = +2

Query: 65  KLRVPEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXX 244
           K + P I DN  GWGP             +PY PFSK DRLG+VAD+T            
Sbjct: 3   KFQAPVINDNALGWGP----CAIPDQFKDMPYQPFSKGDRLGKVADWTGATYQDKRYTNK 58

Query: 245 XXXX--ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXX 418
                   ++Y+ F     D DE SF+LVD                 Q+ L +       
Sbjct: 59  YSSQFGGGSQYAYFH----DEDETSFQLVDTTKMQKTAYQRNRMRFAQRNLRRDKDRRNM 114

Query: 419 XXXXXXXXXXXXXXXFYNQNRNQPR-------------REAAVFR---SSVDIQPEWTML 550
                            ++ R Q +             R  A  +   SSV+++ +W + 
Sbjct: 115 LQFNMQTLPKSAKQKERDRLRLQKKFQKQFGVRQKWDQRSQAQLKPRDSSVEVRSDWEVK 174

Query: 551 DQIPFTTFSKLSF-NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
           +++ F    K+ +  V +P DI  CGA+EYYDK +DR+T +N+R
Sbjct: 175 EEMDFPRLMKMRYMEVADPTDIECCGAVEYYDKAFDRITTRNER 218


>sp|B3LZN3|EI3D2_DROAN Eukaryotic translation initiation factor 3
           subunit D-2 OS=Drosophila ananassae GN=eIF3-S7-2 PE=3
           SV=1
          Length = 549

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 61/218 (27%), Positives = 89/218 (40%), Gaps = 17/218 (7%)
 Frame = +2

Query: 77  PEIADNQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXX 256
           P +  N+ GWGP E           VPY PF KSDRLG++ D+T                
Sbjct: 10  PYVQYNEHGWGPCEIPDMD------VPYQPFCKSDRLGKICDWTVAMQEKKFSNKYAS-- 61

Query: 257 ALAEYSVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQ-----------QQKQLPQXX 403
           +    S + + ++D D+ +F LVD               +           +  + P   
Sbjct: 62  SFGNNSQYAYFHED-DDSTFHLVDTSGSRALKPYQRGRFRPNVRNNARVKGRSGRGPGML 120

Query: 404 XXXXXXXXXXXXXXXXXXXXFYNQNRNQPRREAA-----VFRSSVDIQPEWTMLDQIPFT 568
                                    RNQ RR A      +  SSV ++P W  L++I F 
Sbjct: 121 GVAGSMAGGGTTSGSTKYGKGRESRRNQGRRFARNAPSRLRESSVLVRPNWVSLEEIEFP 180

Query: 569 TFSKLSF-NVGEPEDILMCGALEYYDKTYDRVTPKNDR 679
              KL+  N+ E +DI+ CG+LEYYDK YDR+  +N+R
Sbjct: 181 RLLKLALPNIKEGQDIVTCGSLEYYDKLYDRINLRNER 218
tr_hit_id A9S6P9
Definition tr|A9S6P9|A9S6P9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 197
Score (bit) 177.0
E-value 7.0e-43
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960509|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_J20, 5'
         (682 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S6P9|A9S6P9_PHYPA Predicted protein (Fragment) OS=Physcomit...   177   7e-43
tr|A9RBL3|A9RBL3_PHYPA Predicted protein (Fragment) OS=Physcomit...   175   3e-42
tr|B7FLT6|B7FLT6_MEDTR Putative uncharacterized protein OS=Medic...   150   6e-35
tr|Q9FKV6|Q9FKV6_ARATH Eukaryotic translation initiation factor ...   148   3e-34
tr|Q1EPJ8|Q1EPJ8_MUSAC Eukaryotic translation initiation factor ...   147   8e-34
tr|Q8VZ60|Q8VZ60_ARATH Putative translation initiation factor eI...   144   7e-33
tr|B5X0N5|B5X0N5_ARATH At4g20980 OS=Arabidopsis thaliana PE=2 SV=1    144   7e-33
tr|B6U4Q2|B6U4Q2_MAIZE Eukaryotic translation initiation factor ...   137   6e-31
tr|B4G0T3|B4G0T3_MAIZE Putative uncharacterized protein OS=Zea m...   137   6e-31
tr|B4FWK0|B4FWK0_MAIZE Putative uncharacterized protein OS=Zea m...   137   6e-31
tr|Q688X1|Q688X1_ORYSJ cDNA clone:001-031-F02, full insert seque...   126   1e-27
tr|Q0DFW6|Q0DFW6_ORYSJ Os05g0566500 protein (Fragment) OS=Oryza ...   126   1e-27
tr|A2Y7J4|A2Y7J4_ORYSI Putative uncharacterized protein OS=Oryza...   126   1e-27
tr|A9NUG7|A9NUG7_PICSI Putative uncharacterized protein OS=Picea...   118   4e-25
tr|Q9C5Y8|Q9C5Y8_ARATH Initiation factor 3d (Fragment) OS=Arabid...   108   2e-22
tr|A3BS00|A3BS00_ORYSJ Putative uncharacterized protein OS=Oryza...    96   2e-18
tr|A9SLQ4|A9SLQ4_PHYPA Predicted protein (Fragment) OS=Physcomit...    88   4e-16
tr|B6LDD9|B6LDD9_BRAFL Putative uncharacterized protein OS=Branc...    85   5e-15
tr|B6L088|B6L088_BRAFL Putative uncharacterized protein OS=Branc...    85   5e-15
tr|B3RPZ1|B3RPZ1_TRIAD Putative uncharacterized protein OS=Trich...    83   2e-14
tr|B4DTF8|B4DTF8_HUMAN cDNA FLJ53917, highly similar to Eukaryot...    81   7e-14
tr|Q5ZKM9|Q5ZKM9_CHICK Putative uncharacterized protein OS=Gallu...    78   6e-13
tr|Q4SAW6|Q4SAW6_TETNG Chromosome 3 SCAF14679, whole genome shot...    77   1e-12
tr|B2R7D4|B2R7D4_HUMAN cDNA, FLJ93391, Homo sapiens eukaryotic t...    76   2e-12
tr|B0QYA5|B0QYA5_HUMAN Eukaryotic translation initiation factor ...    76   2e-12
tr|A8MWD3|A8MWD3_HUMAN Putative uncharacterized protein EIF3D OS...    76   2e-12
tr|B0CXD3|B0CXD3_LACBS Predicted protein OS=Laccaria bicolor (st...    74   7e-12
tr|Q5DAD4|Q5DAD4_SCHJA SJCHGC06210 protein OS=Schistosoma japoni...    69   3e-10
tr|B7PYZ6|B7PYZ6_IXOSC Eukaryotic translation initiation factor ...    68   6e-10
tr|A8NJB2|A8NJB2_BRUMA Translation initiation factor 3 subunit 7...    60   1e-07

>tr|A9S6P9|A9S6P9_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_12801 PE=4 SV=1
          Length = 514

 Score =  177 bits (448), Expect = 7e-43
 Identities = 95/197 (48%), Positives = 113/197 (57%)
 Frame = +2

Query: 92  NQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXALAEY 271
           N DGWGPP+           VPYAPF KS  LGR +D+T                     
Sbjct: 1   NTDGWGPPDENATLPSQLQNVPYAPFIKSTHLGRASDWTRNPPSRYGQNRGGD------- 53

Query: 272 SVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXXXXXXXX 451
            VFD+ +D+ DE SFRLVDGK             QQ+ QLPQ                  
Sbjct: 54  GVFDYFFDEQDEESFRLVDGKPPARPKFGPRWRFQQKPQLPQRKDEEDARRKEAEKERLR 113

Query: 452 XXXXFYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGAL 631
               FYNQNRN  RRE A F+SSVDIQP+WTML+QIPF+TF+KL++ VGE ED+ +CGAL
Sbjct: 114 RDK-FYNQNRNLQRRETATFKSSVDIQPDWTMLEQIPFSTFAKLNYFVGEAEDLALCGAL 172

Query: 632 EYYDKTYDRVTPKNDRR 682
           EYYDKTYDRVTPK++RR
Sbjct: 173 EYYDKTYDRVTPKSERR 189


>tr|A9RBL3|A9RBL3_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_22044 PE=4 SV=1
          Length = 513

 Score =  175 bits (443), Expect = 3e-42
 Identities = 93/197 (47%), Positives = 114/197 (57%)
 Frame = +2

Query: 92  NQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXALAEY 271
           N DGWGPP+           VPYAPF KS  LGR +D+T                     
Sbjct: 1   NLDGWGPPDENATLPSQLQNVPYAPFIKSTHLGRASDWTRNPPNRFNQNRGD-------- 52

Query: 272 SVFDFAYDDADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXXXXXXXX 451
            VFD+ +D+ DE SFRLVDGK             QQ+ QLPQ                  
Sbjct: 53  GVFDYFFDEQDEESFRLVDGKPPARPKFGPRWRFQQKPQLPQRKDEEDARRKEAEKERLR 112

Query: 452 XXXXFYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGAL 631
               FYNQNRN  RRE A F+SSVDIQP+WT+L+QIPF+TF+KL+++VGE ED+ +CGAL
Sbjct: 113 RDK-FYNQNRNLQRRETATFKSSVDIQPDWTILEQIPFSTFAKLNYSVGEAEDLALCGAL 171

Query: 632 EYYDKTYDRVTPKNDRR 682
           E+YDKTYDRVTPK++RR
Sbjct: 172 EFYDKTYDRVTPKSERR 188


>tr|B7FLT6|B7FLT6_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 297

 Score =  150 bits (380), Expect = 6e-35
 Identities = 87/203 (42%), Positives = 104/203 (51%), Gaps = 6/203 (2%)
 Frame = +2

Query: 92  NQDGWGPPEXXXXXXXXXXXVPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXALAEY 271
           N DGWGP E           VP+APFS+SD+LGR+AD+T                  A  
Sbjct: 15  NPDGWGPLESTADNTN----VPFAPFSRSDKLGRIADWTRNFNNNNNPNRSKNPADTA-- 68

Query: 272 SVFDFAYDDA------DELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQXXXXXXXXXXXX 433
             FDF  D +      D+ SFRLVDGK             Q+Q QLPQ            
Sbjct: 69  --FDFTSDPSFPNFAEDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEAKKRE 126

Query: 434 XXXXXXXXXXFYNQNRNQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDI 613
                      Y    N       +F+SSVDIQPEW M DQIPF+TFSKLSF V EPED+
Sbjct: 127 AEKERARRDRHYQSRSNPSNHRRELFKSSVDIQPEWNMHDQIPFSTFSKLSFTVSEPEDL 186

Query: 614 LMCGALEYYDKTYDRVTPKNDRR 682
           L+CGALE YD++YDR+ PKN+RR
Sbjct: 187 LLCGALESYDRSYDRIAPKNERR 209


>tr|Q9FKV6|Q9FKV6_ARATH Eukaryotic translation initiation factor 3
           subunit 7 OS=Arabidopsis thaliana GN=At5g44320 PE=2 SV=1
          Length = 588

 Score =  148 bits (374), Expect = 3e-34
 Identities = 94/236 (39%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
 Frame = +2

Query: 53  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX------VPYAPFSKSDRLGRVADFTXX 214
           MV     V  +  N DGWGPP+                 VP+A FS+S++LGRVAD+T  
Sbjct: 1   MVFEAFEVGTVPFNSDGWGPPDASDTSSTSVAAANLLPNVPFASFSRSEKLGRVADWTRA 60

Query: 215 XXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXXXXXX 352
                           +  ++FDF+    DE               +FRLVDGK      
Sbjct: 61  LSNPSARPHTGSKSDPS--AIFDFSAFAVDEGFGLTNSGGNADEDAAFRLVDGKPPPRPK 118

Query: 353 XXXXXXMQQ---QKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRN---QPRREAAVFR 514
                   Q   + QLPQ                       YN NRN   Q RREAA F+
Sbjct: 119 FGPKWRFNQYHNRNQLPQRRDEEVEAKKREAEKDRARRDRLYNNNRNNIHQQRREAAAFK 178

Query: 515 SSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDRVTPKNDRR 682
           SSVDIQPEW ML+QIPF+TFSKLSF V EPED+L+CG LE YD+++DR+TPK DRR
Sbjct: 179 SSVDIQPEWNMLEQIPFSTFSKLSFTVSEPEDLLLCGGLESYDRSFDRITPKADRR 234


>tr|Q1EPJ8|Q1EPJ8_MUSAC Eukaryotic translation initiation factor 3
           (EIF-3), putative OS=Musa acuminata GN=MA4_25J11.34 PE=4
           SV=1
          Length = 597

 Score =  147 bits (370), Expect = 8e-34
 Identities = 92/226 (40%), Positives = 114/226 (50%), Gaps = 29/226 (12%)
 Frame = +2

Query: 92  NQDGWGPPEXXXXXXXXXXX---------VPYAPFSKSDRLGRVADFTXXXXXXXXXXXX 244
           N DGWGPPE                    +P+APFS+S++LGRVAD+T            
Sbjct: 11  NTDGWGPPESPAAPLLLSRNDGESTQPANIPFAPFSRSEKLGRVADWTRNPNFGNNAARS 70

Query: 245 XXXXALAEYSVFDFAYDD--------ADELSFRLVDGKXXXXXXXXXXXXMQQQKQLPQX 400
               A    +VFDFA D+        AD+ SFRLVDGK             QQ+ QLPQ 
Sbjct: 71  ----AGGRDAVFDFAVDESSALSGAAADDSSFRLVDGKPPPRPKFGPRWRFQQRPQLPQR 126

Query: 401 XXXXXXXXXXXXXXXXXXXXXFYNQNRNQ-----------PRREAAVFRSSVDIQPEWTM 547
                                 Y  N                R+A   +SSVDIQPEWTM
Sbjct: 127 RDEEVEARKREAEKERARRDRLYRLNHRSYASAGGHGAAGSHRDAPARKSSVDIQPEWTM 186

Query: 548 LDQIPFTTFSKLSFNVGE-PEDILMCGALEYYDKTYDRVTPKNDRR 682
           LDQIPF+TFSKLSF+V + PED+L+CGALE+YD+++DRV PKN+RR
Sbjct: 187 LDQIPFSTFSKLSFSVPDPPEDLLVCGALEFYDRSFDRVNPKNERR 232


>tr|Q8VZ60|Q8VZ60_ARATH Putative translation initiation factor eIF3
           OS=Arabidopsis thaliana GN=At4g20980 PE=2 SV=1
          Length = 591

 Score =  144 bits (362), Expect = 7e-33
 Identities = 92/240 (38%), Positives = 114/240 (47%), Gaps = 30/240 (12%)
 Frame = +2

Query: 53  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX----------VPYAPFSKSDRLGRVAD 202
           MV        +  N DGWGPP+                     VP+A FS+SD+LGRVAD
Sbjct: 1   MVTEAFEFVAVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVAD 60

Query: 203 FTXXXXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXX 340
           +T                  +  +VFDF+    DE               +FRLVDGK  
Sbjct: 61  WTRNLSNPSARPNTGSKSDPS--AVFDFSAFAIDEGFGLASSGGNPDEDAAFRLVDGKPP 118

Query: 341 XXXXXXXXXXMQ---QQKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRNQ---PRREA 502
                           + QLPQ                       YN NRN     RREA
Sbjct: 119 PRPKFGPKWRFNPHHNRNQLPQRRDEEVEAKKRDAEKERARRDRLYNNNRNNIHHQRREA 178

Query: 503 AVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDRVTPKNDRR 682
           A F+SSVDIQPEW ML+QIPF+TFSKLS+ V EPED+L+CG LEYY++ +DR+TPKN+RR
Sbjct: 179 AAFKSSVDIQPEWNMLEQIPFSTFSKLSYTVQEPEDLLLCGGLEYYNRLFDRITPKNERR 238


>tr|B5X0N5|B5X0N5_ARATH At4g20980 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 591

 Score =  144 bits (362), Expect = 7e-33
 Identities = 92/240 (38%), Positives = 114/240 (47%), Gaps = 30/240 (12%)
 Frame = +2

Query: 53  MVAPKLRVPEIADNQDGWGPPEXXXXXXXXXXX----------VPYAPFSKSDRLGRVAD 202
           MV        +  N DGWGPP+                     VP+A FS+SD+LGRVAD
Sbjct: 1   MVTEAFEFVAVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVAD 60

Query: 203 FTXXXXXXXXXXXXXXXXALAEYSVFDFAYDDADE--------------LSFRLVDGKXX 340
           +T                  +  +VFDF+    DE               +FRLVDGK  
Sbjct: 61  WTRNLSNPSARPNTGSKSDPS--AVFDFSAFAIDEGFGLASSGGNPDEDAAFRLVDGKPP 118

Query: 341 XXXXXXXXXXMQ---QQKQLPQXXXXXXXXXXXXXXXXXXXXXXFYNQNRNQ---PRREA 502
                           + QLPQ                       YN NRN     RREA
Sbjct: 119 PRPKFGPKWRFNPHHNRNQLPQRRDEEVEAKKRDAEKERARRDRLYNNNRNNIHHQRREA 178

Query: 503 AVFRSSVDIQPEWTMLDQIPFTTFSKLSFNVGEPEDILMCGALEYYDKTYDRVTPKNDRR 682
           A F+SSVDIQPEW ML+QIPF+TFSKLS+ V EPED+L+CG LEYY++ +DR+TPKN+RR
Sbjct: 179 AAFKSSVDIQPEWNMLEQIPFSTFSKLSYTVQEPEDLLLCGGLEYYNRLFDRITPKNERR 238


>tr|B6U4Q2|B6U4Q2_MAIZE Eukaryotic translation initiation factor 3
           subunit 7 OS=Zea mays PE=2 SV=1
          Length = 580

 Score =  137 bits (345), Expect = 6e-31
 Identities = 88/215 (40%), Positives = 113/215 (52%), Gaps = 18/215 (8%)
 Frame = +2

Query: 92  NQDGWGPPEXXXXXXXXXXX---VPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXAL 262
           N DGWGPPE              VP+APFS+SD+LGR+AD+T                A 
Sbjct: 11  NPDGWGPPEVAAAPPSLGGGSSSVPFAPFSRSDKLGRIADWTRNPPGPGAF-------AA 63

Query: 263 AEYSVFDFA-------YDDADELSFRLVDGKXXXXXXXXXXXX-MQQQKQLPQXXXXXXX 418
           A  +VFDFA          AD+ SFRLVDGK              QQ+ QLPQ       
Sbjct: 64  ARDAVFDFAGLEDSIGLASADDSSFRLVDGKPPPRHPRFGPRWRFQQRPQLPQRRDEEVE 123

Query: 419 XXXXXXXXXXXXXXXFYNQNR------NQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSK 580
                           + QNR      N+    ++  + SVDIQPEW++ +QIPF++FSK
Sbjct: 124 ARRREAEKERARRDRHWQQNRRTHHQFNRGGPSSSSAKPSVDIQPEWSVKEQIPFSSFSK 183

Query: 581 LSFNVGE-PEDILMCGALEYYDKTYDRVTPKNDRR 682
           LSF V + PED+L+CGA+EYYD+TYDRVTP+ +RR
Sbjct: 184 LSFAVADQPEDLLVCGAVEYYDRTYDRVTPRAERR 218


>tr|B4G0T3|B4G0T3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 580

 Score =  137 bits (345), Expect = 6e-31
 Identities = 88/215 (40%), Positives = 113/215 (52%), Gaps = 18/215 (8%)
 Frame = +2

Query: 92  NQDGWGPPEXXXXXXXXXXX---VPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXAL 262
           N DGWGPPE              VP+APFS+SD+LGR+AD+T                A 
Sbjct: 11  NPDGWGPPEVAAAPPSLGGGSSSVPFAPFSRSDKLGRIADWTRNPPGPGAF-------AA 63

Query: 263 AEYSVFDFA-------YDDADELSFRLVDGKXXXXXXXXXXXX-MQQQKQLPQXXXXXXX 418
           A  +VFDFA          AD+ SFRLVDGK              QQ+ QLPQ       
Sbjct: 64  ARDAVFDFAGLEDSIGLASADDSSFRLVDGKPPPRHPRFGPRWRFQQRPQLPQRRDEEVE 123

Query: 419 XXXXXXXXXXXXXXXFYNQNR------NQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSK 580
                           + QNR      N+    ++  + SVDIQPEW++ +QIPF++FSK
Sbjct: 124 ARRREAEKERARRDRHWQQNRRTHHQFNRGGPSSSSAKPSVDIQPEWSVKEQIPFSSFSK 183

Query: 581 LSFNVGE-PEDILMCGALEYYDKTYDRVTPKNDRR 682
           LSF V + PED+L+CGA+EYYD+TYDRVTP+ +RR
Sbjct: 184 LSFAVADQPEDLLVCGAVEYYDRTYDRVTPRAERR 218


>tr|B4FWK0|B4FWK0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 580

 Score =  137 bits (345), Expect = 6e-31
 Identities = 88/215 (40%), Positives = 113/215 (52%), Gaps = 18/215 (8%)
 Frame = +2

Query: 92  NQDGWGPPEXXXXXXXXXXX---VPYAPFSKSDRLGRVADFTXXXXXXXXXXXXXXXXAL 262
           N DGWGPPE              VP+APFS+SD+LGR+AD+T                A 
Sbjct: 11  NPDGWGPPEVAAAPPSLGGGSSSVPFAPFSRSDKLGRIADWTRNPPGPGAF-------AA 63

Query: 263 AEYSVFDFA-------YDDADELSFRLVDGKXXXXXXXXXXXX-MQQQKQLPQXXXXXXX 418
           A  +VFDFA          AD+ SFRLVDGK              QQ+ QLPQ       
Sbjct: 64  ARDAVFDFAGLEDSIGLASADDSSFRLVDGKPPPRHPRFGPRWRFQQRPQLPQRRDEEVE 123

Query: 419 XXXXXXXXXXXXXXXFYNQNR------NQPRREAAVFRSSVDIQPEWTMLDQIPFTTFSK 580
                           + QNR      N+    ++  + SVDIQPEW++ +QIPF++FSK
Sbjct: 124 ARRREAEKERARRDRHWQQNRRTHHQFNRGGPSSSSAKPSVDIQPEWSVKEQIPFSSFSK 183

Query: 581 LSFNVGE-PEDILMCGALEYYDKTYDRVTPKNDRR 682
           LSF V + PED+L+CGA+EYYD+TYDRVTP+ +RR
Sbjct: 184 LSFAVADQPEDLLVCGAVEYYDRTYDRVTPRAERR 218