DK960522 |
Clone id |
TST39A01NGRL0007_K09 |
Library |
TST39 |
Length |
375 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_K09. 5' end sequence. |
Accession |
DK960522 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL367Contig1 |
Sequence |
TGCCAACTTTGTACCCCCGATGTAGGCCCCTACACAGACAAATAGCGCTCACCCCTTTGT AAAGTGCACACGCAGATCGTTGCTGTGAGTGAACAATCTTGTACTCAGACTTCTTTTTGG ACGATGGCTACTGTGGGCACCAACAACATGCAGGCGAAACTGGTGTTACTGGGAGACATG GGTGCTGGCAAATCAAGTTTGGGGTTACGTTTTGTCAAGGGAGAATTTCAGGAGTTCCAG GAATCGACAATTGGTGCTGCTTTTTTCTCTCAAACAGTTGCTGTGAATGAGACCACAGTA AAATTTGAAATTTGGGATACAGCTGGACAAGAGAGATATCATAGCTTGGCTCCTATGTAC TATCGAGGAGCTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31583 |
Definition |
sp|P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia |
Align length |
84 |
Score (bit) |
142.0 |
E-value |
5.0e-34 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKR1 |
Definition |
tr|A9NKR1|A9NKR1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
84 |
Score (bit) |
153.0 |
E-value |
4.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960522|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_K09, 5' (361 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKR1|A9NKR1_PICSI Putative uncharacterized protein OS=Picea... 153 4e-36 tr|Q9AW99|Q9AW99_9ASTR GTP binding protein OS=Cichorium intybus ... 151 1e-35 tr|Q41668|Q41668_VICFA Guanine nucleotide regulatory protein OS=... 151 1e-35 tr|Q40209|Q40209_LOTJA RAB5A OS=Lotus japonicus GN=rab5A PE=2 SV=1 151 1e-35 tr|A5AX18|A5AX18_VITVI Putative uncharacterized protein (Chromos... 151 1e-35 tr|A9TLP5|A9TLP5_PHYPA Rab5/RabF-family small GTPase OS=Physcomi... 150 3e-35 tr|Q9SBU1|Q9SBU1_9ASTR GTP binding protein (Fragment) OS=Cichori... 150 4e-35 tr|Q9AWA0|Q9AWA0_9ASTR GTP binding protein OS=Cichorium intybus ... 150 4e-35 tr|Q9SBU0|Q9SBU0_9ASTR GTP binding protein (Fragment) OS=Cichori... 149 9e-35 tr|A9NPA2|A9NPA2_PICSI Putative uncharacterized protein OS=Picea... 147 3e-34 tr|A9STK1|A9STK1_PHYPA Rab5/RabF-family small GTPase OS=Physcomi... 147 3e-34 tr|Q40570|Q40570_TOBAC Ras-related GTP-binding protein OS=Nicoti... 146 6e-34 tr|B8LP42|B8LP42_PICSI Putative uncharacterized protein OS=Picea... 145 1e-33 tr|A9P9C3|A9P9C3_POPTR Putative uncharacterized protein OS=Popul... 144 2e-33 tr|Q9AWA1|Q9AWA1_9ASTR GTP binding protein (Fragment) OS=Cichori... 143 4e-33 tr|Q84RR9|Q84RR9_SIMCH Rab-related small GTP-binding protein OS=... 143 4e-33 tr|Q9AWA2|Q9AWA2_9ASTR GTP binding protein (Fragment) OS=Cichori... 140 2e-32 tr|Q9SN68|Q9SN68_ARATH AT4g19640/F24J7_190 OS=Arabidopsis thalia... 140 3e-32 tr|Q42282|Q42282_ARATH RAS Related protein RHA1 (Fragment) OS=Ar... 140 3e-32 tr|B4F944|B4F944_MAIZE Putative uncharacterized protein OS=Zea m... 139 5e-32 tr|A7PER1|A7PER1_VITVI Chromosome chr11 scaffold_13, whole genom... 139 9e-32 tr|Q75HA2|Q75HA2_ORYSJ Os03g0666500 protein OS=Oryza sativa subs... 138 1e-31 tr|B4F7V6|B4F7V6_MAIZE Putative uncharacterized protein OS=Zea m... 138 1e-31 tr|A6N0X7|A6N0X7_ORYSI Ras-related protein rhn1 (Fragment) OS=Or... 138 1e-31 tr|A2ZPY6|A2ZPY6_ORYSJ Putative uncharacterized protein OS=Oryza... 138 1e-31 tr|A2XKD7|A2XKD7_ORYSI Putative uncharacterized protein OS=Oryza... 138 1e-31 tr|B6TVJ1|B6TVJ1_MAIZE Ras-related protein RHN1 OS=Zea mays PE=2... 138 2e-31 tr|B6SU67|B6SU67_MAIZE Ras-related protein RHN1 OS=Zea mays PE=2... 138 2e-31 tr|Q9FEV1|Q9FEV1_ORYSA RAB5A protein OS=Oryza sativa GN=rab5A PE... 136 6e-31 tr|Q2QLR7|Q2QLR7_ORYSJ Ras-related protein RHN1, putative, expre... 136 6e-31
>tr|A9NKR1|A9NKR1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 200
Score = 153 bits (387), Expect = 4e-36 Identities = 75/84 (89%), Positives = 79/84 (94%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT GTNNMQAKLVLLGDMG GKSSL LRFVKG+F ++QESTIGAAFFSQT+AVNE TVK Sbjct: 1 MATTGTNNMQAKLVLLGDMGTGKSSLVLRFVKGQFLDYQESTIGAAFFSQTLAVNEVTVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|Q9AW99|Q9AW99_9ASTR GTP binding protein OS=Cichorium intybus x Cichorium endivia GN=chi3154 PE=2 SV=1 Length = 200
Score = 151 bits (382), Expect = 1e-35 Identities = 74/84 (88%), Positives = 79/84 (94%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT+G NN+ AKLVLLGDMGAGKSSL LRFVKG+F EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|Q41668|Q41668_VICFA Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1 Length = 200
Score = 151 bits (382), Expect = 1e-35 Identities = 74/84 (88%), Positives = 79/84 (94%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT+G NN+ AKLVLLGDMGAGKSSL LRFVKG+F EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|Q40209|Q40209_LOTJA RAB5A OS=Lotus japonicus GN=rab5A PE=2 SV=1 Length = 200
Score = 151 bits (382), Expect = 1e-35 Identities = 74/84 (88%), Positives = 79/84 (94%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT+G NN+ AKLVLLGDMGAGKSSL LRFVKG+F EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|A5AX18|A5AX18_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_30, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00023506001 PE=3 SV=1 Length = 200
Score = 151 bits (382), Expect = 1e-35 Identities = 74/84 (88%), Positives = 79/84 (94%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT+G NN+ AKLVLLGDMGAGKSSL LRFVKG+F EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|A9TLP5|A9TLP5_PHYPA Rab5/RabF-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabF2A2 PE=3 SV=1 Length = 201
Score = 150 bits (379), Expect = 3e-35 Identities = 73/84 (86%), Positives = 79/84 (94%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT G N+MQAKLVLLGDMGAGKSSL LRFVKG+F ++QESTIGAAF +QT+AVNETTVK Sbjct: 1 MATTGANHMQAKLVLLGDMGAGKSSLALRFVKGQFFDYQESTIGAAFLTQTLAVNETTVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|Q9SBU1|Q9SBU1_9ASTR GTP binding protein (Fragment) OS=Cichorium intybus x Cichorium endivia GN=gtp1 PE=2 SV=1 Length = 200
Score = 150 bits (378), Expect = 4e-35 Identities = 73/84 (86%), Positives = 78/84 (92%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT+G NN+ AKLVLLGDMGAGKSSL LRFVKG+F EFQESTIGAAFFSQT+ VN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLVVNDATVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|Q9AWA0|Q9AWA0_9ASTR GTP binding protein OS=Cichorium intybus x Cichorium endivia GN=chi3152 PE=2 SV=1 Length = 200
Score = 150 bits (378), Expect = 4e-35 Identities = 73/84 (86%), Positives = 78/84 (92%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT+G NN+ AK VLLGDMGAGKSSL LRFVKG+F EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|Q9SBU0|Q9SBU0_9ASTR GTP binding protein (Fragment) OS=Cichorium intybus x Cichorium endivia GN=gtp2 PE=2 SV=1 Length = 200
Score = 149 bits (375), Expect = 9e-35 Identities = 73/84 (86%), Positives = 78/84 (92%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MAT+G NN+ AKLVLLGDMGAGKSSL L FVKG+F EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLLFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 FEIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAA 84
>tr|A9NPA2|A9NPA2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 200
Score = 147 bits (371), Expect = 3e-34 Identities = 73/84 (86%), Positives = 78/84 (92%) Frame = +2
Query: 110 MATVGTNNMQAKLVLLGDMGAGKSSLGLRFVKGEFQEFQESTIGAAFFSQTVAVNETTVK 289 MATVG N+QAKLVLLGDMGAGKSSL LRFVKG+F +QESTIGAAFFSQT+AVNET+VK Sbjct: 1 MATVGNKNVQAKLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVK 60
Query: 290 FEIWDTAGQERYHSLAPMYYRGAA 361 EIWDTAGQERYHSLAPMYYRGAA Sbjct: 61 LEIWDTAGQERYHSLAPMYYRGAA 84
|