DK960524
Clone id TST39A01NGRL0007_K11
Library
Length 608
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_K11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTTTCAACAAGTGCAGCAACAGTTGATGCAGAATCCTAATCTGATGCGGGATATGATGAA
CATGCCGGCCGTTCAAAGCTTGATGAACAATCCTGAACTTATGCGAAGTCTGATAATGAA
CAACCCACAGATGAGGAGTCTCATCGACAGGAATCCAGAACTGGGGCACATTTTAAATGA
TCCTAGCACTCTTCGTCAAACACTCGATGCTGCCCGGAACCCTGAATTAATGAGAGAGAT
GATGAGAAACACAGATCGCGCGATGAGCAACATTGAAGCATCTCCTGAGGGGTTCAACAT
GTTGAGGCGGATGTATGAGACAGTTGAGGAACCTTTTCTGAATGCTGCTACGGGTGCGGA
TGGAGGGAATGATGCGGCTGCCAATCCTTTTGCAGCTTTACTAGGAACGCAAGGGTTGCA
ACCTCAGGCAGGAGTGGCTCCTGCGGGAACAGCTACGGGCGCCACTACGACCACAACAGG
GACAGAGACTGTGGCACCAAACACAGCTCCGCTTCCAAATCCTTGGAATCCCTCTCAGAA
TGCCCCCAATGCGGGAACAGGTGGAGTCGTTGGCCAGACTCCTACAGGGAATTTAGGGGG
CCTATCTG
■■Homology search results ■■ -
sp_hit_id Q5R684
Definition sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii
Align length 101
Score (bit) 134.0
E-value 5.0e-31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960524|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K11, 5'
(608 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2... 134 5e-31
sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1... 134 5e-31
sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1... 134 5e-31
sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1... 131 3e-30
sp|Q9NRR5|UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1... 131 3e-30
sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 P... 130 5e-30
sp|Q9QZM0|UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1... 129 9e-30
sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1... 129 9e-30
sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ub... 124 4e-28
sp|Q8C5U9|UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2... 113 7e-25
sp|Q9H347|UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens GN=UBQLN3 PE=1... 103 5e-22
sp|Q5XIP4|UBQLN_RAT Ubiquilin-like protein OS=Rattus norvegicus ... 52 2e-06
sp|Q14DL0|UBQLN_MOUSE Ubiquilin-like protein OS=Mus musculus GN=... 49 2e-05
sp|Q8IYU4|UBQLN_HUMAN Ubiquilin-like protein OS=Homo sapiens GN=... 47 8e-05
sp|Q5AY89|DDI1_EMENI DNA damage-inducible protein 1 OS=Emericell... 41 0.004
sp|Q0CJ13|DDI1_ASPTN DNA damage-inducible protein 1 OS=Aspergill... 40 0.009
sp|Q0U3Y6|DDI1_PHANO DNA damage-inducible protein 1 OS=Phaeospha... 37 0.079
sp|P48510|DSK2_YEAST Ubiquitin domain-containing protein DSK2 OS... 36 0.13
sp|A0JPP7|DDI1_RAT Protein DDI1 homolog 1 OS=Rattus norvegicus G... 35 0.39
sp|Q10169|DSK2_SCHPO Deubiquitination-protection protein dph1 OS... 34 0.51
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 32 1.9
sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 O... 32 2.5
sp|Q4G055|RBM40_RAT RNA-binding protein 40 OS=Rattus norvegicus ... 31 4.3
sp|Q88UT2|RF1_LACPL Peptide chain release factor 1 OS=Lactobacil... 31 5.6
sp|Q7S906|DDI1_NEUCR DNA damage-inducible protein 1 OS=Neurospor... 31 5.6
sp|P43823|SYH_HAEIN Histidyl-tRNA synthetase OS=Haemophilus infl... 30 7.4
sp|Q4QNH3|SYH_HAEI8 Histidyl-tRNA synthetase OS=Haemophilus infl... 30 7.4
sp|P15377|RTX2A_ACTPL RTX-II toxin determinant A OS=Actinobacill... 30 7.4
sp|P10576|NTRC_BRASR Nitrogen assimilation regulatory protein OS... 30 7.4
sp|Q5XJE5|LEO1_MOUSE RNA polymerase-associated protein LEO1 OS=M... 30 7.4

>sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2
SV=1
Length = 589

Score = 134 bits (336), Expect = 5e-31
Identities = 60/101 (59%), Positives = 80/101 (79%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP +M +M P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P +RQTL+
Sbjct: 182 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLEL 241

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY ++EP
Sbjct: 242 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 282



Score = 42.0 bits (97), Expect = 0.002
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2

Query: 32 NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
NP LM++M++ P +QSL NP+L +++NNP L NP+L + P+ L
Sbjct: 387 NPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 442

Query: 194 RQ-----TLDAARNPELMREMMR 247
+Q TL A NP M+ +++
Sbjct: 443 QQMQNPDTLSAMSNPRAMQALLQ 465


>sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1
SV=1
Length = 582

Score = 134 bits (336), Expect = 5e-31
Identities = 60/101 (59%), Positives = 80/101 (79%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP +M +M P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P +RQTL+
Sbjct: 173 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLEL 232

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY ++EP
Sbjct: 233 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 273



Score = 42.0 bits (97), Expect = 0.002
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2

Query: 32 NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
NP LM++M++ P +QSL NP+L +++NNP L NP+L + P+ L
Sbjct: 381 NPQLMQNMLSAPYMRSMLQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 436

Query: 194 RQ-----TLDAARNPELMREMMR 247
+Q TL A NP M+ +++
Sbjct: 437 QQMQNPDTLSAMSNPRAMQALLQ 459


>sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1
SV=2
Length = 589

Score = 134 bits (336), Expect = 5e-31
Identities = 60/101 (59%), Positives = 80/101 (79%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP +M +M P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P +RQTL+
Sbjct: 182 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLEL 241

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY ++EP
Sbjct: 242 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 282



Score = 42.0 bits (97), Expect = 0.002
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2

Query: 32 NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
NP LM++M++ P +QSL NP+L +++NNP L NP+L + P+ L
Sbjct: 387 NPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 442

Query: 194 RQ-----TLDAARNPELMREMMR 247
+Q TL A NP M+ +++
Sbjct: 443 QQMQNPDTLSAMSNPRAMQALLQ 465


>sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1
SV=1
Length = 596

Score = 131 bits (329), Expect = 3e-30
Identities = 56/101 (55%), Positives = 80/101 (79%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP ++ +M P VQ +M+NP+LMR +IM NPQM+ L++RNPE+ H+LN+P +RQT++
Sbjct: 187 NPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMEL 246

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY ++EP
Sbjct: 247 ARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEP 287


>sp|Q9NRR5|UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1
SV=2
Length = 601

Score = 131 bits (329), Expect = 3e-30
Identities = 56/101 (55%), Positives = 80/101 (79%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP ++ +M P VQ +M+NP+LMR +IM NPQM+ L++RNPE+ H+LN+P +RQT++
Sbjct: 192 NPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMEL 251

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY ++EP
Sbjct: 252 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 292


>sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 PE=1
SV=1
Length = 582

Score = 130 bits (327), Expect = 5e-30
Identities = 58/101 (57%), Positives = 80/101 (79%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP +M +M P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P+ +RQTL+
Sbjct: 173 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPNIMRQTLEL 232

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN +R +SN+E+ P G+N LRRMY ++EP
Sbjct: 233 ARNPAMMQEMMRNQERDLSNLESIPGGYNALRRMYTDIQEP 273



Score = 42.0 bits (97), Expect = 0.002
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2

Query: 32 NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
NP LM++M++ P +QSL NP+L +++NNP L NP+L + P+ L
Sbjct: 381 NPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 436

Query: 194 RQ-----TLDAARNPELMREMMR 247
+Q TL A NP M+ +++
Sbjct: 437 QQMQNPDTLSAMSNPRAMQALLQ 459


>sp|Q9QZM0|UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1
SV=1
Length = 638

Score = 129 bits (325), Expect = 9e-30
Identities = 58/101 (57%), Positives = 79/101 (78%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
+P +M +M P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P +RQTL+
Sbjct: 189 SPEMMIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEI 248

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN D A+SN+E+ P G+N LRRMY ++EP
Sbjct: 249 ARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEP 289



Score = 35.8 bits (81), Expect = 0.18
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2

Query: 32 NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
NP L+++M++ P +QSL NP++ +++++P L NP+L + P+ L
Sbjct: 393 NPQLIQNMLSAPYMRSMMQSLSQNPDMAAQMMLSSP----LFTSNPQLQEQMRPQLPNFL 448

Query: 194 RQ-----TLDAARNPELMREMMR 247
+Q T+ A NP M+ +M+
Sbjct: 449 QQMQNPETIAAMSNPRAMQALMQ 471


>sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1
SV=2
Length = 624

Score = 129 bits (325), Expect = 9e-30
Identities = 58/101 (57%), Positives = 79/101 (78%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
+P +M +M P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P +RQTL+
Sbjct: 178 SPEMMIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEI 237

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNP +M+EMMRN D A+SN+E+ P G+N LRRMY ++EP
Sbjct: 238 ARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEP 278



Score = 40.0 bits (92), Expect = 0.009
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2

Query: 32 NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
NP L+++M++ P +QSL NP+L +++N+P L NP+L + P+ L
Sbjct: 379 NPQLIQNMLSAPYMRSMMQSLSQNPDLAAQMMLNSP----LFTANPQLQEQMRPQLPAFL 434

Query: 194 RQ-----TLDAARNPELMREMMR 247
+Q TL A NP M+ +M+
Sbjct: 435 QQMQNPDTLSAMSNPRAMQALMQ 457


>sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln
PE=1 SV=1
Length = 523

Score = 124 bits (311), Expect = 4e-28
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 9/109 (8%)
Frame = +2

Query: 35 PNLMRDMMNMPAVQ---------SLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPS 187
P + DMMN P +Q SL++NP++ R ++M NP+MR +++ NPE+ +L+DP
Sbjct: 101 PQNINDMMNNPMIQEMFNSRMMDSLLDNPDIFRDMMMGNPEMREVLNNNPEMAQMLSDPR 160

Query: 188 TLRQTLDAARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
LRQ+L+ RNPELMREMMRN DRAM NIE PEGFN+LRRMY ++EP
Sbjct: 161 QLRQSLEMMRNPELMREMMRNADRAMINIENHPEGFNLLRRMYTDIQEP 209



Score = 52.0 bits (123), Expect = 2e-06
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQS----LMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
+P ++ ++N P Q LM++P +M+ +I NPQ+R ++D NP+L +N+P +
Sbjct: 339 DPERVQQLLNNPVAQQMMQRLMSDPAMMQQMITMNPQLRQMMDSNPQLREAMNNP----E 394

Query: 200 TLDAARNPELMREMMR 247
L+ NPE M MM+
Sbjct: 395 FLNMMTNPENMNAMMQ 410


>sp|Q8C5U9|UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2
SV=1
Length = 658

Score = 113 bits (283), Expect = 7e-25
Identities = 48/100 (48%), Positives = 76/100 (76%)
Frame = +2

Query: 35 PNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDAA 214
P L+ +++ P +Q L++N L+R L+++NP M+ LI +NPE+GHILN+P +RQT++
Sbjct: 165 PELVAQLVDDPFIQGLLSNTGLVRQLVLDNPHMQHLIQQNPEIGHILNNPEIMRQTMEFL 224

Query: 215 RNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
RNP +M+EMMR+ DRA+SN+E+ P G+N+LR MY + +P
Sbjct: 225 RNPSMMQEMMRSQDRALSNLESIPGGYNVLRTMYTDIMDP 264


tr_hit_id A9SZR4
Definition tr|A9SZR4|A9SZR4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 101
Score (bit) 188.0
E-value 2.0e-46
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960524|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K11, 5'
(608 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SZR4|A9SZR4_PHYPA Predicted protein OS=Physcomitrella paten... 188 2e-46
tr|A9RYB2|A9RYB2_PHYPA Predicted protein (Fragment) OS=Physcomit... 187 4e-46
tr|A9SEM5|A9SEM5_PHYPA Predicted protein OS=Physcomitrella paten... 185 2e-45
tr|Q9SII8|Q9SII8_ARATH Putative ubiquitin-like protein OS=Arabid... 184 3e-45
tr|Q94C51|Q94C51_ARATH Putative ubiquitin protein OS=Arabidopsis... 184 3e-45
tr|B6TNT9|B6TNT9_MAIZE Ubiquilin-1 OS=Zea mays PE=2 SV=1 184 5e-45
tr|A7R5P6|A7R5P6_VITVI Chromosome undetermined scaffold_1020, wh... 183 6e-45
tr|A5C076|A5C076_VITVI Putative uncharacterized protein OS=Vitis... 183 6e-45
tr|Q9SII9|Q9SII9_ARATH Putative ubiquitin-like protein OS=Arabid... 182 1e-44
tr|Q9FWF5|Q9FWF5_ORYSA Putative ubiquitin protein OS=Oryza sativ... 182 1e-44
tr|Q7XCL2|Q7XCL2_ORYSJ Os10g0542200 protein OS=Oryza sativa subs... 182 1e-44
tr|Q336W1|Q336W1_ORYSJ Ubiquitin family protein, expressed OS=Or... 182 1e-44
tr|Q336W0|Q336W0_ORYSJ Ubiquitin family protein, expressed OS=Or... 182 1e-44
tr|A3C6Z0|A3C6Z0_ORYSJ Putative uncharacterized protein OS=Oryza... 182 1e-44
tr|A2Z9V2|A2Z9V2_ORYSI Putative uncharacterized protein OS=Oryza... 182 1e-44
tr|B6T584|B6T584_MAIZE Ubiquilin-1 OS=Zea mays PE=2 SV=1 181 2e-44
tr|Q10S80|Q10S80_ORYSJ Os03g0131300 protein OS=Oryza sativa subs... 175 2e-42
tr|Q10S79|Q10S79_ORYSJ Ubiquitin family protein, expressed OS=Or... 175 2e-42
tr|Q10S78|Q10S78_ORYSJ Ubiquitin family protein, expressed OS=Or... 175 2e-42
tr|B8AME3|B8AME3_ORYSI Putative uncharacterized protein OS=Oryza... 175 2e-42
tr|A3ADT2|A3ADT2_ORYSJ Putative uncharacterized protein OS=Oryza... 175 2e-42
tr|A7P8P9|A7P8P9_VITVI Chromosome chr3 scaffold_8, whole genome ... 170 5e-41
tr|A7R125|A7R125_VITVI Chromosome undetermined scaffold_334, who... 157 3e-37
tr|A7SUC7|A7SUC7_NEMVE Predicted protein OS=Nematostella vectens... 138 3e-31
tr|B3RS95|B3RS95_TRIAD Putative uncharacterized protein OS=Trich... 135 2e-30
tr|B3KNI2|B3KNI2_HUMAN cDNA FLJ14650 fis, clone NT2RP2002185, hi... 134 4e-30
tr|Q6DCM1|Q6DCM1_XENLA Ubqln2-prov protein OS=Xenopus laevis GN=... 134 5e-30
tr|Q66K07|Q66K07_MOUSE Ubqln1 protein OS=Mus musculus GN=Ubqln1 ... 134 5e-30
tr|Q3TN93|Q3TN93_MOUSE Putative uncharacterized protein OS=Mus m... 134 5e-30
tr|Q3T992|Q3T992_MOUSE Putative uncharacterized protein OS=Mus m... 134 5e-30

>tr|A9SZR4|A9SZR4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_138051 PE=4 SV=1
Length = 545

Score = 188 bits (477), Expect = 2e-46
Identities = 89/101 (88%), Positives = 98/101 (97%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPNLMR+MMNMPAVQ+LMNNP+LMR+LIM+NPQMR +I+RNP+L HILNDP TLRQTLDA
Sbjct: 168 NPNLMREMMNMPAVQNLMNNPDLMRTLIMSNPQMREIIERNPDLAHILNDPGTLRQTLDA 227

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETV+EP
Sbjct: 228 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEP 268



Score = 48.1 bits (113), Expect = 4e-04
Identities = 21/76 (27%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLM----NNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
+P +M+ M+ P +Q +M +NP+ M ++ PQ+R+++++NP+ ++ +P +RQ
Sbjct: 369 DPAMMQQMLQNPQIQQMMQGLLSNPQYMNQMLNLQPQLRNMLNQNPQFRDMMQNPDFIRQ 428

Query: 200 TLDAARNPELMREMMR 247
+PE +++MM+
Sbjct: 429 ----MSSPESLQQMMQ 440


>tr|A9RYB2|A9RYB2_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_21690 PE=4 SV=1
Length = 531

Score = 187 bits (475), Expect = 4e-46
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPNLMR+MMNMP VQ+LMNNP+LMRSLIM+NPQMR +IDRNP+L HILNDP TLRQTLDA
Sbjct: 159 NPNLMREMMNMPVVQNLMNNPDLMRSLIMSNPQMREIIDRNPDLAHILNDPGTLRQTLDA 218

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYE V+EP
Sbjct: 219 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYENVQEP 259



Score = 46.6 bits (109), Expect = 0.001
Identities = 20/76 (26%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLM----NNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
+P +++ M+ P +Q +M +NP M ++ PQ+R+++++NP ++ +P +RQ
Sbjct: 361 DPAMIQQMLQNPQIQEMMQGILSNPAYMNQIMNMQPQLRAMLNQNPHFRDMMQNPDFIRQ 420

Query: 200 TLDAARNPELMREMMR 247
+ NPE ++++M+
Sbjct: 421 MI----NPESLQQLMQ 432


>tr|A9SEM5|A9SEM5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_128512 PE=4 SV=1
Length = 549

Score = 185 bits (470), Expect = 2e-45
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPNLMR+MMN PAVQ+LM+NPELMR LIM+NPQMR +IDRNP+L HILNDP TLRQTLDA
Sbjct: 169 NPNLMREMMNAPAVQNLMSNPELMRLLIMSNPQMREIIDRNPDLAHILNDPGTLRQTLDA 228

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETV+EP
Sbjct: 229 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEP 269



Score = 43.9 bits (102), Expect = 0.007
Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLM----NNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
+P M+ M+ P +Q +M +NP+ M ++ PQ+++ +++NP+ ++ +P +RQ
Sbjct: 371 DPGFMQQMLQNPQMQQMMQGILSNPQYMNQIMNMQPQLQTFLNQNPQFRDMMQNPDFIRQ 430

Query: 200 TLDAARNPELMREMMRNTDRAMSNIEASPEGFNM 301
+PE ++++M+ M G N+
Sbjct: 431 ----MSSPENLQQLMQLQQAMMGQHGRQTPGQNV 460


>tr|Q9SII8|Q9SII8_ARATH Putative ubiquitin-like protein
OS=Arabidopsis thaliana GN=At2g17200 PE=2 SV=1
Length = 551

Score = 184 bits (467), Expect = 3e-45
Identities = 85/101 (84%), Positives = 95/101 (94%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPN++RDMMN PA+Q+LMNNPE MRS+IMNNPQMR L+DRNPELGH+LNDPS LRQTL+A
Sbjct: 167 NPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEA 226

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNPELMREMMRNTDRAMSNIE+ PEGFNMLRRMYE V+EP
Sbjct: 227 ARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEP 267



Score = 53.1 bits (126), Expect = 1e-05
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +2

Query: 44 MRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
+ ++ PA+ QS+ +NP+ M L+ NPQ+RS++D NP+L ++ +P LRQ
Sbjct: 384 LSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRSMLDSNPQLREMMQNPDFLRQ---- 439

Query: 212 ARNPELMREMM 244
+PE+M++MM
Sbjct: 440 FSSPEMMQQMM 450


>tr|Q94C51|Q94C51_ARATH Putative ubiquitin protein OS=Arabidopsis
thaliana GN=At2g17200 PE=2 SV=1
Length = 551

Score = 184 bits (467), Expect = 3e-45
Identities = 85/101 (84%), Positives = 95/101 (94%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPN++RDMMN PA+Q+LMNNPE MRS+IMNNPQMR L+DRNPELGH+LNDPS LRQTL+A
Sbjct: 167 NPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEA 226

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNPELMREMMRNTDRAMSNIE+ PEGFNMLRRMYE V+EP
Sbjct: 227 ARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEP 267



Score = 53.1 bits (126), Expect = 1e-05
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +2

Query: 44 MRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
+ ++ PA+ QS+ +NP+ M L+ NPQ+RS++D NP+L ++ +P LRQ
Sbjct: 384 LSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRSMLDSNPQLREMMQNPDFLRQ---- 439

Query: 212 ARNPELMREMM 244
+PE+M++MM
Sbjct: 440 FSSPEMMQQMM 450


>tr|B6TNT9|B6TNT9_MAIZE Ubiquilin-1 OS=Zea mays PE=2 SV=1
Length = 533

Score = 184 bits (466), Expect = 5e-45
Identities = 85/102 (83%), Positives = 96/102 (94%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPNLMR+MMNMP +Q+LMNNPEL+RS+IMNNPQMR LIDRNP+L H+LNDPS +RQT +A
Sbjct: 154 NPNLMREMMNMPLMQNLMNNPELIRSIIMNNPQMRELIDRNPDLAHVLNDPSIMRQTFEA 213

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
RNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYETV+EPF
Sbjct: 214 VRNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPF 255



Score = 43.9 bits (102), Expect = 0.007
Identities = 23/87 (26%), Positives = 46/87 (52%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP +M+ M N +M+NP+ M L+ NP +R++++ N ++ ++ +P LRQ
Sbjct: 371 NPTMMQMMQN------IMSNPQSMNQLLNMNPNVRNMMESNTQMREMIENPEFLRQ---- 420

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEG 292
+PE +++++ MS + G
Sbjct: 421 LTSPETLQQLISFQQSLMSQLGQQQAG 447


>tr|A7R5P6|A7R5P6_VITVI Chromosome undetermined scaffold_1020, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00005323001 PE=4 SV=1
Length = 460

Score = 183 bits (465), Expect = 6e-45
Identities = 85/102 (83%), Positives = 98/102 (96%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NP++MR++MNMP VQ+LMNNP++M +LIM+NPQMR +IDRNPEL HILNDPSTLRQTL+A
Sbjct: 143 NPSMMREIMNMPVVQNLMNNPDIMHNLIMSNPQMREIIDRNPELAHILNDPSTLRQTLEA 202

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
ARNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYETV+EPF
Sbjct: 203 ARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPF 244



Score = 50.8 bits (120), Expect = 6e-05
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +2

Query: 38 NLMRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTL 205
N + +M PA+ QSL+++P+ M ++ NPQ+RS++D NP+L ++ +P LRQ
Sbjct: 344 NSLNQIMQNPAISQMMQSLLSSPQYMNQILGLNPQLRSVLDSNPQLREMMQNPEFLRQ-- 401

Query: 206 DAARNPELMREMMRNTDRAMSNI 274
+PE M++ + +S +
Sbjct: 402 --LTSPETMQQFLTLQQSLLSQL 422


>tr|A5C076|A5C076_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_002886 PE=4 SV=1
Length = 566

Score = 183 bits (465), Expect = 6e-45
Identities = 86/102 (84%), Positives = 96/102 (94%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPN+MR++MNMPA+Q+LMNNP+LMRSLIMNNPQMR +IDRNPEL HILND LRQTL+A
Sbjct: 184 NPNMMREIMNMPAIQNLMNNPDLMRSLIMNNPQMREIIDRNPELAHILNDTGILRQTLEA 243

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
ARNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYE V+EPF
Sbjct: 244 ARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPF 285



Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Frame = +2

Query: 41 LMRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLD 208
L ++ PAV QSL++NP+ M ++ NPQ+R ++D NP+L I+ +P LRQ
Sbjct: 393 LFNQLLQNPAVSQMMQSLLSNPQYMNQILNFNPQLRGMLDMNPQLREIMQNPELLRQ--- 449

Query: 209 AARNPELMREMMRNTDRAMSNI 274
+PE M++MM +S +
Sbjct: 450 -LTSPETMQQMMSLQQSLLSQL 470


>tr|Q9SII9|Q9SII9_ARATH Putative ubiquitin-like protein
OS=Arabidopsis thaliana GN=At2g17190/T23A1.5 PE=2 SV=2
Length = 538

Score = 182 bits (463), Expect = 1e-44
Identities = 84/101 (83%), Positives = 95/101 (94%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPN++R+MMN PA+Q+LMNNPE MRS+IMNNPQMR L+DRNPELGH+LNDPS LRQTL+A
Sbjct: 162 NPNMIREMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEA 221

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
ARNPELMREMMRNTDRAMSNIE+ PEGFNMLRRMYE V+EP
Sbjct: 222 ARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEP 262



Score = 53.5 bits (127), Expect = 9e-06
Identities = 24/58 (41%), Positives = 41/58 (70%)
Frame = +2

Query: 71 VQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDAARNPELMREMM 244
+QS+++NP+ M L+ NPQ+RS++D NP+L ++ +P LRQ +PE+M++MM
Sbjct: 381 MQSVLSNPQYMNQLMSLNPQLRSMLDMNPQLREMMQNPDFLRQ----FSSPEMMQQMM 434


>tr|Q9FWF5|Q9FWF5_ORYSA Putative ubiquitin protein OS=Oryza sativa
GN=OSJNBb0015I11.23 PE=4 SV=1
Length = 575

Score = 182 bits (463), Expect = 1e-44
Identities = 83/102 (81%), Positives = 98/102 (96%)
Frame = +2

Query: 32 NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
NPNLMR++MNMP +Q+LMNNP+L+R++IMNNPQMR +IDRNP+L H+LNDPS LRQTL+A
Sbjct: 168 NPNLMREIMNMPMMQNLMNNPDLIRNMIMNNPQMRDIIDRNPDLAHVLNDPSVLRQTLEA 227

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
ARNPE+MREMMRNTDRAMSNIE+SPEGFNMLRRMYETV+EPF
Sbjct: 228 ARNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPF 269



Score = 41.2 bits (95), Expect = 0.047
Identities = 19/78 (24%), Positives = 45/78 (57%)
Frame = +2

Query: 41 LMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDAARN 220
++++ + M +Q++M++P+ M L+ NP R+L++ N +L + +P +RQ +
Sbjct: 406 ILQNPVMMQMMQNIMSDPQSMNQLLNFNPNTRNLMESNTQLREMFQNPEFIRQ----LTS 461

Query: 221 PELMREMMRNTDRAMSNI 274
PE M++++ +S +
Sbjct: 462 PETMQQLLSFQQTLLSQL 479