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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960524
Clone id TST39A01NGRL0007_K11
Library
Length 608
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_K11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTTCAACAAGTGCAGCAACAGTTGATGCAGAATCCTAATCTGATGCGGGATATGATGAA
CATGCCGGCCGTTCAAAGCTTGATGAACAATCCTGAACTTATGCGAAGTCTGATAATGAA
CAACCCACAGATGAGGAGTCTCATCGACAGGAATCCAGAACTGGGGCACATTTTAAATGA
TCCTAGCACTCTTCGTCAAACACTCGATGCTGCCCGGAACCCTGAATTAATGAGAGAGAT
GATGAGAAACACAGATCGCGCGATGAGCAACATTGAAGCATCTCCTGAGGGGTTCAACAT
GTTGAGGCGGATGTATGAGACAGTTGAGGAACCTTTTCTGAATGCTGCTACGGGTGCGGA
TGGAGGGAATGATGCGGCTGCCAATCCTTTTGCAGCTTTACTAGGAACGCAAGGGTTGCA
ACCTCAGGCAGGAGTGGCTCCTGCGGGAACAGCTACGGGCGCCACTACGACCACAACAGG
GACAGAGACTGTGGCACCAAACACAGCTCCGCTTCCAAATCCTTGGAATCCCTCTCAGAA
TGCCCCCAATGCGGGAACAGGTGGAGTCGTTGGCCAGACTCCTACAGGGAATTTAGGGGG
CCTATCTG
■■Homology search results ■■ -
sp_hit_id Q5R684
Definition sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii
Align length 101
Score (bit) 134.0
E-value 5.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960524|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K11, 5'
         (608 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2...   134   5e-31
sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1...   134   5e-31
sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1...   134   5e-31
sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1...   131   3e-30
sp|Q9NRR5|UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1...   131   3e-30
sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 P...   130   5e-30
sp|Q9QZM0|UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1...   129   9e-30
sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1...   129   9e-30
sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ub...   124   4e-28
sp|Q8C5U9|UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2...   113   7e-25
sp|Q9H347|UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens GN=UBQLN3 PE=1...   103   5e-22
sp|Q5XIP4|UBQLN_RAT Ubiquilin-like protein OS=Rattus norvegicus ...    52   2e-06
sp|Q14DL0|UBQLN_MOUSE Ubiquilin-like protein OS=Mus musculus GN=...    49   2e-05
sp|Q8IYU4|UBQLN_HUMAN Ubiquilin-like protein OS=Homo sapiens GN=...    47   8e-05
sp|Q5AY89|DDI1_EMENI DNA damage-inducible protein 1 OS=Emericell...    41   0.004
sp|Q0CJ13|DDI1_ASPTN DNA damage-inducible protein 1 OS=Aspergill...    40   0.009
sp|Q0U3Y6|DDI1_PHANO DNA damage-inducible protein 1 OS=Phaeospha...    37   0.079
sp|P48510|DSK2_YEAST Ubiquitin domain-containing protein DSK2 OS...    36   0.13 
sp|A0JPP7|DDI1_RAT Protein DDI1 homolog 1 OS=Rattus norvegicus G...    35   0.39 
sp|Q10169|DSK2_SCHPO Deubiquitination-protection protein dph1 OS...    34   0.51 
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote...    32   1.9  
sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 O...    32   2.5  
sp|Q4G055|RBM40_RAT RNA-binding protein 40 OS=Rattus norvegicus ...    31   4.3  
sp|Q88UT2|RF1_LACPL Peptide chain release factor 1 OS=Lactobacil...    31   5.6  
sp|Q7S906|DDI1_NEUCR DNA damage-inducible protein 1 OS=Neurospor...    31   5.6  
sp|P43823|SYH_HAEIN Histidyl-tRNA synthetase OS=Haemophilus infl...    30   7.4  
sp|Q4QNH3|SYH_HAEI8 Histidyl-tRNA synthetase OS=Haemophilus infl...    30   7.4  
sp|P15377|RTX2A_ACTPL RTX-II toxin determinant A OS=Actinobacill...    30   7.4  
sp|P10576|NTRC_BRASR Nitrogen assimilation regulatory protein OS...    30   7.4  
sp|Q5XJE5|LEO1_MOUSE RNA polymerase-associated protein LEO1 OS=M...    30   7.4  

>sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2
           SV=1
          Length = 589

 Score =  134 bits (336), Expect = 5e-31
 Identities = 60/101 (59%), Positives = 80/101 (79%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP +M  +M  P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P  +RQTL+ 
Sbjct: 182 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLEL 241

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY  ++EP
Sbjct: 242 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 282



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +2

Query: 32  NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
           NP LM++M++ P     +QSL  NP+L   +++NNP    L   NP+L   +    P+ L
Sbjct: 387 NPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 442

Query: 194 RQ-----TLDAARNPELMREMMR 247
           +Q     TL A  NP  M+ +++
Sbjct: 443 QQMQNPDTLSAMSNPRAMQALLQ 465


>sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1
           SV=1
          Length = 582

 Score =  134 bits (336), Expect = 5e-31
 Identities = 60/101 (59%), Positives = 80/101 (79%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP +M  +M  P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P  +RQTL+ 
Sbjct: 173 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLEL 232

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY  ++EP
Sbjct: 233 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 273



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +2

Query: 32  NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
           NP LM++M++ P     +QSL  NP+L   +++NNP    L   NP+L   +    P+ L
Sbjct: 381 NPQLMQNMLSAPYMRSMLQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 436

Query: 194 RQ-----TLDAARNPELMREMMR 247
           +Q     TL A  NP  M+ +++
Sbjct: 437 QQMQNPDTLSAMSNPRAMQALLQ 459


>sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1
           SV=2
          Length = 589

 Score =  134 bits (336), Expect = 5e-31
 Identities = 60/101 (59%), Positives = 80/101 (79%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP +M  +M  P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P  +RQTL+ 
Sbjct: 182 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLEL 241

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY  ++EP
Sbjct: 242 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 282



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +2

Query: 32  NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
           NP LM++M++ P     +QSL  NP+L   +++NNP    L   NP+L   +    P+ L
Sbjct: 387 NPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 442

Query: 194 RQ-----TLDAARNPELMREMMR 247
           +Q     TL A  NP  M+ +++
Sbjct: 443 QQMQNPDTLSAMSNPRAMQALLQ 465


>sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1
           SV=1
          Length = 596

 Score =  131 bits (329), Expect = 3e-30
 Identities = 56/101 (55%), Positives = 80/101 (79%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP ++  +M  P VQ +M+NP+LMR +IM NPQM+ L++RNPE+ H+LN+P  +RQT++ 
Sbjct: 187 NPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMEL 246

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY  ++EP
Sbjct: 247 ARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEP 287


>sp|Q9NRR5|UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1
           SV=2
          Length = 601

 Score =  131 bits (329), Expect = 3e-30
 Identities = 56/101 (55%), Positives = 80/101 (79%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP ++  +M  P VQ +M+NP+LMR +IM NPQM+ L++RNPE+ H+LN+P  +RQT++ 
Sbjct: 192 NPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMEL 251

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN DRA+SN+E+ P G+N LRRMY  ++EP
Sbjct: 252 ARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 292


>sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 PE=1
           SV=1
          Length = 582

 Score =  130 bits (327), Expect = 5e-30
 Identities = 58/101 (57%), Positives = 80/101 (79%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP +M  +M  P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P+ +RQTL+ 
Sbjct: 173 NPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPNIMRQTLEL 232

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN +R +SN+E+ P G+N LRRMY  ++EP
Sbjct: 233 ARNPAMMQEMMRNQERDLSNLESIPGGYNALRRMYTDIQEP 273



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +2

Query: 32  NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
           NP LM++M++ P     +QSL  NP+L   +++NNP    L   NP+L   +    P+ L
Sbjct: 381 NPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNP----LFAGNPQLQEQMRQQLPTFL 436

Query: 194 RQ-----TLDAARNPELMREMMR 247
           +Q     TL A  NP  M+ +++
Sbjct: 437 QQMQNPDTLSAMSNPRAMQALLQ 459


>sp|Q9QZM0|UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1
           SV=1
          Length = 638

 Score =  129 bits (325), Expect = 9e-30
 Identities = 58/101 (57%), Positives = 79/101 (78%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           +P +M  +M  P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P  +RQTL+ 
Sbjct: 189 SPEMMIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEI 248

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN D A+SN+E+ P G+N LRRMY  ++EP
Sbjct: 249 ARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEP 289



 Score = 35.8 bits (81), Expect = 0.18
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +2

Query: 32  NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
           NP L+++M++ P     +QSL  NP++   +++++P    L   NP+L   +    P+ L
Sbjct: 393 NPQLIQNMLSAPYMRSMMQSLSQNPDMAAQMMLSSP----LFTSNPQLQEQMRPQLPNFL 448

Query: 194 RQ-----TLDAARNPELMREMMR 247
           +Q     T+ A  NP  M+ +M+
Sbjct: 449 QQMQNPETIAAMSNPRAMQALMQ 471


>sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1
           SV=2
          Length = 624

 Score =  129 bits (325), Expect = 9e-30
 Identities = 58/101 (57%), Positives = 79/101 (78%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           +P +M  +M  P VQS+++NP+LMR LIM NPQM+ LI RNPE+ H+LN+P  +RQTL+ 
Sbjct: 178 SPEMMIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEI 237

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNP +M+EMMRN D A+SN+E+ P G+N LRRMY  ++EP
Sbjct: 238 ARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEP 278



 Score = 40.0 bits (92), Expect = 0.009
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +2

Query: 32  NPNLMRDMMNMP----AVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILND--PSTL 193
           NP L+++M++ P     +QSL  NP+L   +++N+P    L   NP+L   +    P+ L
Sbjct: 379 NPQLIQNMLSAPYMRSMMQSLSQNPDLAAQMMLNSP----LFTANPQLQEQMRPQLPAFL 434

Query: 194 RQ-----TLDAARNPELMREMMR 247
           +Q     TL A  NP  M+ +M+
Sbjct: 435 QQMQNPDTLSAMSNPRAMQALMQ 457


>sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln
           PE=1 SV=1
          Length = 523

 Score =  124 bits (311), Expect = 4e-28
 Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 9/109 (8%)
 Frame = +2

Query: 35  PNLMRDMMNMPAVQ---------SLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPS 187
           P  + DMMN P +Q         SL++NP++ R ++M NP+MR +++ NPE+  +L+DP 
Sbjct: 101 PQNINDMMNNPMIQEMFNSRMMDSLLDNPDIFRDMMMGNPEMREVLNNNPEMAQMLSDPR 160

Query: 188 TLRQTLDAARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
            LRQ+L+  RNPELMREMMRN DRAM NIE  PEGFN+LRRMY  ++EP
Sbjct: 161 QLRQSLEMMRNPELMREMMRNADRAMINIENHPEGFNLLRRMYTDIQEP 209



 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQS----LMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
           +P  ++ ++N P  Q     LM++P +M+ +I  NPQ+R ++D NP+L   +N+P    +
Sbjct: 339 DPERVQQLLNNPVAQQMMQRLMSDPAMMQQMITMNPQLRQMMDSNPQLREAMNNP----E 394

Query: 200 TLDAARNPELMREMMR 247
            L+   NPE M  MM+
Sbjct: 395 FLNMMTNPENMNAMMQ 410


>sp|Q8C5U9|UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2
           SV=1
          Length = 658

 Score =  113 bits (283), Expect = 7e-25
 Identities = 48/100 (48%), Positives = 76/100 (76%)
 Frame = +2

Query: 35  PNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDAA 214
           P L+  +++ P +Q L++N  L+R L+++NP M+ LI +NPE+GHILN+P  +RQT++  
Sbjct: 165 PELVAQLVDDPFIQGLLSNTGLVRQLVLDNPHMQHLIQQNPEIGHILNNPEIMRQTMEFL 224

Query: 215 RNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           RNP +M+EMMR+ DRA+SN+E+ P G+N+LR MY  + +P
Sbjct: 225 RNPSMMQEMMRSQDRALSNLESIPGGYNVLRTMYTDIMDP 264
tr_hit_id A9SZR4
Definition tr|A9SZR4|A9SZR4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 101
Score (bit) 188.0
E-value 2.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960524|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K11, 5'
         (608 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SZR4|A9SZR4_PHYPA Predicted protein OS=Physcomitrella paten...   188   2e-46
tr|A9RYB2|A9RYB2_PHYPA Predicted protein (Fragment) OS=Physcomit...   187   4e-46
tr|A9SEM5|A9SEM5_PHYPA Predicted protein OS=Physcomitrella paten...   185   2e-45
tr|Q9SII8|Q9SII8_ARATH Putative ubiquitin-like protein OS=Arabid...   184   3e-45
tr|Q94C51|Q94C51_ARATH Putative ubiquitin protein OS=Arabidopsis...   184   3e-45
tr|B6TNT9|B6TNT9_MAIZE Ubiquilin-1 OS=Zea mays PE=2 SV=1              184   5e-45
tr|A7R5P6|A7R5P6_VITVI Chromosome undetermined scaffold_1020, wh...   183   6e-45
tr|A5C076|A5C076_VITVI Putative uncharacterized protein OS=Vitis...   183   6e-45
tr|Q9SII9|Q9SII9_ARATH Putative ubiquitin-like protein OS=Arabid...   182   1e-44
tr|Q9FWF5|Q9FWF5_ORYSA Putative ubiquitin protein OS=Oryza sativ...   182   1e-44
tr|Q7XCL2|Q7XCL2_ORYSJ Os10g0542200 protein OS=Oryza sativa subs...   182   1e-44
tr|Q336W1|Q336W1_ORYSJ Ubiquitin family protein, expressed OS=Or...   182   1e-44
tr|Q336W0|Q336W0_ORYSJ Ubiquitin family protein, expressed OS=Or...   182   1e-44
tr|A3C6Z0|A3C6Z0_ORYSJ Putative uncharacterized protein OS=Oryza...   182   1e-44
tr|A2Z9V2|A2Z9V2_ORYSI Putative uncharacterized protein OS=Oryza...   182   1e-44
tr|B6T584|B6T584_MAIZE Ubiquilin-1 OS=Zea mays PE=2 SV=1              181   2e-44
tr|Q10S80|Q10S80_ORYSJ Os03g0131300 protein OS=Oryza sativa subs...   175   2e-42
tr|Q10S79|Q10S79_ORYSJ Ubiquitin family protein, expressed OS=Or...   175   2e-42
tr|Q10S78|Q10S78_ORYSJ Ubiquitin family protein, expressed OS=Or...   175   2e-42
tr|B8AME3|B8AME3_ORYSI Putative uncharacterized protein OS=Oryza...   175   2e-42
tr|A3ADT2|A3ADT2_ORYSJ Putative uncharacterized protein OS=Oryza...   175   2e-42
tr|A7P8P9|A7P8P9_VITVI Chromosome chr3 scaffold_8, whole genome ...   170   5e-41
tr|A7R125|A7R125_VITVI Chromosome undetermined scaffold_334, who...   157   3e-37
tr|A7SUC7|A7SUC7_NEMVE Predicted protein OS=Nematostella vectens...   138   3e-31
tr|B3RS95|B3RS95_TRIAD Putative uncharacterized protein OS=Trich...   135   2e-30
tr|B3KNI2|B3KNI2_HUMAN cDNA FLJ14650 fis, clone NT2RP2002185, hi...   134   4e-30
tr|Q6DCM1|Q6DCM1_XENLA Ubqln2-prov protein OS=Xenopus laevis GN=...   134   5e-30
tr|Q66K07|Q66K07_MOUSE Ubqln1 protein OS=Mus musculus GN=Ubqln1 ...   134   5e-30
tr|Q3TN93|Q3TN93_MOUSE Putative uncharacterized protein OS=Mus m...   134   5e-30
tr|Q3T992|Q3T992_MOUSE Putative uncharacterized protein OS=Mus m...   134   5e-30

>tr|A9SZR4|A9SZR4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_138051 PE=4 SV=1
          Length = 545

 Score =  188 bits (477), Expect = 2e-46
 Identities = 89/101 (88%), Positives = 98/101 (97%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPNLMR+MMNMPAVQ+LMNNP+LMR+LIM+NPQMR +I+RNP+L HILNDP TLRQTLDA
Sbjct: 168 NPNLMREMMNMPAVQNLMNNPDLMRTLIMSNPQMREIIERNPDLAHILNDPGTLRQTLDA 227

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETV+EP
Sbjct: 228 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEP 268



 Score = 48.1 bits (113), Expect = 4e-04
 Identities = 21/76 (27%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLM----NNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
           +P +M+ M+  P +Q +M    +NP+ M  ++   PQ+R+++++NP+   ++ +P  +RQ
Sbjct: 369 DPAMMQQMLQNPQIQQMMQGLLSNPQYMNQMLNLQPQLRNMLNQNPQFRDMMQNPDFIRQ 428

Query: 200 TLDAARNPELMREMMR 247
                 +PE +++MM+
Sbjct: 429 ----MSSPESLQQMMQ 440


>tr|A9RYB2|A9RYB2_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_21690 PE=4 SV=1
          Length = 531

 Score =  187 bits (475), Expect = 4e-46
 Identities = 89/101 (88%), Positives = 96/101 (95%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPNLMR+MMNMP VQ+LMNNP+LMRSLIM+NPQMR +IDRNP+L HILNDP TLRQTLDA
Sbjct: 159 NPNLMREMMNMPVVQNLMNNPDLMRSLIMSNPQMREIIDRNPDLAHILNDPGTLRQTLDA 218

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYE V+EP
Sbjct: 219 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYENVQEP 259



 Score = 46.6 bits (109), Expect = 0.001
 Identities = 20/76 (26%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLM----NNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
           +P +++ M+  P +Q +M    +NP  M  ++   PQ+R+++++NP    ++ +P  +RQ
Sbjct: 361 DPAMIQQMLQNPQIQEMMQGILSNPAYMNQIMNMQPQLRAMLNQNPHFRDMMQNPDFIRQ 420

Query: 200 TLDAARNPELMREMMR 247
            +    NPE ++++M+
Sbjct: 421 MI----NPESLQQLMQ 432


>tr|A9SEM5|A9SEM5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_128512 PE=4 SV=1
          Length = 549

 Score =  185 bits (470), Expect = 2e-45
 Identities = 89/101 (88%), Positives = 96/101 (95%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPNLMR+MMN PAVQ+LM+NPELMR LIM+NPQMR +IDRNP+L HILNDP TLRQTLDA
Sbjct: 169 NPNLMREMMNAPAVQNLMSNPELMRLLIMSNPQMREIIDRNPDLAHILNDPGTLRQTLDA 228

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETV+EP
Sbjct: 229 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEP 269



 Score = 43.9 bits (102), Expect = 0.007
 Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLM----NNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQ 199
           +P  M+ M+  P +Q +M    +NP+ M  ++   PQ+++ +++NP+   ++ +P  +RQ
Sbjct: 371 DPGFMQQMLQNPQMQQMMQGILSNPQYMNQIMNMQPQLQTFLNQNPQFRDMMQNPDFIRQ 430

Query: 200 TLDAARNPELMREMMRNTDRAMSNIEASPEGFNM 301
                 +PE ++++M+     M        G N+
Sbjct: 431 ----MSSPENLQQLMQLQQAMMGQHGRQTPGQNV 460


>tr|Q9SII8|Q9SII8_ARATH Putative ubiquitin-like protein
           OS=Arabidopsis thaliana GN=At2g17200 PE=2 SV=1
          Length = 551

 Score =  184 bits (467), Expect = 3e-45
 Identities = 85/101 (84%), Positives = 95/101 (94%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPN++RDMMN PA+Q+LMNNPE MRS+IMNNPQMR L+DRNPELGH+LNDPS LRQTL+A
Sbjct: 167 NPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEA 226

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNPELMREMMRNTDRAMSNIE+ PEGFNMLRRMYE V+EP
Sbjct: 227 ARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEP 267



 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = +2

Query: 44  MRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           +  ++  PA+    QS+ +NP+ M  L+  NPQ+RS++D NP+L  ++ +P  LRQ    
Sbjct: 384 LSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRSMLDSNPQLREMMQNPDFLRQ---- 439

Query: 212 ARNPELMREMM 244
             +PE+M++MM
Sbjct: 440 FSSPEMMQQMM 450


>tr|Q94C51|Q94C51_ARATH Putative ubiquitin protein OS=Arabidopsis
           thaliana GN=At2g17200 PE=2 SV=1
          Length = 551

 Score =  184 bits (467), Expect = 3e-45
 Identities = 85/101 (84%), Positives = 95/101 (94%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPN++RDMMN PA+Q+LMNNPE MRS+IMNNPQMR L+DRNPELGH+LNDPS LRQTL+A
Sbjct: 167 NPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEA 226

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNPELMREMMRNTDRAMSNIE+ PEGFNMLRRMYE V+EP
Sbjct: 227 ARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEP 267



 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = +2

Query: 44  MRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           +  ++  PA+    QS+ +NP+ M  L+  NPQ+RS++D NP+L  ++ +P  LRQ    
Sbjct: 384 LSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRSMLDSNPQLREMMQNPDFLRQ---- 439

Query: 212 ARNPELMREMM 244
             +PE+M++MM
Sbjct: 440 FSSPEMMQQMM 450


>tr|B6TNT9|B6TNT9_MAIZE Ubiquilin-1 OS=Zea mays PE=2 SV=1
          Length = 533

 Score =  184 bits (466), Expect = 5e-45
 Identities = 85/102 (83%), Positives = 96/102 (94%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPNLMR+MMNMP +Q+LMNNPEL+RS+IMNNPQMR LIDRNP+L H+LNDPS +RQT +A
Sbjct: 154 NPNLMREMMNMPLMQNLMNNPELIRSIIMNNPQMRELIDRNPDLAHVLNDPSIMRQTFEA 213

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
            RNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYETV+EPF
Sbjct: 214 VRNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPF 255



 Score = 43.9 bits (102), Expect = 0.007
 Identities = 23/87 (26%), Positives = 46/87 (52%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP +M+ M N      +M+NP+ M  L+  NP +R++++ N ++  ++ +P  LRQ    
Sbjct: 371 NPTMMQMMQN------IMSNPQSMNQLLNMNPNVRNMMESNTQMREMIENPEFLRQ---- 420

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEG 292
             +PE +++++      MS +     G
Sbjct: 421 LTSPETLQQLISFQQSLMSQLGQQQAG 447


>tr|A7R5P6|A7R5P6_VITVI Chromosome undetermined scaffold_1020, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00005323001 PE=4 SV=1
          Length = 460

 Score =  183 bits (465), Expect = 6e-45
 Identities = 85/102 (83%), Positives = 98/102 (96%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NP++MR++MNMP VQ+LMNNP++M +LIM+NPQMR +IDRNPEL HILNDPSTLRQTL+A
Sbjct: 143 NPSMMREIMNMPVVQNLMNNPDIMHNLIMSNPQMREIIDRNPELAHILNDPSTLRQTLEA 202

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
           ARNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYETV+EPF
Sbjct: 203 ARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPF 244



 Score = 50.8 bits (120), Expect = 6e-05
 Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = +2

Query: 38  NLMRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTL 205
           N +  +M  PA+    QSL+++P+ M  ++  NPQ+RS++D NP+L  ++ +P  LRQ  
Sbjct: 344 NSLNQIMQNPAISQMMQSLLSSPQYMNQILGLNPQLRSVLDSNPQLREMMQNPEFLRQ-- 401

Query: 206 DAARNPELMREMMRNTDRAMSNI 274
               +PE M++ +      +S +
Sbjct: 402 --LTSPETMQQFLTLQQSLLSQL 422


>tr|A5C076|A5C076_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002886 PE=4 SV=1
          Length = 566

 Score =  183 bits (465), Expect = 6e-45
 Identities = 86/102 (84%), Positives = 96/102 (94%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPN+MR++MNMPA+Q+LMNNP+LMRSLIMNNPQMR +IDRNPEL HILND   LRQTL+A
Sbjct: 184 NPNMMREIMNMPAIQNLMNNPDLMRSLIMNNPQMREIIDRNPELAHILNDTGILRQTLEA 243

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
           ARNPELMREMMRNTDRAMSNIE+SPEGFNMLRRMYE V+EPF
Sbjct: 244 ARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPF 285



 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +2

Query: 41  LMRDMMNMPAV----QSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLD 208
           L   ++  PAV    QSL++NP+ M  ++  NPQ+R ++D NP+L  I+ +P  LRQ   
Sbjct: 393 LFNQLLQNPAVSQMMQSLLSNPQYMNQILNFNPQLRGMLDMNPQLREIMQNPELLRQ--- 449

Query: 209 AARNPELMREMMRNTDRAMSNI 274
              +PE M++MM      +S +
Sbjct: 450 -LTSPETMQQMMSLQQSLLSQL 470


>tr|Q9SII9|Q9SII9_ARATH Putative ubiquitin-like protein
           OS=Arabidopsis thaliana GN=At2g17190/T23A1.5 PE=2 SV=2
          Length = 538

 Score =  182 bits (463), Expect = 1e-44
 Identities = 84/101 (83%), Positives = 95/101 (94%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPN++R+MMN PA+Q+LMNNPE MRS+IMNNPQMR L+DRNPELGH+LNDPS LRQTL+A
Sbjct: 162 NPNMIREMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEA 221

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEP 334
           ARNPELMREMMRNTDRAMSNIE+ PEGFNMLRRMYE V+EP
Sbjct: 222 ARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEP 262



 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 24/58 (41%), Positives = 41/58 (70%)
 Frame = +2

Query: 71  VQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDAARNPELMREMM 244
           +QS+++NP+ M  L+  NPQ+RS++D NP+L  ++ +P  LRQ      +PE+M++MM
Sbjct: 381 MQSVLSNPQYMNQLMSLNPQLRSMLDMNPQLREMMQNPDFLRQ----FSSPEMMQQMM 434


>tr|Q9FWF5|Q9FWF5_ORYSA Putative ubiquitin protein OS=Oryza sativa
           GN=OSJNBb0015I11.23 PE=4 SV=1
          Length = 575

 Score =  182 bits (463), Expect = 1e-44
 Identities = 83/102 (81%), Positives = 98/102 (96%)
 Frame = +2

Query: 32  NPNLMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDA 211
           NPNLMR++MNMP +Q+LMNNP+L+R++IMNNPQMR +IDRNP+L H+LNDPS LRQTL+A
Sbjct: 168 NPNLMREIMNMPMMQNLMNNPDLIRNMIMNNPQMRDIIDRNPDLAHVLNDPSVLRQTLEA 227

Query: 212 ARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVEEPF 337
           ARNPE+MREMMRNTDRAMSNIE+SPEGFNMLRRMYETV+EPF
Sbjct: 228 ARNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPF 269



 Score = 41.2 bits (95), Expect = 0.047
 Identities = 19/78 (24%), Positives = 45/78 (57%)
 Frame = +2

Query: 41  LMRDMMNMPAVQSLMNNPELMRSLIMNNPQMRSLIDRNPELGHILNDPSTLRQTLDAARN 220
           ++++ + M  +Q++M++P+ M  L+  NP  R+L++ N +L  +  +P  +RQ      +
Sbjct: 406 ILQNPVMMQMMQNIMSDPQSMNQLLNFNPNTRNLMESNTQLREMFQNPEFIRQ----LTS 461

Query: 221 PELMREMMRNTDRAMSNI 274
           PE M++++      +S +
Sbjct: 462 PETMQQLLSFQQTLLSQL 479