DK960525 [AcEST]

DK960525
Clone id	TST39A01NGRL0007_K12
Library	TST39
Length	559
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_K12. 5' end sequence.
Accession	DK960525
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	-
Sequence	GCCGTCCTTTGATGTGTAGACAACCACAAATCAACACTCTGGGAGTGTCGATATCCTCAG CACCTACAGTCGTAGGCCGAAAACCCCAAATTTCTAGAGTCGGATCTGCACCCGTCGAGA CTACGTAGTCGAAAATGGCGTGCGCAGACCTTTGTCGAAGCCGAACGGTGGCCGAGATGA CCTCAGAATGAAATTCTGACAACACCAAGCCCTTCGAGCTCTCCCACGAGATTTGGGGCC GTGTCTTCGCCTGTCGAATTTCACTCCAATATGAGCTGGTGACTCTAGTCTCCTGCAGTG CTGCCCCGAGCCTCGATCTGAGCTCTGATACCAGTTGAAGAAGTACGAGCGGAAGTGCGA CCGAGAGAGAGTGCGAGAAGAAGAGCACGACGATATGGTGAACTCGCTCTACTGTAAGGT GTAGAGCATAGTGAGTTCTTATTAGGTTTTAACAGAAGAATATGTGTACATACCTGGCGG CCCGCCCACTTACCTGGGCGACCACATTGGGCTTTTATACCCCAACAGGTGTGCCATCTG GAAGTACACCCTGGACCAT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P13368
Definition	sp\|P13368\|7LESS_DROME Protein sevenless OS=Drosophila melanogaster
Align length	54
Score (bit)	31.2
E-value	3.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960525\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_K12, 5' (559 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P13368\|7LESS_DROME Protein sevenless OS=Drosophila melanogast... 31 3.6 >sp\|P13368\|7LESS_DROME Protein sevenless OS=Drosophila melanogaster GN=sev PE=1 SV=2 Length = 2554 Score = 31.2 bits (69), Expect = 3.6 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = -3 Query: 182 GHLGHRSASTKVCARHFR-LRSLDGCRSDSRNLGFSAYDCRC*GYRHSQSVDLW 24 G +++ TK CA+ +R L+ L+ C+ +L F YD C G D W Sbjct: 245 GEKCYKTRCTKGCAQWYRALKELESCQEACLSLQFYPYDMPCIGACEMAQRDYW 298
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A8M381
Definition	tr\|A8M381\|A8M381_SALAI Peptidase M23B OS=Salinispora arenicola (strain CNS-205)
Align length	81
Score (bit)	33.5
E-value	8.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960525\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_K12, 5' (559 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A8M381\|A8M381_SALAI Peptidase M23B OS=Salinispora arenicola (... 33 8.1 >tr\|A8M381\|A8M381_SALAI Peptidase M23B OS=Salinispora arenicola (strain CNS-205) GN=Sare_2500 PE=4 SV=1 Length = 506 Score = 33.5 bits (75), Expect = 8.1 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = -1 Query: 280 TSSYWSEIRQAKTRPQISWESSKGLVLSEFHSEVISATVRLRQRSAHAIFDYVVSTGADP 101 + ++ + A T +SW G+V +++ V++ AHA +V + G D Sbjct: 194 SGQHYVAVGSAGTLASLSWSPESGVVQADWGGGVLTGRA---MGYAHAGQRHVFARGRDD 250 Query: 100 TLEIWGFRP--TTVGAEDIDT 44 TL W F P + G +D DT Sbjct: 251 TLRHWWFGPGMSVPGLDDWDT 271