DK960526 |
Clone id |
TST39A01NGRL0007_K13 |
Library |
TST39 |
Length |
606 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_K13. 5' end sequence. |
Accession |
DK960526 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL882Contig1 |
Sequence |
CGCTTTGAGAAGAAATGGGTTTTTCTGACAAGGAGCAGGCGGCTACTCAAGACCCGATCG TGTATCCAAAAGTTGAAGGTGGACAGCAGGCTTATGAGACCGGAAGATGGGGCACGTACA CCATGGGAGCCCCATCTAACCCTCAAGATCATCCCCAGAATAAGGAGGCTGCGACATGGG AACCCCTTCCCAGCAACATCTTGGACCAAGGGGAGCAGGTGCGTACACATAACCAACAGG CCAGCCCCAGTTCAAGTGGTTATGCTCACGCTCCTGCCAGTGGAACCGCAAACCCCTACA TCACTACCTCTCCAGCACCAGCATTTACTGGAAAAAGCCCAATGGATATTATACAGGACT ATTTGAATAAGTGGAGACAAAAGTTTGAGGAGGTTTCAAAGAAAGCAGAGGAGGCGGCTG GAAATGTGTGGCAACATTGGAAGACTGGTCCAAACATGGCGGACACAGCTTGGGGAAGGT TGAGCCAAGGTACACGATTGCTTACAGAAGGTGGTTTTGACAAGATTTTTAGACAGACTT TTGAGACTTCGCCCGATGAGCAGTTGCGGAAGTCATATGCCTGCTATTTATCCACATCCC CTGGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SE96 |
Definition |
sp|Q9SE96|GEML1_ARATH GEM-like protein 1 OS=Arabidopsis thaliana |
Align length |
175 |
Score (bit) |
132.0 |
E-value |
1.0e-30 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NXA4 |
Definition |
tr|A9NXA4|A9NXA4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
173 |
Score (bit) |
170.0 |
E-value |
5.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960526|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_K13, 5' (606 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NXA4|A9NXA4_PICSI Putative uncharacterized protein OS=Picea... 170 5e-41 tr|A7LH72|A7LH72_VITVI GEM-like 1 OS=Vitis vinifera PE=2 SV=1 153 7e-36 tr|A5BZD6|A5BZD6_VITVI Putative uncharacterized protein OS=Vitis... 151 3e-35 tr|B7FL58|B7FL58_MEDTR Putative uncharacterized protein OS=Medic... 147 5e-34 tr|A7NUQ7|A7NUQ7_VITVI Chromosome chr18 scaffold_1, whole genome... 146 8e-34 tr|B8LPM4|B8LPM4_PICSI Putative uncharacterized protein OS=Picea... 143 7e-33 tr|A7R0I5|A7R0I5_VITVI Chromosome undetermined scaffold_309, who... 130 5e-29 tr|B6U8P6|B6U8P6_MAIZE ABA-responsive protein OS=Zea mays PE=2 SV=1 129 1e-28 tr|Q9ZTW0|Q9ZTW0_HORVU ABA-responsive protein OS=Hordeum vulgare... 125 2e-27 tr|B7ZY29|B7ZY29_MAIZE Putative uncharacterized protein OS=Zea m... 123 9e-27 tr|B6SJ51|B6SJ51_MAIZE FIP1 OS=Zea mays PE=2 SV=1 123 9e-27 tr|B6TYS0|B6TYS0_MAIZE FIP1 OS=Zea mays PE=2 SV=1 122 1e-26 tr|Q8H7P4|Q8H7P4_ORYSJ Os03g0187600 protein OS=Oryza sativa subs... 122 2e-26 tr|Q10QQ4|Q10QQ4_ORYSJ FH protein interacting protein FIP1, puta... 122 2e-26 tr|A3AEX8|A3AEX8_ORYSJ Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|A2XDC7|A2XDC7_ORYSI Putative uncharacterized protein OS=Oryza... 121 3e-26 tr|Q2QQY9|Q2QQY9_ORYSJ ABA-responsive protein, putative, express... 120 5e-26 tr|B6TRZ9|B6TRZ9_MAIZE FIP1 OS=Zea mays PE=2 SV=1 120 5e-26 tr|B4FF76|B4FF76_MAIZE Putative uncharacterized protein OS=Zea m... 120 5e-26 tr|A2ZKG0|A2ZKG0_ORYSI Putative uncharacterized protein OS=Oryza... 120 5e-26 tr|Q69QB4|Q69QB4_ORYSJ Putative ABA-responsive protein OS=Oryza ... 120 6e-26 tr|B8B404|B8B404_ORYSI Putative uncharacterized protein OS=Oryza... 120 6e-26 tr|B6TPG9|B6TPG9_MAIZE FIP1 OS=Zea mays PE=2 SV=1 120 8e-26 tr|B6SNS7|B6SNS7_MAIZE FIP1 OS=Zea mays PE=2 SV=1 120 8e-26 tr|B4FJD7|B4FJD7_MAIZE Putative uncharacterized protein OS=Zea m... 120 8e-26 tr|A9RJF4|A9RJF4_PHYPA Predicted protein (Fragment) OS=Physcomit... 120 8e-26 tr|B6U0T2|B6U0T2_MAIZE Putative uncharacterized protein OS=Zea m... 119 1e-25 tr|B6TUE5|B6TUE5_MAIZE FIP1 OS=Zea mays PE=2 SV=1 116 1e-24 tr|B8AR44|B8AR44_ORYSI Putative uncharacterized protein OS=Oryza... 114 4e-24 tr|Q84R37|Q84R37_ORYSJ Os03g0736700 protein OS=Oryza sativa subs... 114 6e-24
>tr|A9NXA4|A9NXA4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 292
Score = 170 bits (431), Expect = 5e-41 Identities = 84/173 (48%), Positives = 114/173 (65%), Gaps = 5/173 (2%) Frame = +3
Query: 102 GRWGTYTMGAPSNPQDHPQNKEAATW---EPLPSNILDQGEQVRTHNQQASPSSSGYA-- 266 G GT+ MG P++P HP N++AATW + +PSN + H+ P+ +G Sbjct: 21 GTMGTWVMGIPADPSSHPVNQQAATWVAGKAMPSNTTTTTQHYAQHSGPP-PAVTGTITY 79
Query: 267 HAPASGTANPYITTSPAPAFTGKSPMDIIQDYLNKWRQKFEEVSKKAEEAAGNVWQHWKT 446 H +NPY+ T+PA TGK PMD+I D NK +K EE ++K E AGNVWQH K Sbjct: 80 HQNMPSPSNPYVATTPATGSTGKRPMDMIADVFNKCSKKLEENTRKVEGFAGNVWQHLKI 139
Query: 447 GPNMADTAWGRLSQGTRLLTEGGFDKIFRQTFETSPDEQLRKSYACYLSTSPG 605 GP+ DTA GR++QGT+LLTEGG++ +FR+TFET P E+L+K++ACYLSTS G Sbjct: 140 GPSFTDTAMGRIAQGTKLLTEGGYENVFRRTFETIPGEKLQKAHACYLSTSAG 192
>tr|A7LH72|A7LH72_VITVI GEM-like 1 OS=Vitis vinifera PE=2 SV=1 Length = 284
Score = 153 bits (387), Expect = 7e-36 Identities = 81/193 (41%), Positives = 118/193 (61%) Frame = +3
Query: 27 DKEQAATQDPIVYPKVEGGQQAYETGRWGTYTMGAPSNPQDHPQNKEAATWEPLPSNILD 206 + + + D YPK++ A W T T+ S+ HP ++ + + P+ + + Sbjct: 15 ESDYPPSADYAPYPKLDPNDVAPPKEDWTTVTI---SSQTPHPVSQNSGS--PISESASE 69
Query: 207 QGEQVRTHNQQASPSSSGYAHAPASGTANPYITTSPAPAFTGKSPMDIIQDYLNKWRQKF 386 + ++ P S NPYI++SPAPA + K+ MD ++D L KW +K Sbjct: 70 GPAPIARNSATTMPVES-----------NPYISSSPAPASSMKNKMDSVKDVLGKWGKKA 118
Query: 387 EEVSKKAEEAAGNVWQHWKTGPNMADTAWGRLSQGTRLLTEGGFDKIFRQTFETSPDEQL 566 E +KKAE+ AGN+WQH KTGP+ AD A GR++QGT++L EGG++KIF+QTFET P+EQL Sbjct: 119 AEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQL 178
Query: 567 RKSYACYLSTSPG 605 +KSYACYLSTS G Sbjct: 179 QKSYACYLSTSAG 191
>tr|A5BZD6|A5BZD6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035993 PE=4 SV=1 Length = 264
Score = 151 bits (381), Expect = 3e-35 Identities = 80/193 (41%), Positives = 117/193 (60%) Frame = +3
Query: 27 DKEQAATQDPIVYPKVEGGQQAYETGRWGTYTMGAPSNPQDHPQNKEAATWEPLPSNILD 206 + + + D YPK++ A W T T+ S+ HP ++ + + P+ + + Sbjct: 40 ESDYPPSADYAPYPKLDPNDVAPPKEDWTTVTI---SSQTPHPVSQNSGS--PISESASE 94
Query: 207 QGEQVRTHNQQASPSSSGYAHAPASGTANPYITTSPAPAFTGKSPMDIIQDYLNKWRQKF 386 + ++ P S NPYI++SPAPA + K+ MD ++D L KW +K Sbjct: 95 GPAPIARNSATTMPVES-----------NPYISSSPAPASSMKNKMDSVKDVLGKWGKKA 143
Query: 387 EEVSKKAEEAAGNVWQHWKTGPNMADTAWGRLSQGTRLLTEGGFDKIFRQTFETSPDEQL 566 E +KKAE+ AGN+WQH K GP+ AD A GR++QGT++L EGG++KIF+QTFET P+EQL Sbjct: 144 AEATKKAEDLAGNMWQHLKXGPSFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQL 203
Query: 567 RKSYACYLSTSPG 605 +KSYACYLSTS G Sbjct: 204 QKSYACYLSTSAG 216
>tr|B7FL58|B7FL58_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 258
Score = 147 bits (371), Expect = 5e-34 Identities = 74/159 (46%), Positives = 103/159 (64%), Gaps = 1/159 (0%) Frame = +3
Query: 132 PSNPQDHPQNKEAATWEPLPSNILDQGEQVRTHNQQASPSSSGYAHAPASGTANPYITTS 311 P+NP+ + + T + P LD + A+ S + A +NPY++ + Sbjct: 8 PTNPKPQDSDSHSHTPDYAPYPKLDPNDVAPPPPPVATESRATDAATTMPAESNPYVSPA 67
Query: 312 PAPAFTG-KSPMDIIQDYLNKWRQKFEEVSKKAEEAAGNVWQHWKTGPNMADTAWGRLSQ 488 P PA T K+ +D ++D L KW +K E +KKAE+ AGN+WQH KTGP+ AD A GR++Q Sbjct: 68 PVPAPTSAKNTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQ 127
Query: 489 GTRLLTEGGFDKIFRQTFETSPDEQLRKSYACYLSTSPG 605 GT++L EGG++KIFRQTFET P+EQL K+YACYLSTS G Sbjct: 128 GTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAG 166
>tr|A7NUQ7|A7NUQ7_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015142001 PE=4 SV=1 Length = 263
Score = 146 bits (369), Expect = 8e-34 Identities = 73/154 (47%), Positives = 104/154 (67%), Gaps = 1/154 (0%) Frame = +3
Query: 147 DHPQNKEAATWEPL-PSNILDQGEQVRTHNQQASPSSSGYAHAPASGTANPYITTSPAPA 323 D+P + + A + L P+++ E T + + + +NPYI++SPAPA Sbjct: 17 DYPPSADYAPYPKLDPNDVAPPKEDWTTVTIKGPAPIARNSATTMPVESNPYISSSPAPA 76
Query: 324 FTGKSPMDIIQDYLNKWRQKFEEVSKKAEEAAGNVWQHWKTGPNMADTAWGRLSQGTRLL 503 + K+ MD ++D L KW +K E +KKAE+ AGN+WQH K GP+ AD A GR++QGT++L Sbjct: 77 SSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGPSFADAAVGRIAQGTKVL 136
Query: 504 TEGGFDKIFRQTFETSPDEQLRKSYACYLSTSPG 605 EGG++KIF+QTFET P+EQL+KSYACYLSTS G Sbjct: 137 AEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAG 170
>tr|B8LPM4|B8LPM4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 295
Score = 143 bits (361), Expect = 7e-33 Identities = 83/210 (39%), Positives = 111/210 (52%), Gaps = 15/210 (7%) Frame = +3
Query: 21 FSDKE--QAATQDPIVYPKVEG-------------GQQAYETGRWGTYTMGAPSNPQDHP 155 ++DK A PIVYPK+ G ++ +WGT MGAP++P HP Sbjct: 16 YTDKSGRTAGETQPIVYPKLNGEGSTTPKALDRDSANSQKDSRKWGTKVMGAPASPSAHP 75
Query: 156 QNKEAATWEPLPSNILDQGEQVRTHNQQASPSSSGYAHAPASGTANPYITTSPAPAFTGK 335 QN+EAATW + P+ S Y P SP + K Sbjct: 76 QNQEAATWTA----------------PEEHPTPSSYIVQP-----------SPVDS---K 105
Query: 336 SPMDIIQDYLNKWRQKFEEVSKKAEEAAGNVWQHWKTGPNMADTAWGRLSQGTRLLTEGG 515 SP++++Q NKW +KKAE A VW + KTG +M+D AWG+L+ G + LTEGG Sbjct: 106 SPINLVQHCFNKW-------TKKAENLASEVWTNLKTGNSMSDAAWGKLTLGAKALTEGG 158
Query: 516 FDKIFRQTFETSPDEQLRKSYACYLSTSPG 605 F+ +FRQTF SPDE+L+K+YACYLSTS G Sbjct: 159 FEALFRQTFSVSPDEKLKKTYACYLSTSTG 188
>tr|A7R0I5|A7R0I5_VITVI Chromosome undetermined scaffold_309, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011458001 PE=4 SV=1 Length = 289
Score = 130 bits (328), Expect = 5e-29 Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 4/114 (3%) Frame = +3
Query: 276 ASGTANPYI----TTSPAPAFTGKSPMDIIQDYLNKWRQKFEEVSKKAEEAAGNVWQHWK 443 +S +NPY+ S +P F K+ M+ ++D L +W +K E SKKAE+ AGN WQH K Sbjct: 79 SSDGSNPYVDRSSVASNSPQFNFKNTMNSVRDVLGRWGRKVGEASKKAEDLAGNTWQHLK 138
Query: 444 TGPNMADTAWGRLSQGTRLLTEGGFDKIFRQTFETSPDEQLRKSYACYLSTSPG 605 T P+ AD A GR++QGT++L EGG++KIFR TFET P+EQL+ S+ACYLSTS G Sbjct: 139 TSPSFADAAMGRIAQGTKVLAEGGYEKIFRHTFETVPEEQLQNSFACYLSTSAG 192
>tr|B6U8P6|B6U8P6_MAIZE ABA-responsive protein OS=Zea mays PE=2 SV=1 Length = 272
Score = 129 bits (325), Expect = 1e-28 Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 2/172 (1%) Frame = +3
Query: 96 ETGRWGTYTMGAPSNPQDHPQNKEAATWEPLPSNILDQGEQVRTHNQQASPSSSGYAHAP 275 ET RWGT MG P+ P HP+N+EAA W ++ G P Sbjct: 29 ETARWGTRQMGPPAAPGAHPENQEAARWT----------------------AARGDQELP 66
Query: 276 ASGTANPYITTSPAPAFTGK--SPMDIIQDYLNKWRQKFEEVSKKAEEAAGNVWQHWKTG 449 + P P GK SPM+ I D+ N W S+KAEE A N+W + K Sbjct: 67 PYVIIGEPVAAPPPPQHRGKGDSPMEHILDFFNTW-------SRKAEELASNIWFNLKAA 119
Query: 450 PNMADTAWGRLSQGTRLLTEGGFDKIFRQTFETSPDEQLRKSYACYLSTSPG 605 P+M+D A G+LS G + L+EGGF+K+++QTF +SPDE L+K++ACYLST+ G Sbjct: 120 PSMSDAAMGKLSLGAKALSEGGFEKLYKQTFSSSPDEHLKKTFACYLSTATG 171
>tr|Q9ZTW0|Q9ZTW0_HORVU ABA-responsive protein OS=Hordeum vulgare PE=2 SV=1 Length = 326
Score = 125 bits (313), Expect = 2e-27 Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 15/203 (7%) Frame = +3
Query: 42 ATQDPIVYPKVEGGQQA----YETGRWGTYTMGAPSNPQDHPQNKEAATWEPLPSNILDQ 209 AT P+ V+G A E+ RWGT MG P+ P HP+N++AA W Sbjct: 89 ATPSPLTQQAVDGKDAAPTPPAESARWGTRQMGPPAAPGAHPENQQAAQW---------- 138
Query: 210 GEQVRTHNQQASPSSSGYAHAPASGTANPYI---TTSPAPAFTGK--------SPMDIIQ 356 T Q P PY+ PAPA + + SPM+ I Sbjct: 139 ---TATRGDQELP---------------PYVIMGAPEPAPAASARRTDKEARDSPMEHIL 180
Query: 357 DYLNKWRQKFEEVSKKAEEAAGNVWQHWKTGPNMADTAWGRLSQGTRLLTEGGFDKIFRQ 536 D+ N W S+KAEE + N+W + KT P+M+D A G+LS G + +T GGF+K+++Q Sbjct: 181 DFFNTW-------SRKAEELSSNIWLNLKTAPSMSDAAMGKLSLGAKAITGGGFEKLYKQ 233
Query: 537 TFETSPDEQLRKSYACYLSTSPG 605 TF + PDE ++K++ACYLST+ G Sbjct: 234 TFGSGPDEHVKKTFACYLSTATG 256
>tr|B7ZY29|B7ZY29_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 242
Score = 123 bits (308), Expect = 9e-27 Identities = 57/111 (51%), Positives = 82/111 (73%) Frame = +3
Query: 273 PASGTANPYITTSPAPAFTGKSPMDIIQDYLNKWRQKFEEVSKKAEEAAGNVWQHWKTGP 452 P SG ANPY+ ++P+P KS + +++ +KF E ++K E AG+VWQH KTGP Sbjct: 37 PPSG-ANPYVLSAPSPNPPAKSARENLREMFGMVGKKFNEAARKTEGIAGDVWQHLKTGP 95
Query: 453 NMADTAWGRLSQGTRLLTEGGFDKIFRQTFETSPDEQLRKSYACYLSTSPG 605 ++ DTA GR++Q +++++EGG+DKIF+QTFE SPDE+L K+Y CYLSTS G Sbjct: 96 SITDTAMGRIAQISKVISEGGYDKIFQQTFECSPDEKLNKAYVCYLSTSHG 146
|