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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960528
Clone id TST39A01NGRL0007_K15
Library
Length 627
Definition Adiantum capillus-veneris CRY2 mRNA for blue-light photoreceptor, partial cds
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GACTCGAGGAGGGGCTGGGTGATACAGTAGAAGTGCAAGGGATGCGAAATGGGTTTCCTG
CCAACATGGATATTGACAGAGGGCCAGGGGAAAAAGCCTTGTTAGTGAGGTCACCGCATG
ATCAAATGGTACCTAATGTTGGTGTAAGGAGGTCAACAACAGGAGCGGTTCAAGGGGGCG
CAGCCGAACAAGGGAGTGCATTGCAAGCTGTTCTAAGGGAAGTGCCTGCTAATGGGCATG
TTCAGGCGGTGCAGGCACAATCTCAAAGGATGGCTGCACCACCTATGGCTATGCAGAACG
AATACGATGACACTCATTCTACCGCTGAATCGACCTCTGCAAGGCATTGGTCTCTAGCTA
TCGGTCTACCAGTCTGGTCGCAGTACGTCCCTGTGTGTCTGCACATGCGGCAAGACGATT
CTCAAGTGCCTTTGGTACCAGATCTGCATCATGGTGTCATGTCTAGAAGACTTCCTCATG
CGCCGCCCATGGTGAATTTTGAAGCAACTAAGACAAGTTCACTCTCAGTTTGAAGCAAGT
ATGTGCAATTTGCATGGAGACTATTCACCTGGTTCAGCTTGAGGAACGGTGCTGGCAACA
TCAGGAGAGTTGTGTGAATGTGCAAAT
■■Homology search results ■■ -
sp_hit_id Q43125
Definition sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana
Align length 142
Score (bit) 35.4
E-value 0.23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960528|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K15, 5'
         (613 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana GN=C...    35   0.23 
sp|Q80U23|SNPH_MOUSE Syntaphilin OS=Mus musculus GN=Snph PE=1 SV=2     33   0.88 
sp|A2SQM6|TFE_METLZ Transcription factor E OS=Methanocorpusculum...    33   1.5  
sp|Q5KGG4|VPS27_CRYNE Vacuolar protein sorting-associated protei...    32   2.6  
sp|P04011|VP2_POVLY Minor capsid protein VP2 OS=B-lymphotropic p...    32   3.3  
sp|Q983L2|MUTL_RHILO DNA mismatch repair protein mutL OS=Rhizobi...    32   3.3  
sp|O35245|PKD2_MOUSE Polycystin-2 OS=Mus musculus GN=Pkd2 PE=2 SV=1    31   4.4  
sp|Q9VPB1|ST7_DROME Protein ST7 homolog OS=Drosophila melanogast...    30   7.5  
sp|A1Z9E2|LIN54_DROME Protein lin-54 homolog OS=Drosophila melan...    30   9.7  

>sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1
           PE=1 SV=1
          Length = 681

 Score = 35.4 bits (80), Expect = 0.23
 Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
 Frame = +3

Query: 6   EEGLGDTVEVQGMRNGFPANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAA 185
           EEGLGD+ EV+     FP ++ ++     +    R   DQMVP++     T+  ++    
Sbjct: 507 EEGLGDSAEVEEAPIEFPRDITMEETEPTRLNPNRRYEDQMVPSI-----TSSLIRPEED 561

Query: 186 EQGS-----ALQAVLREVPANGHVQAVQAQSQRMAAPP----MAMQNEYD-------DTH 317
           E+ S     ++     EVP N  V   QAQ QR A P      AM  E++          
Sbjct: 562 EESSLNLRNSVGDSRAEVPRN-MVNTNQAQ-QRRAEPASNQVTAMIPEFNIRIVAESTED 619

Query: 318 STAESTSARHWSLAIGL-PVWS 380
           STAES+S+     + G+ P WS
Sbjct: 620 STAESSSSGRRERSGGIVPEWS 641


>sp|Q80U23|SNPH_MOUSE Syntaphilin OS=Mus musculus GN=Snph PE=1 SV=2
          Length = 528

 Score = 33.5 bits (75), Expect = 0.88
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +3

Query: 141 GVRRSTTGAVQGGA-AEQGSALQAVLREVPANGHVQAVQAQSQRMAAPPMAMQNEYDDTH 317
           G RR++ G+  GG     G A+ A   +VPA+ + Q     + R  +PP+++++ Y  + 
Sbjct: 7   GSRRASAGSRSGGTLGRSGLAVFAQCPQVPASQNEQRPLLPASRRTSPPVSVRDAYGTSS 66

Query: 318 STAESTS 338
            ++ S S
Sbjct: 67  LSSSSNS 73


>sp|A2SQM6|TFE_METLZ Transcription factor E OS=Methanocorpusculum
           labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tfe PE=3
           SV=1
          Length = 211

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 241 FRRCRHNLKGWLHHLWLCRTNTMTLIL 321
           +RR ++N  GWL +LWL R + M ++L
Sbjct: 107 YRRIKNNETGWLTYLWLMRMDHMNMVL 133


>sp|Q5KGG4|VPS27_CRYNE Vacuolar protein sorting-associated protein
           27 OS=Cryptococcus neoformans GN=VPS27 PE=3 SV=1
          Length = 750

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 25/98 (25%), Positives = 35/98 (35%)
 Frame = +3

Query: 225 PANGHVQAVQAQSQRMAAPPMAMQNEYDDTHSTAESTSARHWSLAIGLPVWSQYVPVCLH 404
           PA  HVQ   A+   +  PP++         S   +   R  S+  G P+     PV   
Sbjct: 520 PAPSHVQPGLARQASVVVPPVS---------SPVPAGVQRQASMTYGAPI-----PVAEQ 565

Query: 405 MRQDDSQVPLVPDLHHGVMSRRLPHAPPMVNFEATKTS 518
            ++   Q    P    G     +P APP VN      S
Sbjct: 566 SQRQQQQYASAPPFASGAAPVDIPSAPPPVNLSTHPNS 603


>sp|P04011|VP2_POVLY Minor capsid protein VP2 OS=B-lymphotropic
           polyomavirus PE=3 SV=3
          Length = 356

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 6/129 (4%)
 Frame = +3

Query: 81  GPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQ 260
           G   +A+ VRS ++       +  +   A+  G     S++Q   R +PA   +Q  Q  
Sbjct: 174 GQATRAVAVRSTNELSHTLAQIAENARWALTSGPVHIYSSVQDYYRYLPARNPIQLRQEY 233

Query: 261 SQRMAAPPMAMQNEYDDTHSTAESTSARHWSLAIGLPVWSQYV-----PVCLHMR-QDDS 422
             R   PP     EY +     E   AR   L    P   QYV     P   H R   D 
Sbjct: 234 RNRGEPPPSRADFEYQENR---EGQRARR-ELGYDEPRSGQYVEHYTAPGGAHQRVTQDW 289

Query: 423 QVPLVPDLH 449
            +PL+  L+
Sbjct: 290 MLPLILGLY 298


>sp|Q983L2|MUTL_RHILO DNA mismatch repair protein mutL OS=Rhizobium
           loti GN=mutL PE=3 SV=1
          Length = 627

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
 Frame = +3

Query: 48  NGFPANMDID-RGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLREV 224
           N  PA  D+  R PG    L+     Q + + G+R +TTGA    AA +  A  +     
Sbjct: 299 NVHPAKADVRFRDPGLVRGLIVGAIRQALADAGIRSATTGAAGMMAAFRPGA-ASYNHGG 357

Query: 225 PANGH---VQAVQAQSQRMAAPPMAMQNEYDDTHSTAESTSARH 347
           PANGH     A +A       P  + Q   D      E   ARH
Sbjct: 358 PANGHRSYEAAYRASGSAGFDPARSPQRPLDMQFGDFERAGARH 401


>sp|O35245|PKD2_MOUSE Polycystin-2 OS=Mus musculus GN=Pkd2 PE=2 SV=1
          Length = 966

 Score = 31.2 bits (69), Expect = 4.4
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 21  DTVEVQGMRNGFPANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQG 194
           D  EV+G   G    MD++  PG +    RS     V +VG R    G+ +G A   G
Sbjct: 97  DDDEVEGEEGGMVVEMDVEWRPGSR----RSASSSAVSSVGARGRGLGSYRGAAHLSG 150


>sp|Q9VPB1|ST7_DROME Protein ST7 homolog OS=Drosophila melanogaster
           GN=CG3634 PE=2 SV=1
          Length = 537

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 21/89 (23%), Positives = 37/89 (41%)
 Frame = +3

Query: 99  LLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQSQRMAA 278
           L  R+  D+  P++  +R  + A       + SA++A+ R V  N HV     +++R+  
Sbjct: 336 LKARAVADKFSPDIASKRGLSQA-------EMSAVEAIHRAVEFNPHVPKYLLETKRLIL 388

Query: 279 PPMAMQNEYDDTHSTAESTSARHWSLAIG 365
           PP  +    D           +HW    G
Sbjct: 389 PPEHILKRGDSEALAYAFFHLKHWKQVEG 417


>sp|A1Z9E2|LIN54_DROME Protein lin-54 homolog OS=Drosophila
           melanogaster GN=mip120 PE=1 SV=1
          Length = 950

 Score = 30.0 bits (66), Expect = 9.7
 Identities = 27/108 (25%), Positives = 43/108 (39%)
 Frame = +3

Query: 57  PANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLREVPANG 236
           P  M +  G G++ L+      ++ PN     STT    G      S L A+  ++P  G
Sbjct: 341 PGKMLVQSG-GKQILVSNKNIIKLSPNASATSSTTHTTGGQTPSTSSGLHAI--QLPGKG 397

Query: 237 HVQAVQAQSQRMAAPPMAMQNEYDDTHSTAESTSARHWSLAIGLPVWS 380
            +Q V+  +   +A   +       T  T + T  R    A G+P  S
Sbjct: 398 GIQYVRVLNNNKSAAGTSATASIPKTVQTQKITVVRP-PAATGVPATS 444
tr_hit_id O82769
Definition tr|O82769|O82769_ADICA Blue-light photoreceptor OS=Adiantum capillus-veneris
Align length 176
Score (bit) 353.0
E-value 6.0e-96
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960528|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K15, 5'
         (613 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O82769|O82769_ADICA Blue-light photoreceptor OS=Adiantum capi...   353   6e-96
tr|Q2V2M0|Q2V2M0_MARPA Cryptochrome OS=Marchantia paleacea var. ...    49   2e-04
tr|O82786|O82786_ADICA Blue-light photoreceptor OS=Adiantum capi...    41   0.048
tr|Q9SXG9|Q9SXG9_PHYPA Blue light photoreceptor cryptochrome OS=...    38   0.40 
tr|Q948Q6|Q948Q6_PHYPA Blue-light receptor cryptochrome OS=Physc...    38   0.40 
tr|A9RD25|A9RD25_PHYPA AtCRY1/HY4-like cryptochrome blue light p...    38   0.40 
tr|A9RD20|A9RD20_PHYPA Cryptochrome 1a OS=Physcomitrella patens ...    38   0.40 
tr|Q1JU52|Q1JU52_BRANA Cryptochrome1 OS=Brassica napus GN=cry1 P...    37   0.90 
tr|Q0GKU4|Q0GKU4_BRACM Cryptochrome 1 protein OS=Brassica campes...    37   0.90 
tr|Q1AW01|Q1AW01_RUBXD Type IV pilus assembly protein PilM OS=Ru...    35   2.6  
tr|B1W5U4|B1W5U4_STRGG Putative dihydrodipicolinate synthase OS=...    35   2.6  
tr|Q8PG64|Q8PG64_XANAC Putative uncharacterized protein XAC3753 ...    35   4.5  
tr|A6NQY8|A6NQY8_9BACE Putative uncharacterized protein OS=Bacte...    35   4.5  
tr|Q8H6B3|Q8H6B3_SORBI Cryptochrome 2 apoprotein OS=Sorghum bico...    34   5.8  
tr|Q5MD22|Q5MD22_SORBI Cryptochrome 2 OS=Sorghum bicolor PE=4 SV=1     34   5.8  
tr|A8I4B9|A8I4B9_CHLRE Predicted protein (Fragment) OS=Chlamydom...    34   5.8  
tr|Q2UFX9|Q2UFX9_ASPOR Predicted protein OS=Aspergillus oryzae G...    34   5.8  
tr|B8NHX4|B8NHX4_ASPFL AflYe/ orf/ Ser-Thr protein phosphatase f...    34   5.8  
tr|A4SI32|A4SI32_AERS4 Lateral flagellar hook-associated protein...    34   7.6  
tr|Q2LK99|Q2LK99_AERHY FlgLL OS=Aeromonas hydrophila GN=flgLL PE...    34   7.6  
tr|A8PGT9|A8PGT9_COPC7 Predicted protein OS=Coprinopsis cinerea ...    34   7.6  
tr|B3PHU0|B3PHU0_CELJU Putative uncharacterized protein OS=Cellv...    33   10.0 
tr|B0TEK6|B0TEK6_HELMI Methyl-accepting chemotaxis protein OS=He...    33   10.0 

>tr|O82769|O82769_ADICA Blue-light photoreceptor OS=Adiantum
            capillus-veneris GN=CRY2 PE=2 SV=1
          Length = 679

 Score =  353 bits (905), Expect = 6e-96
 Identities = 174/176 (98%), Positives = 174/176 (98%)
 Frame = +3

Query: 3    LEEGLGDTVEVQGMRNGFPANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGA 182
            LEEGLGDTVEVQGMRNGFPANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGA
Sbjct: 504  LEEGLGDTVEVQGMRNGFPANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGA 563

Query: 183  AEQGSALQAVLREVPANGHVQAVQAQSQRMAAPPMAMQNEYDDTHSTAESTSARHWSLAI 362
            A QGSALQAVLREVPANGHVQAVQAQSQRMAAPPMAMQN YDDTHSTAESTSARHWSLAI
Sbjct: 564  ANQGSALQAVLREVPANGHVQAVQAQSQRMAAPPMAMQNGYDDTHSTAESTSARHWSLAI 623

Query: 363  GLPVWSQYVPVCLHMRQDDSQVPLVPDLHHGVMSRRLPHAPPMVNFEATKTSSLSV 530
            GLPVWSQYVPVCLHMRQDDSQVPLVPDLHHGVMSRRLPHAPPMVNFEATKTSSLSV
Sbjct: 624  GLPVWSQYVPVCLHMRQDDSQVPLVPDLHHGVMSRRLPHAPPMVNFEATKTSSLSV 679


>tr|Q2V2M0|Q2V2M0_MARPA Cryptochrome OS=Marchantia paleacea var.
            diptera GN=MpCRYG PE=2 SV=1
          Length = 696

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 54/196 (27%), Positives = 73/196 (37%), Gaps = 22/196 (11%)
 Frame = +3

Query: 6    EEGLGDTVEVQGMRNGFPANMDIDR----GPGEKALLVRSPHDQMVPNVGVRRSTTGAV- 170
            EEGLG+TVE  G   G    MD+ R              S  DQ+VP +        A  
Sbjct: 501  EEGLGETVETPGSC-GPGVKMDVHRVVIRSSRAACSTASSRRDQLVPCMPTEDHKLAAAS 559

Query: 171  -----QGGAAEQGSALQAVLREVPANGHVQAVQAQSQRMAAPPMAMQNEYDDTHSTAEST 335
                 Q    E+   +Q         G +         + A P +  +  +  H   E  
Sbjct: 560  IMNWNQSPVDEEDEPVQPAFVPSQTGGLLDRPSDVRAEVIAHPPSDSSMAEAVHVDNELN 619

Query: 336  SARHWSLAIG---------LPVWSQYVPVCLHMRQDDSQVPLVPDLHHGVMSRRLPHAPP 488
            S    S A+G         +PVW Q           +  VP+VP++    M+RR  H+  
Sbjct: 620  STAESSAAVGRRSEESRGEVPVWPQSSSSRPQRPHLEGLVPVVPEVRRATMNRRHLHSMQ 679

Query: 489  MVNFEAT---KTSSLS 527
            MVN EA    KTSSLS
Sbjct: 680  MVNLEARTSHKTSSLS 695


>tr|O82786|O82786_ADICA Blue-light photoreceptor OS=Adiantum
           capillus-veneris GN=CRY1 PE=2 SV=1
          Length = 637

 Score = 41.2 bits (95), Expect = 0.048
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
 Frame = +3

Query: 63  NMDIDRGPGE---KALLVRSPHDQMVPNVGVR--RSTTGAVQGGAAEQGSALQ 206
           NMDIDRGP +   + L  RSPHDQMVP++ +   R     V   A+E+G+ +Q
Sbjct: 511 NMDIDRGPSDAPGRNLSDRSPHDQMVPSMFMETGRPAADGVGSHASERGANVQ 563


>tr|Q9SXG9|Q9SXG9_PHYPA Blue light photoreceptor cryptochrome
            OS=Physcomitrella patens GN=ppCRY1a PE=2 SV=1
          Length = 727

 Score = 38.1 bits (87), Expect = 0.40
 Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 30/197 (15%)
 Frame = +3

Query: 3    LEEGLGDTVEVQGMRNGFPANMDIDR-----GPGEKALLVRSPHDQMVPNV--------- 140
            LEEGLG+TVEV G        MD+ R               S  DQ+VP +         
Sbjct: 502  LEEGLGETVEVAGTGGPEHERMDVPRVMVHMQRDADMSCNSSRRDQLVPEIVPNQFHIRA 561

Query: 141  --GVRRSTTGAVQGGAAEQGSALQAVLREVP-------ANGHVQAVQAQSQRMAAP---P 284
               +   +   V+ G     +A+  V   V           HV+    +  + +AP   P
Sbjct: 562  HESIMNRSAAMVEDGEEAGRAAVPMVFASVRRGMGGNYGGHHVEGNGGEVAQASAPIQWP 621

Query: 285  MAMQNEYDDTHSTAESTS--ARHWSLAIGLPVWSQYVPVCLHMRQDDSQVPLVPDLHH-- 452
                 +Y +  STAES S   R  S    +PVWSQ V     ++  +    LVP++    
Sbjct: 622  TVTAVDY-ELDSTAESASVTGRGGSEGGTVPVWSQSVSARTPIQVREG---LVPEVRRGP 677

Query: 453  GVMSRRLPHAPPMVNFE 503
            G+  R+L  +   VN E
Sbjct: 678  GLSRRQLQASVQRVNLE 694


>tr|Q948Q6|Q948Q6_PHYPA Blue-light receptor cryptochrome
            OS=Physcomitrella patens GN=PpCRY1b PE=2 SV=1
          Length = 727

 Score = 38.1 bits (87), Expect = 0.40
 Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 30/197 (15%)
 Frame = +3

Query: 3    LEEGLGDTVEVQGMRNGFPANMDIDR-----GPGEKALLVRSPHDQMVPNV--------- 140
            LEEGLG+TVEV G        MD+ R               S  DQ+VP +         
Sbjct: 502  LEEGLGETVEVAGTGGPEHERMDVPRVMVHMQRDADMSCNSSRRDQLVPEIVPNQFHIRA 561

Query: 141  --GVRRSTTGAVQGGAAEQGSALQAVLREVP-------ANGHVQAVQAQSQRMAAP---P 284
               +   +   V+ G     +A+  V   V           HV+    +  + +AP   P
Sbjct: 562  HESIMNRSAAMVEDGEEAGRAAVPMVFASVRRGMGGNYGGHHVEGNGGEVAQASAPIQWP 621

Query: 285  MAMQNEYDDTHSTAESTS--ARHWSLAIGLPVWSQYVPVCLHMRQDDSQVPLVPDLHH-- 452
                 +Y +  STAES S   R  S    +PVWSQ V     ++  +    LVP++    
Sbjct: 622  TVTAVDY-ELDSTAESASVTGRGGSEGGTVPVWSQSVSARTPIQVREG---LVPEVRRGP 677

Query: 453  GVMSRRLPHAPPMVNFE 503
            G+  R+L  +   VN E
Sbjct: 678  GLSRRQLQASVQRVNLE 694


>tr|A9RD25|A9RD25_PHYPA AtCRY1/HY4-like cryptochrome blue light
           photoreceptor protein OS=Physcomitrella patens subsp.
           patens GN=Cry1b PE=4 SV=1
          Length = 413

 Score = 38.1 bits (87), Expect = 0.40
 Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 30/197 (15%)
 Frame = +3

Query: 3   LEEGLGDTVEVQGMRNGFPANMDIDR-----GPGEKALLVRSPHDQMVPNV--------- 140
           LEEGLG+TVEV G        MD+ R               S  DQ+VP +         
Sbjct: 188 LEEGLGETVEVAGTGGPEHERMDVPRVMVHMQRDADMSCNSSRRDQLVPEIVPNQFHIRA 247

Query: 141 --GVRRSTTGAVQGGAAEQGSALQAVLREVP-------ANGHVQAVQAQSQRMAAP---P 284
              +   +   V+ G     +A+  V   V           HV+    +  + +AP   P
Sbjct: 248 HESIMNRSAAMVEDGEEAGRAAVPMVFASVRRGMGGNYGGHHVEGNGGEVAQASAPIQWP 307

Query: 285 MAMQNEYDDTHSTAESTS--ARHWSLAIGLPVWSQYVPVCLHMRQDDSQVPLVPDLHH-- 452
                +Y +  STAES S   R  S    +PVWSQ V     ++  +    LVP++    
Sbjct: 308 TVTAVDY-ELDSTAESASVTGRGGSEGGTVPVWSQSVSARTPIQVREG---LVPEVRRGP 363

Query: 453 GVMSRRLPHAPPMVNFE 503
           G+  R+L  +   VN E
Sbjct: 364 GLSRRQLQASVQRVNLE 380


>tr|A9RD20|A9RD20_PHYPA Cryptochrome 1a OS=Physcomitrella patens
            subsp. patens GN=CRY1a PE=4 SV=1
          Length = 727

 Score = 38.1 bits (87), Expect = 0.40
 Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 30/197 (15%)
 Frame = +3

Query: 3    LEEGLGDTVEVQGMRNGFPANMDIDR-----GPGEKALLVRSPHDQMVPNV--------- 140
            LEEGLG+TVEV G        MD+ R               S  DQ+VP +         
Sbjct: 502  LEEGLGETVEVAGTGGPEHERMDVPRVMVHMQRDADMSCNSSRRDQLVPEIVPNQFHIRA 561

Query: 141  --GVRRSTTGAVQGGAAEQGSALQAVLREVP-------ANGHVQAVQAQSQRMAAP---P 284
               +   +   V+ G     +A+  V   V           HV+    +  + +AP   P
Sbjct: 562  HESIMNRSAAMVEDGEEAGRAAVPMVFASVRRGMGGNYGGHHVEGNGGEVAQASAPIQWP 621

Query: 285  MAMQNEYDDTHSTAESTS--ARHWSLAIGLPVWSQYVPVCLHMRQDDSQVPLVPDLHH-- 452
                 +Y +  STAES S   R  S    +PVWSQ V     ++  +    LVP++    
Sbjct: 622  TVTAVDY-ELDSTAESASVTGRGGSEGGTVPVWSQSVSARTPIQVREG---LVPEVRRGP 677

Query: 453  GVMSRRLPHAPPMVNFE 503
            G+  R+L  +   VN E
Sbjct: 678  GLSRRQLQASVQRVNLE 694


>tr|Q1JU52|Q1JU52_BRANA Cryptochrome1 OS=Brassica napus GN=cry1 PE=2
           SV=1
          Length = 680

 Score = 37.0 bits (84), Expect = 0.90
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
 Frame = +3

Query: 6   EEGLGDTVEVQGMRNGFPANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAA 185
           EEGLGD+ E       FP ++ ++     +   VR   DQMVP++          Q  + 
Sbjct: 505 EEGLGDSTEFVEAPIEFPRDITMEETEPTRLNPVRRYEDQMVPSITTSLIRPEEDQESSL 564

Query: 186 EQGSALQAVLREVPANGHVQAVQAQSQRMAAPPM-----AMQNEY-------DDTHSTAE 329
              ++      EVP N  V   QA+ Q   A P+     AM  E+       +   STAE
Sbjct: 565 SLRNSGGDSRAEVPRN-MVNTNQARQQEARADPVSNQVTAMIPEFNIRIVAENTEESTAE 623

Query: 330 STSARHWSLAIGL-PVWSQY 386
           S+S+       G+ P WS Y
Sbjct: 624 SSSSGRRERDGGIVPEWSGY 643


>tr|Q0GKU4|Q0GKU4_BRACM Cryptochrome 1 protein OS=Brassica
           campestris GN=cry1 PE=2 SV=1
          Length = 704

 Score = 37.0 bits (84), Expect = 0.90
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
 Frame = +3

Query: 6   EEGLGDTVEVQGMRNGFPANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAA 185
           EEGLGD+ E       FP ++ ++     +   VR   DQMVP++          Q  + 
Sbjct: 529 EEGLGDSTEFVEAPIEFPRDITMEETEPTRLNPVRRYEDQMVPSITTSLIRPEEDQESSL 588

Query: 186 EQGSALQAVLREVPANGHVQAVQAQSQRMAAPPM-----AMQNEY-------DDTHSTAE 329
              ++      EVP N  V   QA+ Q   A P+     AM  E+       +   STAE
Sbjct: 589 SLRNSGGDSRAEVPRN-MVNTNQARQQEARADPVSNQVTAMIPEFNIRIVAENTEESTAE 647

Query: 330 STSARHWSLAIGL-PVWSQY 386
           S+S+       G+ P WS Y
Sbjct: 648 SSSSGRRERDGGIVPEWSGY 667


>tr|Q1AW01|Q1AW01_RUBXD Type IV pilus assembly protein PilM
           OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC
           16129) GN=Rxyl_1465 PE=4 SV=1
          Length = 379

 Score = 35.4 bits (80), Expect = 2.6
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +3

Query: 57  PANMDIDRGPGEKALLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLR 218
           P  MDIDR   +   L  SP   ++ +VG RR   G + GG       L A LR
Sbjct: 15  PIGMDIDRSAIKAVQLSGSPGGYVLEHVGYRRLPEGVISGGEVSDPELLAAELR 68