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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960529
Clone id TST39A01NGRL0007_K16
Library
Length 649
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_K16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGCCACTTCTCTCGTCAACGAGCAGGCCTGCTCGAGCGGAGTTTGTTCGCCACTTGTCTC
TCTAGACGAGGGCTTGTAGCTTTCTGCGGGCATGGCGTCTACTGCCACTAGCCCTACTGT
TGGCTCCGTCCAGAATTTCACACCAGTAAATGGAACCCCCGTCCGTGTAAGGAGCACCGC
TCCTGCTTCTGCCTTCTTTGGGGCCTCCCTGAAGAAAACCGCCCCTTCCGTTGTATCTAG
CAATATTGCCAAGCATTTCGTTGTGCACGCTTCGGAGGATGAGGGCAAGCAGACGAAGAA
GGACAGATGGGCTGGTCTTGCATATGACACCTCCGATGACCAGCAAGACATCACTCGTGG
AAAAGGCATGGTGGACGCTCTTTTCCAAGGTGCAGTTGGTGTAGGAACTCAACACGCCGT
CATGAGTTCGTATGACTATATTAGCCAGGGCCAGAGAATGTTCTCCATGGACAACATGAA
GGATGGCTATTACATCGCCCCTGCCTTCATGGACAAACTGGTTGTGCACATTGCCAAGAA
CTTCATGAACTTACCAAATATCAAGGTGCCTTTGATTCTTGGTATTTGGGGTGGCAAGGG
GCAAGGCAAGTCCTTCCAGTGTGAGCTTGTCTTTTCAAAGTTGGGAATC
■■Homology search results ■■ -
sp_hit_id Q7X999
Definition sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata
Align length 184
Score (bit) 228.0
E-value 2.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960529|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K16, 5'
         (649 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   228   2e-59
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   228   2e-59
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   223   7e-58
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   222   1e-57
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   219   7e-57
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   217   4e-56
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   217   5e-56
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   216   8e-56
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   215   2e-55
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   212   2e-54
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   210   5e-54
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   209   1e-53
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   207   4e-53
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   207   4e-53
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   195   2e-49
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   154   5e-37
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...    89   2e-17
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...    89   3e-17
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...    74   7e-13
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus...    35   0.34 
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ...    33   1.7  
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ...    33   1.7  
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    32   2.2  
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem...    32   3.8  
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom...    32   3.8  
sp|P37539|YAAR_BACSU Uncharacterized protein yaaR OS=Bacillus su...    31   4.9  
sp|Q555D2|Y6503_DICDI Uncharacterized protein DDB_G0274915 OS=Di...    31   4.9  
sp|P57697|PSMA_HALSA Proteasome subunit alpha OS=Halobacterium s...    31   4.9  
sp|Q29076|PO2F1_PIG POU domain, class 2, transcription factor 1 ...    31   4.9  
sp|Q9WTU0|PHF2_MOUSE PHD finger protein 2 OS=Mus musculus GN=Phf...    31   4.9  

>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  228 bits (581), Expect = 2e-59
 Identities = 117/184 (63%), Positives = 140/184 (76%), Gaps = 2/184 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPV--NGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASE 277
           A   TVG+V N  P+  NG+  R  S  P++AFFG+SLKK+A     ++     +V    
Sbjct: 3   AAYSTVGAV-NRAPLSLNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEI 60

Query: 278 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 457
            E +QT KD+W GLAYD SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R
Sbjct: 61  SEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLR 120

Query: 458 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFS 637
            +++DN  DG+YIAPAFMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFA 180

Query: 638 KLGI 649
           K+GI
Sbjct: 181 KMGI 184


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  228 bits (581), Expect = 2e-59
 Identities = 117/184 (63%), Positives = 140/184 (76%), Gaps = 2/184 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPV--NGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASE 277
           A   TVG+V N  P+  NG+  R  S  P++AFFG+SLKK+A     ++     +V    
Sbjct: 3   AAYSTVGAV-NRAPLSLNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEI 60

Query: 278 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 457
            E +QT KD+W GLAYD SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R
Sbjct: 61  SEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLR 120

Query: 458 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFS 637
            +++DN  DG+YIAPAFMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFA 180

Query: 638 KLGI 649
           K+GI
Sbjct: 181 KMGI 184


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  223 bits (568), Expect = 7e-58
 Identities = 117/185 (63%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
 Frame = +2

Query: 98  STATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFV-VHAS 274
           +TA S T+GSV N  P N       ++ P+S F G+SLKK      +S ++   + + AS
Sbjct: 2   ATAVS-TIGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVAS 59

Query: 275 EDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 454
            DE KQT KDRW GLA+DTSDDQQDITRGKG VD+LFQ   G GT  A+MSSY+YIS G 
Sbjct: 60  VDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGL 119

Query: 455 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 634
           R ++ DN  DGYYIAPAFMDKLVVHI KNFM LPN+KVPLILGIWGGKGQGKSFQCELVF
Sbjct: 120 RQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVF 179

Query: 635 SKLGI 649
           +K+ I
Sbjct: 180 AKMRI 184


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  222 bits (566), Expect = 1e-57
 Identities = 111/182 (60%), Positives = 136/182 (74%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDE 283
           AT  T+G+V N T +N +        P SAF G+ LK ++    S  +  +F + A +DE
Sbjct: 3   ATVSTIGAV-NRTTLNNS--NYGGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDE 59

Query: 284 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 463
            KQT+KD+W GLA+DTSDDQQDITRGKG+ D LFQ  +G GT +AV+SSY+YIS G R +
Sbjct: 60  EKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDY 119

Query: 464 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 643
           S DN  DG+YIAPAFMDKL VHI KNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF+K+
Sbjct: 120 SYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKM 179

Query: 644 GI 649
           GI
Sbjct: 180 GI 181


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  219 bits (559), Expect = 7e-57
 Identities = 118/187 (63%), Positives = 140/187 (74%), Gaps = 5/187 (2%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKH--FVVHASE 277
           A+  TVG+V N   +N       ++AP SAFFG SLKK   S V ++   +  F + A+E
Sbjct: 3   ASVSTVGAV-NRAILNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAE 61

Query: 278 ---DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 448
              +E +QT KDRW GLAYD SDDQQDITRGKGMVD LFQ  +  GT +AVMSSY+Y+S 
Sbjct: 62  KEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLST 121

Query: 449 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 628
           G R   +DN+KDG+YIAPAF+DKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCEL
Sbjct: 122 GLRQ--LDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 179

Query: 629 VFSKLGI 649
           VF+K+GI
Sbjct: 180 VFAKMGI 186


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  217 bits (553), Expect = 4e-56
 Identities = 112/165 (67%), Positives = 124/165 (75%), Gaps = 8/165 (4%)
 Frame = +2

Query: 179 APASA---FFGASLKKTAPSVV-----SSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTS 334
           APAS    F G  LKK   S V     SSNI +  V+    DEGKQT +DRW GLAYD S
Sbjct: 11  APASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDIS 70

Query: 335 DDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMD 514
           DDQQDITRGKG VD+LFQ   G GT  AV+SSY+Y+SQG R +  DN   G+YIAPAFMD
Sbjct: 71  DDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMD 130

Query: 515 KLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGI 649
           KLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GI
Sbjct: 131 KLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 175


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  217 bits (552), Expect = 5e-56
 Identities = 113/187 (60%), Positives = 143/187 (76%), Gaps = 5/187 (2%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSN--IAKHFVVHASE 277
           A+  TVG+V N T +N       ++ P+SAFFG SLKK   S V ++   +  F + A++
Sbjct: 3   ASLSTVGAV-NRTLLNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAAD 61

Query: 278 ---DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 448
              +E +QT+ DRW GLAYD SDDQQDITRGKG+VD+LFQ  +  GT +AV+SS+ Y+S 
Sbjct: 62  KEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSA 121

Query: 449 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 628
           G R ++ DN+KDG+YIAPAF+DKLVVHIAKNFM LPNIKVPLILG+WGGKGQGKSFQCEL
Sbjct: 122 GLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCEL 181

Query: 629 VFSKLGI 649
           VF+K+GI
Sbjct: 182 VFAKMGI 188


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  216 bits (550), Expect = 8e-56
 Identities = 112/183 (61%), Positives = 133/183 (72%), Gaps = 5/183 (2%)
 Frame = +2

Query: 116 TVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS----NIAKHFVVHASE-D 280
           T+G+V N TP++       ++ P++AFFG +LKK     VSS    N +   V    + D
Sbjct: 7   TIGAV-NKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVD 65

Query: 281 EGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRM 460
             KQT  DRW GL  D SDDQQDITRGKGMVD+LFQ   G GT HAV+ SY+Y+SQG R 
Sbjct: 66  PKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQ 125

Query: 461 FSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSK 640
           +++DN  DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF K
Sbjct: 126 YNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRK 185

Query: 641 LGI 649
           +GI
Sbjct: 186 MGI 188


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  215 bits (547), Expect = 2e-55
 Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 2/184 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPV--NGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASE 277
           A   TVG++ N  P+  NG+     S APAS F G  +   +    S+  +       + 
Sbjct: 3   AAVSTVGAI-NRAPLSLNGSGSGAVS-APASTFLGKKVVTVSRFAQSNKKSNGSFKVLAV 60

Query: 278 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 457
            E KQT  DRW GLAYDTSDDQQDITRGKGMVD++FQ  +G GT HAV+SSY+Y+SQG R
Sbjct: 61  KEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLR 120

Query: 458 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFS 637
            +++DNM DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELV +
Sbjct: 121 QYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMA 180

Query: 638 KLGI 649
           K+GI
Sbjct: 181 KMGI 184


>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA
           PE=2 SV=1
          Length = 439

 Score =  212 bits (539), Expect = 2e-54
 Identities = 109/187 (58%), Positives = 131/187 (70%), Gaps = 5/187 (2%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASE- 277
           ATS +     N  P++       ++ P++AFFG +LKK     VSS  +    +  A+E 
Sbjct: 2   ATSVSTIGAANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEE 61

Query: 278 ---DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 448
              D  KQT  DRW GL  D SDDQQDI RGKGMVD+LFQ   G GT HAV+ SY+Y+SQ
Sbjct: 62  KDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQ 121

Query: 449 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 628
           G R ++MDN  DG+YIAP+FMDKLVVHI KNF+ LPNIKVPLILG+WGGKGQGKSFQCEL
Sbjct: 122 GLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCEL 181

Query: 629 VFSKLGI 649
           VF K+GI
Sbjct: 182 VFRKMGI 188
tr_hit_id A7NYV5
Definition tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 187
Score (bit) 233.0
E-value 6.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960529|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K16, 5'
         (649 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   233   6e-60
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   233   1e-59
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   231   2e-59
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   230   6e-59
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   229   1e-58
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   228   2e-58
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   228   2e-58
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   228   2e-58
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   228   2e-58
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   228   2e-58
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   228   2e-58
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   228   2e-58
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   226   7e-58
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   224   4e-57
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   224   4e-57
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   224   5e-57
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   223   8e-57
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   221   3e-56
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   220   7e-56
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   219   9e-56
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   218   3e-55
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   217   4e-55
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   217   4e-55
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   216   7e-55
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   216   7e-55
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   215   2e-54
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   215   2e-54
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar...   215   2e-54
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   215   2e-54
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   213   1e-53

>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  233 bits (595), Expect = 6e-60
 Identities = 121/187 (64%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
 Frame = +2

Query: 92  MASTATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVH 268
           MA+T +  T+G+V N TP++       ++ P+SAFFG+SLKK +       IA   F V 
Sbjct: 1   MATTVS--TIGAV-NRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVV 57

Query: 269 ASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 448
           A  DE +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S 
Sbjct: 58  AEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLST 117

Query: 449 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 628
           G R +++DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCEL
Sbjct: 118 GLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 177

Query: 629 VFSKLGI 649
           VFSK+GI
Sbjct: 178 VFSKMGI 184


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  233 bits (593), Expect = 1e-59
 Identities = 121/187 (64%), Positives = 143/187 (76%), Gaps = 1/187 (0%)
 Frame = +2

Query: 92  MASTATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVH 268
           MA+T +  T+G+V N TP++        + P+SAFFG+SLKK +       IA   F V 
Sbjct: 1   MATTVS--TIGAV-NRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVV 57

Query: 269 ASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 448
           A  DE +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S 
Sbjct: 58  AEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLST 117

Query: 449 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 628
           G R +++DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCEL
Sbjct: 118 GLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 177

Query: 629 VFSKLGI 649
           VFSK+GI
Sbjct: 178 VFSKMGI 184


>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
          Length = 471

 Score =  231 bits (590), Expect = 2e-59
 Identities = 117/162 (72%), Positives = 131/162 (80%)
 Frame = +2

Query: 164 RVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQ 343
           RV+ST P+SAFFG   K +A   +     K  VV  +E E  +TK DRWAGL  D SDDQ
Sbjct: 17  RVKSTVPSSAFFGCKSKVSANGTLGIANGKSRVV--AEAESSKTKVDRWAGLGNDISDDQ 74

Query: 344 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 523
           QDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQGQR +SMDN+KDG YIAPAFMDKLV
Sbjct: 75  QDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLV 134

Query: 524 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGI 649
           +HIAKNFMNLP IKVPLILGIWGGKGQGKSFQCELV SKLGI
Sbjct: 135 IHIAKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSKLGI 176


>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 461

 Score =  230 bits (586), Expect = 6e-59
 Identities = 123/185 (66%), Positives = 142/185 (76%), Gaps = 3/185 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASE 277
           AT  TVG+V N  P+        ST P SAFFG SLKK + S   +S I+   F V A E
Sbjct: 3   ATISTVGAV-NRAPLALNGSGAGSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEE 61

Query: 278 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 454
            DE KQT+KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + V+SSY+Y+SQG 
Sbjct: 62  YDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGL 121

Query: 455 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 634
           R +++DNM DGYYIAPAFMDK+VVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 122 RTYNLDNMMDGYYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVF 181

Query: 635 SKLGI 649
           +K+GI
Sbjct: 182 AKMGI 186


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  229 bits (584), Expect = 1e-58
 Identities = 117/183 (63%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASED 280
           AT  T+G+V N  P+N       ++ P+SAF G SLKK +  +     +  +F V A  D
Sbjct: 3   ATISTLGAV-NRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVD 61

Query: 281 EGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRM 460
           E KQT KD+W GLA+D SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSYDYIS G R 
Sbjct: 62  EEKQTSKDKWKGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQ 121

Query: 461 FSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSK 640
           +++DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K
Sbjct: 122 YNLDNTMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 181

Query: 641 LGI 649
           +GI
Sbjct: 182 MGI 184


>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 476

 Score =  228 bits (582), Expect = 2e-58
 Identities = 121/184 (65%), Positives = 139/184 (75%), Gaps = 2/184 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASE 277
           AT  TVG+V N  P+        ST P SAFFG SLKK + S   +S I+   F V A  
Sbjct: 3   ATISTVGAV-NTAPLALNGSGAGSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEY 61

Query: 278 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 457
           DE KQT KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + ++SSY+Y+SQG R
Sbjct: 62  DEKKQTDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLR 121

Query: 458 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFS 637
            +++DN  DGYYIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+
Sbjct: 122 TYNLDNNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFA 181

Query: 638 KLGI 649
           K+GI
Sbjct: 182 KMGI 185


>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 475

 Score =  228 bits (582), Expect = 2e-58
 Identities = 122/185 (65%), Positives = 142/185 (76%), Gaps = 3/185 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASE 277
           AT  TVG+V N  P+        ST P SAFFG SLKK + S   +S I+   F V A E
Sbjct: 3   ATISTVGAV-NRAPLALNGSGAGSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEE 61

Query: 278 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 454
            DE KQT+KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + V+SSY+Y+SQG 
Sbjct: 62  YDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGL 121

Query: 455 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 634
           R +++DNM DG+YIAPAFMDK+VVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 122 RTYNLDNMMDGFYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVF 181

Query: 635 SKLGI 649
           +K+GI
Sbjct: 182 AKMGI 186


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  228 bits (581), Expect = 2e-58
 Identities = 121/185 (65%), Positives = 141/185 (76%), Gaps = 3/185 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPV--NGTPVRVRSTAPASAFFGASLKKTAPSVVSSNI-AKHFVVHAS 274
           A   TVG++ N  P+  NG+     ST P SAFFG SLKK A    +  + +  F V A 
Sbjct: 3   AAVSTVGAI-NSAPLSLNGSGA-AGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAE 60

Query: 275 EDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 454
            DE KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G 
Sbjct: 61  IDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGL 120

Query: 455 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 634
           R + ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF
Sbjct: 121 RTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 635 SKLGI 649
           +K+GI
Sbjct: 180 AKMGI 184


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  228 bits (581), Expect = 2e-58
 Identities = 121/185 (65%), Positives = 141/185 (76%), Gaps = 3/185 (1%)
 Frame = +2

Query: 104 ATSPTVGSVQNFTPV--NGTPVRVRSTAPASAFFGASLKKTAPSVVSSNI-AKHFVVHAS 274
           A   TVG++ N  P+  NG+     ST P SAFFG SLKK A    +  + +  F V A 
Sbjct: 3   AAVSTVGAI-NSAPLSLNGSGA-AGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAE 60

Query: 275 EDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 454
            DE KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G 
Sbjct: 61  IDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGL 120

Query: 455 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 634
           R + ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF
Sbjct: 121 RTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 635 SKLGI 649
           +K+GI
Sbjct: 180 AKMGI 184


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 363

 Score =  228 bits (581), Expect = 2e-58
 Identities = 114/187 (60%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
 Frame = +2

Query: 92  MASTATSPTVGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVH 268
           MA+ A +    +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V 
Sbjct: 1   MATAAAAVGSITVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVV 60

Query: 269 ASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 448
           A  DEGKQT KD+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS 
Sbjct: 61  AEIDEGKQTDKDKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYIST 120

Query: 449 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 628
            QR +  DN  DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCEL
Sbjct: 121 AQRTYDFDNTMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 180

Query: 629 VFSKLGI 649
           VF+KLGI
Sbjct: 181 VFAKLGI 187