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DK960535
Clone id TST39A01NGRL0007_K22
Library
Length 595
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_K22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GTTTGTGTTTTTGGGTAGAGGAATGTGCAAAAACTTCTGGTAGGGAGGTATGCCACAATT
GAGGTCTGGTTCCTTGCAATCACATTAATGCTCGCATCTTACATGAGATTTTTGGACTAT
TGGTTTAGACTCTTCTTATGATTGGTAATAACATCTGGCTGGGAGGCGTGCGACAGTCAA
GTTCTGGTTCCTTGCATATGCACTACTGCTTCAATGCTACATGAAAATCTTGGTGTAGAT
GTTACTCGTCATTGGGTAGAGGAGTGAGAGGCATGCCAAAGTCATATGCAGCTGTGCCTT
CTCACCAGCATCTGTCCATTTCTTTTCTGAATATTGGGGTTGGGGAGAGGTTTGTATGGG
AAGCTATGCTTAAAGACAGGTGTCTTTCATTTTGAATGCATCCTGACAGCCAAATATGCA
CATGTAGAGTCAGTTAAATATTTTATTTCTTTTCTAGTGTTCGCAATATTTGGTTCCACA
TTAAGTCTCGATGAAGCTTTTTCCATTGATACCCCCATCTTAGACATCATCCTGTCATTT
TTACATGGTACAAGATATCAATGTTTCCCTTGTACGTTCCTCTTACATAATTCTG
■■Homology search results ■■ -
sp_hit_id O42385
Definition sp|O42385|5H1AA_FUGRU 5-hydroxytryptamine receptor 1A-alpha OS=Fugu rubripes
Align length 79
Score (bit) 35.4
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960535|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K22, 5'
         (595 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O42385|5H1AA_FUGRU 5-hydroxytryptamine receptor 1A-alpha OS=F...    35   0.22 
sp|Q6XXY0|5HT1A_VULVU 5-hydroxytryptamine receptor 1A OS=Vulpes ...    34   0.49 
sp|P19327|5HT1A_RAT 5-hydroxytryptamine receptor 1A OS=Rattus no...    34   0.49 
sp|Q9N296|5HT1A_PONPY 5-hydroxytryptamine receptor 1A OS=Pongo p...    34   0.49 
sp|Q9N298|5HT1A_PANTR 5-hydroxytryptamine receptor 1A OS=Pan tro...    34   0.49 
sp|Q64264|5HT1A_MOUSE 5-hydroxytryptamine receptor 1A OS=Mus mus...    34   0.49 
sp|P08908|5HT1A_HUMAN 5-hydroxytryptamine receptor 1A OS=Homo sa...    34   0.49 
sp|Q0EAB6|5HT1A_HORSE 5-hydroxytryptamine receptor 1A OS=Equus c...    34   0.49 
sp|Q9N297|5HT1A_GORGO 5-hydroxytryptamine receptor 1A OS=Gorilla...    34   0.49 
sp|Q6XXX9|5HT1A_CANFA 5-hydroxytryptamine receptor 1A OS=Canis f...    34   0.49 
sp|Q98998|5HT1A_XENLA 5-hydroxytryptamine receptor 1A OS=Xenopus...    33   0.83 
sp|O42384|5H1AB_FUGRU 5-hydroxytryptamine receptor 1A-beta OS=Fu...    33   1.4  
sp|Q7VQW8|HIS7_BLOFL Histidine biosynthesis bifunctional protein...    30   9.2  
sp|Q6IQ26|DEN5A_HUMAN DENN domain-containing protein 5A OS=Homo ...    30   9.2  

>sp|O42385|5H1AA_FUGRU 5-hydroxytryptamine receptor 1A-alpha OS=Fugu
           rubripes GN=htr1aa PE=3 SV=1
          Length = 423

 Score = 35.4 bits (80), Expect = 0.22
 Identities = 20/79 (25%), Positives = 38/79 (48%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G + CD  + +  +
Sbjct: 77  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQDICDLFIALDVL 127

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 128 CCTSSILH-LCAIALDRYW 145


>sp|Q6XXY0|5HT1A_VULVU 5-hydroxytryptamine receptor 1A OS=Vulpes
           vulpes GN=HTR1A PE=3 SV=1
          Length = 423

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|P19327|5HT1A_RAT 5-hydroxytryptamine receptor 1A OS=Rattus
           norvegicus GN=Htr1a PE=2 SV=1
          Length = 422

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|Q9N296|5HT1A_PONPY 5-hydroxytryptamine receptor 1A OS=Pongo
           pygmaeus GN=HTR1A PE=3 SV=1
          Length = 422

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|Q9N298|5HT1A_PANTR 5-hydroxytryptamine receptor 1A OS=Pan
           troglodytes GN=HTR1A PE=3 SV=1
          Length = 422

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|Q64264|5HT1A_MOUSE 5-hydroxytryptamine receptor 1A OS=Mus
           musculus GN=Htr1a PE=2 SV=1
          Length = 421

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|P08908|5HT1A_HUMAN 5-hydroxytryptamine receptor 1A OS=Homo
           sapiens GN=HTR1A PE=1 SV=3
          Length = 422

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|Q0EAB6|5HT1A_HORSE 5-hydroxytryptamine receptor 1A OS=Equus
           caballus GN=HTR1A PE=2 SV=1
          Length = 422

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|Q9N297|5HT1A_GORGO 5-hydroxytryptamine receptor 1A OS=Gorilla
           gorilla gorilla GN=HTR1A PE=3 SV=1
          Length = 422

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>sp|Q6XXX9|5HT1A_CANFA 5-hydroxytryptamine receptor 1A OS=Canis
           familiaris GN=HTR1A PE=3 SV=1
          Length = 423

 Score = 34.3 bits (77), Expect = 0.49
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136
tr_hit_id Q4T0Z1
Definition tr|Q4T0Z1|Q4T0Z1_TETNG Chromosome 12 SCAF10787, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 79
Score (bit) 36.2
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960535|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_K22, 5'
         (595 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4T0Z1|Q4T0Z1_TETNG Chromosome 12 SCAF10787, whole genome sho...    36   1.5  
tr|B0S6X1|B0S6X1_DANRE Novel protein similar to vertebrate 5-hyd...    36   1.5  
tr|A7DW69|A7DW69_PLAFE Serotonin receptor (Fragment) OS=Platicht...    35   3.3  
tr|Q8BGS4|Q8BGS4_MOUSE Putative uncharacterized protein OS=Mus m...    34   5.6  
tr|A3UIC6|A3UIC6_9RHOB Putative uncharacterized protein OS=Ocean...    34   5.6  
tr|Q8HYB0|Q8HYB0_CANFA Serotonin receptor 1A OS=Canis familiaris...    34   5.6  
tr|Q5ZGX3|Q5ZGX3_HUMAN 5-hydroxytryptamine receptor 1A (5-hydrox...    34   5.6  
tr|A8K5W4|A8K5W4_HUMAN cDNA FLJ75939, highly similar to Homo sap...    34   5.6  
tr|Q68HY0|Q68HY0_9MUSC Cytochrome c oxidase subunit 1 (Fragment)...    34   7.2  
tr|Q8BZP1|Q8BZP1_MOUSE Putative uncharacterized protein OS=Mus m...    34   7.3  

>tr|Q4T0Z1|Q4T0Z1_TETNG Chromosome 12 SCAF10787, whole genome
           shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00009075001 PE=3 SV=1
          Length = 422

 Score = 36.2 bits (82), Expect = 1.5
 Identities = 21/79 (26%), Positives = 38/79 (48%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G E CD  + +  +
Sbjct: 77  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQEICDIFISLDVL 127

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 128 CCTSSILH-LCAIALDRYW 145


>tr|B0S6X1|B0S6X1_DANRE Novel protein similar to vertebrate
           5-hydroxytryptamine (Serotonin) receptor 1A (HTR1A)
           OS=Danio rerio GN=htr1a PE=3 SV=1
          Length = 398

 Score = 36.2 bits (82), Expect = 1.5
 Identities = 21/79 (26%), Positives = 38/79 (48%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G E CD  + +  +
Sbjct: 60  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQEMCDIFISLDVL 110

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 111 CCTSSILH-LCAIALDRYW 128


>tr|A7DW69|A7DW69_PLAFE Serotonin receptor (Fragment) OS=Platichthys
           flesus GN=5HTR PE=2 SV=1
          Length = 381

 Score = 35.0 bits (79), Expect = 3.3
 Identities = 20/79 (25%), Positives = 38/79 (48%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G + CD  + +  +
Sbjct: 34  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQDICDLFISLDVL 84

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 85  CCTSSILH-LCAIALDRYW 102


>tr|Q8BGS4|Q8BGS4_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=Htr1a PE=2 SV=1
          Length = 421

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>tr|A3UIC6|A3UIC6_9RHOB Putative uncharacterized protein
           OS=Oceanicaulis alexandrii HTCC2633 GN=OA2633_10044 PE=4
           SV=1
          Length = 151

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVI 150
           RN+ K++V   A I VW LAIT+++A+   F   WF   L LV+
Sbjct: 58  RNLLKIIVNP-AMIAVWLLAITMIIANPALFTQGWFHFKLLLVL 100


>tr|Q8HYB0|Q8HYB0_CANFA Serotonin receptor 1A OS=Canis familiaris
           GN=HTR1A PE=3 SV=1
          Length = 423

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>tr|Q5ZGX3|Q5ZGX3_HUMAN 5-hydroxytryptamine receptor 1A
           (5-hydroxytryptamine (Serotonin) receptor 1A) OS=Homo
           sapiens GN=5HT1A PE=2 SV=1
          Length = 422

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>tr|A8K5W4|A8K5W4_HUMAN cDNA FLJ75939, highly similar to Homo
           sapiens 5-hydroxytryptamine (serotonin) receptor 1A
           (HTR1A), mRNA OS=Homo sapiens PE=2 SV=1
          Length = 422

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 19  RNVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCI 198
           +NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +
Sbjct: 68  QNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVL 118

Query: 199 CTTASMLHENLGVDVTRHW 255
           C T+S+LH    + + R+W
Sbjct: 119 CCTSSILH-LCAIALDRYW 136


>tr|Q68HY0|Q68HY0_9MUSC Cytochrome c oxidase subunit 1 (Fragment)
           OS=Fergusonina purcelli GN=COI PE=3 SV=1
          Length = 248

 Score = 33.9 bits (76), Expect = 7.2
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
 Frame = +3

Query: 261 GVRGMPKSYAAVPSHQHL---------SISFLNIGVGERFVWEAMLKDRCLSF*MHPDSQ 413
           G+ GMP+ Y+  P    L         SISFL+I +    +WE+M+  R + +  H +S 
Sbjct: 180 GLAGMPRRYSDYPDSYTLWNIMSSIGASISFLSIIMFIMIMWESMISQRSIMYTTHLNSS 239

Query: 414 I 416
           I
Sbjct: 240 I 240


>tr|Q8BZP1|Q8BZP1_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=Htr1a PE=2 SV=1
          Length = 421

 Score = 33.9 bits (76), Expect = 7.3
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +1

Query: 22  NVQKLLVGRYATIEVWFLAITLMLASYMRFLDYWFRLFL*LVITSGWEACDSQVLVPCIC 201
           NV   L+G  A  ++    + L +A+  + L+ W         T G   CD  + +  +C
Sbjct: 69  NVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKW---------TLGQVTCDLFIALDVLC 119

Query: 202 TTASMLHENLGVDVTRHW 255
            T+S+LH    + + R+W
Sbjct: 120 CTSSILH-LCAIALDRYW 136