DK960538 |
Clone id |
TST39A01NGRL0007_L01 |
Library |
TST39 |
Length |
669 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_L01. 5' end sequence. |
Accession |
DK960538 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL662Contig1 |
Sequence |
CCGACTCTTTTGCATCGCTGCTACCTACAAATCGCATCTCTCTCTCATACGGAGTAATCT GTGTCTCGGCACGCGACACACACACACACCCCACTCTCAGTTCCGAATTTGCTGCTCTGG GTTCCTTCCGTCAAGATCATCTGCTCCGCTTGCATTCACCTTTCTCATCTCGTGCTCTTT ACATGGGCGTCACTGCCGTCAATGCTATGCAGCATGCAGCTCTTGTCAAGGATCGGCTGT ACGCAGGGGACGATCATCTCCATTTCACGCACAGAGGGAAACAAAGGCTATCGCTTAAGC AATCTTCCCTGAAATGGCCTTCGTCTCCACGCAGACCTCGGCGTGCTCTTCTTCGTAGAA GCTCAACAGGTCATGCAGCTGCCATGAAGCGCCCAGTTTCTGTTTCCGATCCTGTGGCTT CCAGCGTATCCNAGCCCTCTGCAGCTCGCAAGCTGCGTTCTTCTTTCAATCCGTCGACAT CTGCAGCTCCAGCATCAGGTATGGAGCCTCAGCAGCTCTTCGACCTACCTAGCAGAGAAA CCCTTTCGAGCTTAAAACAAGAGCTAGAGGATGATCTGGATGTGGATTATAGAGAAGCTG CTGCTGTTCTTGAGCACCTCTTCTCAGAGAGTCCATCAGTAGAGCTCGATTTCAAGGCCG CAACAGAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P01055 |
Definition |
sp|P01055|IBB1_SOYBN Bowman-Birk type proteinase inhibitor OS=Glycine max |
Align length |
75 |
Score (bit) |
32.0 |
E-value |
3.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0W487 |
Definition |
tr|B0W487|B0W487_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus |
Align length |
83 |
Score (bit) |
36.2 |
E-value |
1.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960538|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_L01, 5' (669 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0W487|B0W487_CULQU Putative uncharacterized protein OS=Culex... 36 1.9 tr|Q2K797|Q2K797_RHIEC Hypothetical conserved protein OS=Rhizobi... 36 2.5 tr|Q22D56|Q22D56_TETTH Insect antifreeze protein OS=Tetrahymena ... 36 2.5 tr|Q22Z13|Q22Z13_TETTH Zinc finger domain, LSD1 subclass family ... 35 3.2 tr|A0C1C3|A0C1C3_PARTE Chromosome undetermined scaffold_141, who... 35 3.2 tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena ... 35 5.5 tr|Q1JTH9|Q1JTH9_TOXGO Hyothetical protein OS=Toxoplasma gondii ... 35 5.5 tr|Q9NCQ8|Q9NCQ8_9CUCU Antifreeze protein 11 OS=Dendroides canad... 34 9.4
>tr|B0W487|B0W487_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ001847 PE=4 SV=1 Length = 1170
Score = 36.2 bits (82), Expect = 1.9 Identities = 26/83 (31%), Positives = 37/83 (44%) Frame = +2
Query: 38 LSLIRSNLCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGRHCRQCYAAC 217 +S RSN+ L H H HS+ G S SS+ + + C H R +CY C Sbjct: 428 ISRSRSNVELNRSHHHHHHSK------GRRSSSSSSATSESSSEDCCRHTRRKHRCYRKC 481
Query: 218 SSCQGSAVRRGRSSPFHAQRETK 286 SS + S R + H + E+K Sbjct: 482 SSSKSS---RSKDRSSHRREESK 501
>tr|Q2K797|Q2K797_RHIEC Hypothetical conserved protein OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=RHE_CH02512 PE=4 SV=1 Length = 110
Score = 35.8 bits (81), Expect = 2.5 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Frame = +2
Query: 20 ATYKSHLSLIRSN-LCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGRH- 193 A Y LS+ + L LG HT PH + + C+ R+SA F++ S H +H Sbjct: 17 ACYSECLSMAMGHCLELGGEHTKPPHFKLMMVCAEI--CRTSA----HFMLIGSEHHKHV 70
Query: 194 CRQCYAACSSCQGSAVRRG 250 CR+C C+ C R G Sbjct: 71 CRECAEICAQCADDCERIG 89
>tr|Q22D56|Q22D56_TETTH Insect antifreeze protein OS=Tetrahymena thermophila SB210 GN=TTHERM_01002620 PE=4 SV=1 Length = 4016
Score = 35.8 bits (81), Expect = 2.5 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 12/142 (8%) Frame = +2
Query: 110 CCSGFLPSRSSAPLAFTFLISCSLHGRHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKA 289 C SGF S S L F L G C QC ++C SC G G ++ + Sbjct: 2527 CYSGFFLSSSQCTLCFQ---GYYLDGNQCLQCDSSCLSCNGP----GPNNCIVCSQPN-- 2577
Query: 290 IA*AIFPEMAFVST-QTSACSSS*KLN-----------RSCSCHEAPSFCFRSCGFQRIX 433 +F+ST Q + C+S L+ + C S C ++C Q I Sbjct: 2578 ---------SFISTIQNNICTSLCDLSQGQFIDKYTNQQQQICRSCGSLC-QTCDAQNI- 2626
Query: 434 ALCSSQAAFFFQSVDICSSSIR 499 C+S FF S ++CS I+ Sbjct: 2627 --CTSCVQGFFLSGNVCSPCIQ 2646
>tr|Q22Z13|Q22Z13_TETTH Zinc finger domain, LSD1 subclass family protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00117540 PE=4 SV=2 Length = 2236
Score = 35.4 bits (80), Expect = 3.2 Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Frame = +2
Query: 194 CRQCYAACSSCQGSAVRR---GRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS*KL 364 C+QC ++C SC GS RS F + K+I + F TQT+ C Sbjct: 777 CKQCDSSCKSCNGSTASNCTDCRSGLFLQNNQCKSICDGSY----FGMTQTNTCQ----- 827
Query: 365 NRSCSCHEAPSFCFRSCGFQRIXALCSSQAAFFF-----QSVDICSSS 493 CH + CF SC I S QA +F Q V +C+S+ Sbjct: 828 ----PCHLS---CF-SCNGSSINNCLSCQAPRYFDPTTNQCVLVCNSN 867
>tr|A0C1C3|A0C1C3_PARTE Chromosome undetermined scaffold_141, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00034066001 PE=4 SV=1 Length = 1650
Score = 35.4 bits (80), Expect = 3.2 Identities = 29/115 (25%), Positives = 46/115 (40%) Frame = +2
Query: 8 FCIAATYKSHLSLIRSNLCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHG 187 FC + + S+ + N C+G T SQ +C +G+ + Sbjct: 494 FCTGCIDEFYESIGQCNKCIGNCQTCPNSSQCHVCNTGYFVDK----------------- 536
Query: 188 RHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSS 352 +C C + C+SC GSA P + + K ++ P V+T TS CSS Sbjct: 537 MNCIACNSQCTSCSGSASECYSCKPGFSLIQNKCVS-CQTPCYTCVNT-TSTCSS 589
>tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena thermophila SB210 GN=TTHERM_01098980 PE=4 SV=1 Length = 3751
Score = 34.7 bits (78), Expect = 5.5 Identities = 19/82 (23%), Positives = 38/82 (46%) Frame = +2
Query: 176 SLHGRHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS 355 S G+ C QC ++CS+C GS + + P ++ + + + +TQT+ C+S Sbjct: 3198 SSDGKTCAQCDSSCSTCSGSGTKACNTCPANS---NLVAGQCLCAQGYYRNTQTNQCTSC 3254
Query: 356 *KLNRSCSCHEAPSFCFRSCGF 421 ++ C + + S G+ Sbjct: 3255 NTISNCLQCSSSTTCTQCSTGY 3276
>tr|Q1JTH9|Q1JTH9_TOXGO Hyothetical protein OS=Toxoplasma gondii RH GN=TgIa.0350c PE=4 SV=1 Length = 1821
Score = 34.7 bits (78), Expect = 5.5 Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 3/173 (1%) Frame = +2
Query: 8 FCIAATYKSHLSLIRSNLCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHG 187 FC ++++ S S+ C G + S C S S + +F+ S S Sbjct: 523 FCSSSSFSSSSFSCSSSACSGCSFSSCSSSSCSGCLFSSCSSSSWSGCSFSSCSSSSCSS 582
Query: 188 RHCRQC-YAAC--SSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS* 358 C C +++C SSC G + SS + + + + +F S +S+CS Sbjct: 583 SSCSGCSFSSCSSSSCSGCSSSSCSSSSWSGCSFSSCSS-SSCSGCSFSSCSSSSCS--- 638
Query: 359 KLNRSCSCHEAPSFCFRSCGFQRIXALCSSQAAFFFQSVDICSSSIRYGASAA 517 CS S + C F + S +F CSSS G S++ Sbjct: 639 ----GCSSSSCSSSSWSGCSFSSCSSSSCSGCSF-----SSCSSSSCSGCSSS 682
>tr|Q9NCQ8|Q9NCQ8_9CUCU Antifreeze protein 11 OS=Dendroides canadensis GN=afp-11 PE=2 SV=1 Length = 148
Score = 33.9 bits (76), Expect = 9.4 Identities = 19/69 (27%), Positives = 29/69 (42%) Frame = +2
Query: 185 GRHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS*KL 364 G CR C AAC+SCQ R + + + + A T++S C+++ Sbjct: 30 GSDCRSCTAACTSCQNCPNARSACTGSTVCHKAQTCTGSTGCYNAMTCTRSSECNNAQTC 89
Query: 365 NRSCSCHEA 391 S CH A Sbjct: 90 TGSHDCHNA 98
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