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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960541
Clone id TST39A01NGRL0007_L04
Library
Length 697
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_L04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGCAGATCTGTCACATGATGATGCAACAGCAGTTGAGTGTTTTGATCTGAAGATAAAAGT
GTGTTTTTGAAGGCTGAACATTTTAAGTCTAGGCTGTTCTCTTGGGGATAATGGAAGACC
CTGCGAAGATGGAGCTAAGGCACTGGGCCAATTTCGACCAGGCATACTTGAAAGATTTTT
TTAGAGATCAATCTACCACGAAGCTTACGCAAGTTACCGTGGAGAGGGATGCCGCATTTG
CTGAACGAGACAAAGCCCTGGCAGACAAGAAAATTGCATGCAATGAGCGAGATGCTGCTT
TACTGCAAAGAGATGTAGCATATGCGGACAGGAATACGGCATGGGTGGAGCGTGATAAAG
CTATGACAGCTCTCACAATTATCTGCAATAATGGTAATGACCCTGAAGGTGCTGCAAAGC
TCTTGCAAGTGGTCAACTTTGTAGCGAATCGTGCACATATGGGGAATAGCTTAATTTGTT
TGCCGGACCCAGTTGAGGAACCGAACAATCATGGGGAAGAAAGGTCCTCTCAGAGGCAGG
GCAAACAGCTGCTTAAGTCAGCAAAGAAAGAAACTCCCAAGAAACGCAAAGCAAGTGTGG
TGGCAAACCAGGAGAAGAAAGGTACCAAGTCTTCAGGGAAGAAACAAAAACAGCAGGAAG
GTCAGGGTAAGGCGGGGGAAATCCAAGCAGGATGAGG
■■Homology search results ■■ -
sp_hit_id Q05070
Definition sp|Q05070|Y4393_ANASP Uncharacterized protein alr4393 OS=Anabaena sp. (strain PCC 7120)
Align length 63
Score (bit) 35.0
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960541|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_L04, 5'
         (684 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05070|Y4393_ANASP Uncharacterized protein alr4393 OS=Anabaen...    35   0.37 
sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo ...    35   0.49 
sp|Q8TDM6|DLG5_HUMAN Disks large homolog 5 OS=Homo sapiens GN=DL...    33   1.8  
sp|Q80VP2|SPAT7_MOUSE Spermatogenesis-associated protein 7 homol...    32   4.1  

>sp|Q05070|Y4393_ANASP Uncharacterized protein alr4393 OS=Anabaena
           sp. (strain PCC 7120) GN=alr4393 PE=4 SV=2
          Length = 496

 Score = 35.0 bits (79), Expect = 0.37
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +2

Query: 197 QVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAMTALTIICN 376
           Q+  ER   +AE  KA+  +      R  A+ QRD   A+R  A  +RD+ ++ L  I  
Sbjct: 185 QLKTERRRLYAEAKKAIEQRDRELANRQQAIEQRDRELANRQQALQQRDQKISQLDKIIQ 244

Query: 377 NGN 385
           N N
Sbjct: 245 NRN 247


>sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo
            sapiens GN=MAP1A PE=1 SV=5
          Length = 2805

 Score = 34.7 bits (78), Expect = 0.49
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
 Frame = +2

Query: 170  RDQSTTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKA 349
            +D +  +  +    +D    E+DKAL  K     E+D AL Q+D A   ++ A   +DK 
Sbjct: 1418 KDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKD 1477

Query: 350  MTAL-TIICNNGNDPEGAAKLL-QVVNFVANRAHMGNSLICLPDPVEEPNNHGEERSSQR 523
            +     ++      PE   K L Q V  V ++A   +++  + D   E  +   E+  Q 
Sbjct: 1478 LEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKA-PEDTVAEMKDRDLEQTDKAPEQKHQA 1536

Query: 524  QGKQLLKSAKKETPKKRK 577
            Q ++   S KK+   ++K
Sbjct: 1537 QEQKDKVSEKKDQALEQK 1554



 Score = 33.1 bits (74), Expect = 1.4
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +2

Query: 209  ERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAM 352
            ++D A  ++DKAL  K     E+D AL Q+D    +++ A  ++D A+
Sbjct: 1417 QKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTAL 1464



 Score = 31.2 bits (69), Expect = 5.4
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +2

Query: 212  RDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAM 352
            ++ A  ++DKAL  K     ++D AL Q+D A   ++    E+DKA+
Sbjct: 1397 KNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKAL 1443



 Score = 30.4 bits (67), Expect = 9.1
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +2

Query: 212  RDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAM 352
            +D    ++DK L  K++    +D A+ Q+D A   +N A  ++DKA+
Sbjct: 1363 KDEVLQQKDKTLEHKEVV-EPKDTAIYQKDEALHVKNEAVKQQDKAL 1408


>sp|Q8TDM6|DLG5_HUMAN Disks large homolog 5 OS=Homo sapiens GN=DLG5
           PE=1 SV=4
          Length = 1919

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = +2

Query: 203 TVERDAAFAERDKALADK--KIACNERDAALLQRDVAYADRNTAWVERDKAMT---ALTI 367
           TV  DA  A ++  +  K  K  C E   AL + DVA   R+ A+ ERDK +    ++  
Sbjct: 483 TVTMDAGRANKEVEILRKQCKALCQELKEALQEADVAKCRRDWAFQERDKIVAERDSIRT 542

Query: 368 ICNN 379
           +C+N
Sbjct: 543 LCDN 546


>sp|Q80VP2|SPAT7_MOUSE Spermatogenesis-associated protein 7 homolog
           OS=Mus musculus GN=Spata7 PE=2 SV=1
          Length = 582

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 140 NWPSALAPSSQGLPLSPREQPRLKMFSLQKHTFIFRSKHS 21
           ++  +L PSS+GL LS  E  ++ M   QKH     S+HS
Sbjct: 144 SFSKSLIPSSEGLHLSLPESSKMLMSGTQKHASTSPSRHS 183
tr_hit_id B8LNW9
Definition tr|B8LNW9|B8LNW9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 175
Score (bit) 92.0
E-value 3.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960541|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_L04, 5'
         (684 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LNW9|B8LNW9_PICSI Putative uncharacterized protein OS=Picea...    92   3e-17
tr|Q5VSA8|Q5VSA8_ORYSJ Os06g0130600 protein OS=Oryza sativa subs...    71   6e-11
tr|A3B819|A3B819_ORYSJ Putative uncharacterized protein OS=Oryza...    71   6e-11
tr|B4FYC0|B4FYC0_MAIZE GAGA-binding transcriptional activator OS...    67   1e-09
tr|B8LRA8|B8LRA8_PICSI Putative uncharacterized protein OS=Picea...    64   9e-09
tr|A1E2T9|A1E2T9_MEDTR GAGA-binding transcriptional activator OS...    64   1e-08
tr|Q9FIG5|Q9FIG5_ARATH Gb|AAF18661.1 OS=Arabidopsis thaliana PE=...    63   2e-08
tr|Q8L999|Q8L999_ARATH Putative uncharacterized protein (GAGA-bi...    63   2e-08
tr|A8MQZ4|A8MQZ4_ARATH Uncharacterized protein At5g42520.2 OS=Ar...    63   2e-08
tr|A2Y8V8|A2Y8V8_ORYSI Putative uncharacterized protein OS=Oryza...    63   2e-08
tr|Q2PQR5|Q2PQR5_OLIPU GAGA-binding transcriptional activator OS...    62   3e-08
tr|B2Z456|B2Z456_VITVI GAGA-binding transcriptional activator BB...    62   3e-08
tr|Q9SVK1|Q9SVK1_ARATH Putative uncharacterized protein AT4g3891...    61   6e-08
tr|Q0PWL2|Q0PWL2_CARPT GAGA-binding transcriptional activator OS...    61   8e-08
tr|A5A510|A5A510_BRARP GAGA-binding transcriptional activator OS...    61   8e-08
tr|B2Z458|B2Z458_VITVI GAGA-binding transcriptional activator BB...    59   4e-07
tr|A7NT03|A7NT03_VITVI Chromosome chr18 scaffold_1, whole genome...    55   4e-06
tr|A9PBI4|A9PBI4_POPTR Putative uncharacterized protein OS=Popul...    54   9e-06
tr|A8D193|A8D193_POPTR GAGA-motif binding transcriptional activa...    54   9e-06
tr|Q8S8C6|Q8S8C6_ARATH Expressed protein (Putative uncharacteriz...    53   2e-05
tr|Q6U1M9|Q6U1M9_ARATH Basic pentacysteine 4 OS=Arabidopsis thal...    53   2e-05
tr|A9PJQ5|A9PJQ5_POPJC Putative uncharacterized protein OS=Popul...    52   3e-05
tr|B6PY95|B6PY95_BRAFL Putative uncharacterized protein OS=Branc...    50   1e-04
tr|B6LKX6|B6LKX6_BRAFL Putative uncharacterized protein OS=Branc...    48   5e-04
tr|Q4V9E6|Q4V9E6_DANRE Zgc:113426 OS=Danio rerio GN=zgc:113426 P...    40   0.11 
tr|B5DHJ7|B5DHJ7_DROPS GA25229 OS=Drosophila pseudoobscura pseud...    35   0.15 
tr|A7H6K5|A7H6K5_ANADF Methyltransferase type 11 OS=Anaeromyxoba...    40   0.18 
tr|Q4CT56|Q4CT56_TRYCR Putative uncharacterized protein (Fragmen...    39   0.31 
tr|B4GK38|B4GK38_DROPE GL26002 OS=Drosophila persimilis GN=GL260...    35   0.38 
tr|A8KB19|A8KB19_DANRE Zgc:171459 protein OS=Danio rerio GN=zgc:...    38   0.53 

>tr|B8LNW9|B8LNW9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 313

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
 Frame = +2

Query: 98  MEDPAKMELRHWANFDQAYLKDFFRDQSTTKLTQVTVERDAAFAERDKALADKKIACNER 277
           M+D  ++++RHW   +Q+      +D    K   V  ERDAA  ER+ A ++KK A  E+
Sbjct: 1   MDDDGRLDIRHWDTLEQSV-----KDHPGLKFMSVLAERDAAILERNTAFSEKKAAFAEK 55

Query: 278 DAALLQRDVAYADRNTAWVERDKAMTALTIICNNGNDPEGA--------AKLLQVV---- 421
           + A+ QRDVAYADRNTA +ERD A  AL    + G + + +        AK+LQV+    
Sbjct: 56  ETAIFQRDVAYADRNTAILERDAAAAALDYARDGGWNGQRSLSCGTLSNAKILQVLAENP 115

Query: 422 NFVANRAHMGNSL-ICLPDPV-EEPNNHGEERSSQRQGKQLLKSAKKETPKKRKA 580
            F A        + +  P PV E P     +++++R  K+  K  +KE+P KRK+
Sbjct: 116 TFSAREYQTMRPINVAFPAPVLEAPPYEEPQKTAKRTSKK--KDGEKESPSKRKS 168


>tr|Q5VSA8|Q5VSA8_ORYSJ Os06g0130600 protein OS=Oryza sativa subsp.
           japonica GN=P0493C11.7 PE=2 SV=1
          Length = 331

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
 Frame = +2

Query: 170 RDQSTTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKA 349
           +D  +  L  +  +RD A  ERD ALA+KK A  ERD A  QRD A A+RN A VERD A
Sbjct: 34  KDHQSMNLLALMNDRDNAIRERDHALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNA 93

Query: 350 MTALTII------CNNGND-PEGAAKLLQVVNFVANRAHMGNSLICLPDPVEEPNNHGEE 508
           + AL +        NNGN  P+G+    + ++     +H  +S + L D    P +H  E
Sbjct: 94  LAALELARTNGLNMNNGNGFPQGSLSGSKNIHHHDQLSHAQSSPLQLAD---SPYDHARE 150

Query: 509 R------------SSQRQGKQLLKSAKKETPKKRKASVV 589
                         S  + K+  K++ + +P KR + V+
Sbjct: 151 MHISEAYPISTAPGSAGKAKRPKKNSSQASPLKRPSGVL 189


>tr|A3B819|A3B819_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_019191 PE=4 SV=1
          Length = 307

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
 Frame = +2

Query: 170 RDQSTTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKA 349
           +D  +  L  +  +RD A  ERD ALA+KK A  ERD A  QRD A A+RN A VERD A
Sbjct: 34  KDHQSMNLLALMNDRDNAIRERDHALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNA 93

Query: 350 MTALTII------CNNGND-PEGAAKLLQVVNFVANRAHMGNSLICLPDPVEEPNNHGEE 508
           + AL +        NNGN  P+G+    + ++     +H  +S + L D    P +H  E
Sbjct: 94  LAALELARTNGLNMNNGNGFPQGSLSGSKNIHHHDQLSHAQSSPLQLAD---SPYDHARE 150

Query: 509 R------------SSQRQGKQLLKSAKKETPKKRKASVV 589
                         S  + K+  K++ + +P KR + V+
Sbjct: 151 MHISEAYPISTAPGSAGKAKRPKKNSSQASPLKRPSGVL 189


>tr|B4FYC0|B4FYC0_MAIZE GAGA-binding transcriptional activator
           OS=Zea mays PE=2 SV=1
          Length = 330

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = +2

Query: 170 RDQSTTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKA 349
           +D  +  L  +  E+D+A  ERD ALA+KK A  ERD A  QRD A A+RN A VERD A
Sbjct: 32  KDHQSMNLLALMNEKDSAIRERDHALAEKKAAIAERDMAFAQRDAAMAERNAAIVERDNA 91

Query: 350 MTALTIICNNG 382
           + AL +   NG
Sbjct: 92  LAALELARTNG 102


>tr|B8LRA8|B8LRA8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 334

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = +2

Query: 128 HWANFDQAYLKDFFRDQSTTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVA 307
           H A  D+   +   +D +  +L     ERDA   ERDKA+A+KK+A  E++AA  QRD A
Sbjct: 10  HPALNDEPLDEKCLKDYAMLRLISAKTERDAVIRERDKAIAEKKVAIAEKEAAYAQRDAA 69

Query: 308 YADRNTAWVERDKAMTAL 361
           +A R+ A +ERD A  AL
Sbjct: 70  FAQRDEAIMERDAAFAAL 87



 Score = 40.0 bits (92), Expect = 0.14
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +2

Query: 170 RDQSTTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAW 331
           RD++  +      E++AA+A+RD A A +  A  ERDAA    + A  +RN  W
Sbjct: 45  RDKAIAEKKVAIAEKEAAYAQRDAAFAQRDEAIMERDAAFAALENARDERNRGW 98


>tr|A1E2T9|A1E2T9_MEDTR GAGA-binding transcriptional activator
           OS=Medicago truncatula GN=BBR/BPC6 PE=2 SV=1
          Length = 318

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 53/157 (33%), Positives = 72/157 (45%), Gaps = 24/157 (15%)
 Frame = +2

Query: 179 STTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAMTA 358
           S  ++  +  ERDAA  ER+ AL++KK A  ERD A LQRD A A+RN A +ERD A+  
Sbjct: 10  SMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERDNAIAT 69

Query: 359 L----TIICNNG--NDPEGAA---------KLLQVVNFVAN---------RAHMGNSLIC 466
           L      + N G  + P G            L Q VN + N           H  ++L  
Sbjct: 70  LQFRENALANGGMSSCPPGCQISRGVKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALPA 129

Query: 467 LPDPVEEPNNHGEERSSQRQGKQLLKSAKKETPKKRK 577
            P  +E        R ++R  +    S  K+TPK RK
Sbjct: 130 APVSLEVGK---PPRRAKRPKESKSDSPNKKTPKSRK 163


>tr|Q9FIG5|Q9FIG5_ARATH Gb|AAF18661.1 OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 301

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +2

Query: 179 STTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAMTA 358
           S  ++  +  ERDAA  ER+ A+++KK A  ERD A LQRD A A+RN A +ERD A+TA
Sbjct: 27  SMKQVMSIIAERDAAIQERNLAISEKKAAVAERDMAFLQRDTAIAERNNAIMERDSALTA 86

Query: 359 L 361
           L
Sbjct: 87  L 87


>tr|Q8L999|Q8L999_ARATH Putative uncharacterized protein
           (GAGA-binding transcriptional activator) (Putative
           uncharacterized protein At5g42520) (At5g42520) (Basic
           pentacysteine 6) OS=Arabidopsis thaliana GN=BBR/BPC6
           PE=2 SV=1
          Length = 342

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +2

Query: 179 STTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAMTA 358
           S  ++  +  ERDAA  ER+ A+++KK A  ERD A LQRD A A+RN A +ERD A+TA
Sbjct: 27  SMKQVMSIIAERDAAIQERNLAISEKKAAVAERDMAFLQRDTAIAERNNAIMERDSALTA 86

Query: 359 L 361
           L
Sbjct: 87  L 87


>tr|A8MQZ4|A8MQZ4_ARATH Uncharacterized protein At5g42520.2
           OS=Arabidopsis thaliana GN=At5g42520 PE=4 SV=1
          Length = 338

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +2

Query: 179 STTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKAMTA 358
           S  ++  +  ERDAA  ER+ A+++KK A  ERD A LQRD A A+RN A +ERD A+TA
Sbjct: 23  SMKQVMSIIAERDAAIQERNLAISEKKAAVAERDMAFLQRDTAIAERNNAIMERDSALTA 82

Query: 359 L 361
           L
Sbjct: 83  L 83


>tr|A2Y8V8|A2Y8V8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21488 PE=4 SV=1
          Length = 274

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = +2

Query: 170 RDQSTTKLTQVTVERDAAFAERDKALADKKIACNERDAALLQRDVAYADRNTAWVERDKA 349
           +D  +  L  +  +RD A  ERD ALA+KK A  ERD A  QRD A A+RN A VERD A
Sbjct: 34  KDHQSMNLLALMNDRDNAIRERDHALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNA 93

Query: 350 MTAL-TIICNNGNDPEGAAK 406
           + AL +I   N +   G AK
Sbjct: 94  LAALESIPYLNSSRSAGKAK 113