DK960542 |
Clone id |
TST39A01NGRL0007_L05 |
Library |
TST39 |
Length |
602 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_L05. 5' end sequence. |
Accession |
DK960542 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2683Contig1 |
Sequence |
GTGAGCAAAAATGTGAAGGGGATGATCAGGCGTGCTACAGCTCTCTGTTCGTTCGCGCGG GCACTCTCATCAACAAGGTCGCATTTGCCTGCATTTTCGCCATCGCCCTCATCACGGCTT TCTAGTTCCGATGAGGAGATCAACCACAGGGTAAGGGGTTCCCTTCTGCATAACTTGAGC AAGCGCAATCAAAGTGCTCAGCAGAATGCTTTTTCGAACTTGCCTTCTCCCTCTTCATCG TCTCTTGTCTCTGAGGATGAGGACATCCCTACACAGAGTAGGGTTTTGCGACCCCTTCCT CCCACTAACACCATCTCTGTGTTTTGGGATCTTGATAATAAGCCCCCGCATTCAGTCCCT CCTTTTGAAGCTGCCATCCGCCTCCGGGAGGTCGCATGCAGCTTCGGTCGCCTGGTTGAC ATGGTGGCATATGCAAACAGACATGCGTTCTCTTACCTCCCTGCTTGGGTCAAAGAAGAG AGGCGCAATCGTAAGGAATTGGACAGACTGGAGGTAAGTGGTCTTGTTGTACCTGGGGAA CCATATGTATGTAGCTATTGTGGGCGCCGATGCACAACCAATATAGCTTTGAAAAAGCAC TT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9D2D7 |
Definition |
sp|Q9D2D7|ZN687_MOUSE Zinc finger protein 687 OS=Mus musculus |
Align length |
28 |
Score (bit) |
32.3 |
E-value |
1.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RHS4 |
Definition |
tr|A9RHS4|A9RHS4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
96 |
Score (bit) |
149.0 |
E-value |
1.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960542|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_L05, 5' (602 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RHS4|A9RHS4_PHYPA Predicted protein (Fragment) OS=Physcomit... 149 1e-34 tr|A9TW77|A9TW77_PHYPA Predicted protein (Fragment) OS=Physcomit... 138 3e-31 tr|A9SMQ2|A9SMQ2_PHYPA Predicted protein (Fragment) OS=Physcomit... 131 3e-29 tr|A9NVW0|A9NVW0_PICSI Putative uncharacterized protein OS=Picea... 126 8e-28 tr|Q9FJ91|Q9FJ91_ARATH Dbj|BAA78737.1 (AT5g52010/MSG15_9) OS=Ara... 124 3e-27 tr|Q8LEI1|Q8LEI1_ARATH Putative uncharacterized protein OS=Arabi... 124 3e-27 tr|A7NU01|A7NU01_VITVI Chromosome chr18 scaffold_1, whole genome... 121 4e-26 tr|A7QVA6|A7QVA6_VITVI Chromosome chr2 scaffold_187, whole genom... 119 1e-25 tr|A7QYU0|A7QYU0_VITVI Chromosome undetermined scaffold_254, who... 118 2e-25 tr|Q9STI7|Q9STI7_ARATH Putative uncharacterized protein AT4g1224... 118 3e-25 tr|Q5VRR3|Q5VRR3_ORYSJ Zinc finger protein-like (Putative unchar... 110 6e-23 tr|Q0DE96|Q0DE96_ORYSJ Os06g0166200 protein (Fragment) OS=Oryza ... 110 6e-23 tr|A2Y9R1|A2Y9R1_ORYSI Putative uncharacterized protein OS=Oryza... 110 6e-23 tr|B6TRZ6|B6TRZ6_MAIZE Zinc finger, C2H2 type family protein OS=... 110 8e-23 tr|A7EMM7|A7EMM7_SCLS1 Putative uncharacterized protein OS=Scler... 72 2e-11 tr|Q7X666|Q7X666_ORYSJ Os04g0464600 protein OS=Oryza sativa subs... 43 0.012 tr|Q01JD8|Q01JD8_ORYSA OSIGBa0130P02.1 protein OS=Oryza sativa G... 43 0.012 tr|A2XUD5|A2XUD5_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.016 tr|A6RW66|A6RW66_BOTFB Putative uncharacterized protein OS=Botry... 40 0.080 tr|A2Y6K3|A2Y6K3_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.40 tr|Q75II1|Q75II1_ORYSJ Os05g0518200 protein OS=Oryza sativa subs... 38 0.52 tr|A3B5W6|A3B5W6_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.52 tr|Q4RLE3|Q4RLE3_TETNG Chromosome undetermined SCAF15021, whole ... 36 2.0 tr|B6NHZ1|B6NHZ1_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6 tr|Q4REH0|Q4REH0_TETNG Chromosome 10 SCAF15123, whole genome sho... 35 4.4 tr|Q8YB20|Q8YB20_BRUME FLAGELLAR PROTEIN FLIL OS=Brucella melite... 34 7.5 tr|Q8FXC1|Q8FXC1_BRUSU Flagellar protein FliL, putative OS=Bruce... 34 7.5 tr|Q579T5|Q579T5_BRUAB Hypothetical FliL, flagellar protein OS=B... 34 7.5 tr|Q2YJ66|Q2YJ66_BRUA2 Flagellar basal body-associated protein F... 34 7.5 tr|B2SCW3|B2SCW3_BRUA1 Flagellar basal body-associated protein F... 34 7.5
>tr|A9RHS4|A9RHS4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_24318 PE=4 SV=1 Length = 298
Score = 149 bits (376), Expect = 1e-34 Identities = 62/96 (64%), Positives = 81/96 (84%) Frame = +1
Query: 313 ISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEERRNR 492 ++VFWDLDNKPP +VPP++AA+RL E+A FG +VD+ AYANR+AF+YLP WVKE+R+ R Sbjct: 2 VAVFWDLDNKPPRNVPPYDAAVRLIEMAAGFGEVVDVAAYANRYAFAYLPLWVKEQRKER 61
Query: 493 KELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 ++LDRLE +G++ P EPYVC YCGR+C TN LKKH Sbjct: 62 RQLDRLERAGIIKPSEPYVCGYCGRKCKTNEKLKKH 97
>tr|A9TW77|A9TW77_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_4515 PE=4 SV=1 Length = 242
Score = 138 bits (347), Expect = 3e-31 Identities = 59/97 (60%), Positives = 76/97 (78%) Frame = +1
Query: 310 TISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEERRN 489 T+ VFWDLDNKPP+ V P++AAIRLR++A FG +VDMVAYANRHAF Y+P WV+++R+ Sbjct: 4 TVGVFWDLDNKPPNGVMPYKAAIRLRDLAGEFGLVVDMVAYANRHAFIYVPQWVRDQRKE 63
Query: 490 RKELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 RK L+ LEV G+ P +PY C YCGR+C T LK+H Sbjct: 64 RKRLNSLEVQGIATPYQPYRCQYCGRKCDTYFKLKRH 100
>tr|A9SMQ2|A9SMQ2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_15899 PE=4 SV=1 Length = 257
Score = 131 bits (330), Expect = 3e-29 Identities = 56/96 (58%), Positives = 72/96 (75%) Frame = +1
Query: 313 ISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEERRNR 492 + VFWDLDNKPP V P++AAI LR++A FG +VDMVAYAN HAF+Y+P W+++ER+ R Sbjct: 1 VGVFWDLDNKPPKGVAPYKAAISLRDLASEFGLVVDMVAYANHHAFTYVPQWIRDERQER 60
Query: 493 KELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 K L LE G V P EPY+C +CGR+C T + L KH Sbjct: 61 KRLSVLEEQGAVKPEEPYICQFCGRKCQTYLKLLKH 96
>tr|A9NVW0|A9NVW0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 393
Score = 126 bits (317), Expect = 8e-28 Identities = 55/96 (57%), Positives = 74/96 (77%) Frame = +1
Query: 313 ISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEERRNR 492 +++FWDLDNKPP+SVPP++AA+RLR V +FG ++ MVAYANRHAFS++P V+ ER+ R Sbjct: 50 VAIFWDLDNKPPNSVPPYDAALRLRSVGRAFGFVIQMVAYANRHAFSFVPPRVRIERQQR 109
Query: 493 KELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 K LD LE GL+ P EPY+C CG + T+I +KH Sbjct: 110 KTLDILEARGLIQPEEPYICEVCGHKFKTHIKFQKH 145
>tr|Q9FJ91|Q9FJ91_ARATH Dbj|BAA78737.1 (AT5g52010/MSG15_9) OS=Arabidopsis thaliana GN=At5g52010 PE=2 SV=1 Length = 396
Score = 124 bits (312), Expect = 3e-27 Identities = 58/101 (57%), Positives = 71/101 (70%) Frame = +1
Query: 298 PPTNTISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKE 477 P + V WDLDNKPP PP+EAA LR+VA GR+V++ AYANRHAF +LP WV E Sbjct: 71 PKEKKVVVLWDLDNKPPRG-PPYEAATALRKVAEKLGRVVEISAYANRHAFIHLPHWVVE 129
Query: 478 ERRNRKELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 ERR R+ LD +E G V P +PY+C CGR+C TN+ LKKH Sbjct: 130 ERRERRNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKH 170
>tr|Q8LEI1|Q8LEI1_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 336
Score = 124 bits (312), Expect = 3e-27 Identities = 58/101 (57%), Positives = 71/101 (70%) Frame = +1
Query: 298 PPTNTISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKE 477 P + V WDLDNKPP PP+EAA LR+VA GR+V++ AYANRHAF +LP WV E Sbjct: 11 PKEKKVVVLWDLDNKPPRG-PPYEAATALRKVAEKLGRVVEISAYANRHAFIHLPHWVVE 69
Query: 478 ERRNRKELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 ERR R+ LD +E G V P +PY+C CGR+C TN+ LKKH Sbjct: 70 ERRERRNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKH 110
>tr|A7NU01|A7NU01_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014863001 PE=4 SV=1 Length = 489
Score = 121 bits (303), Expect = 4e-26 Identities = 55/96 (57%), Positives = 67/96 (69%) Frame = +1
Query: 313 ISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEERRNR 492 + V WDLDNKPP PP+ AA L E+A FG +VD+ AYANRHAF +LP WV EER R Sbjct: 16 VVVLWDLDNKPPRG-PPYAAATALIELAQRFGDIVDISAYANRHAFVHLPQWVLEERHER 74
Query: 493 KELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 + +D LE G+ P EPY+C CGR+C TN+ LKKH Sbjct: 75 RRMDFLERKGITTPAEPYICGVCGRKCRTNLDLKKH 110
>tr|A7QVA6|A7QVA6_VITVI Chromosome chr2 scaffold_187, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007261001 PE=4 SV=1 Length = 2880
Score = 119 bits (298), Expect = 1e-25 Identities = 55/96 (57%), Positives = 72/96 (75%) Frame = +1
Query: 313 ISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEERRNR 492 +++FWDLDNKPP+S PP++AA+RL+ VA SFG + MVAYANRHAFSY+P+ V+E+R+ R Sbjct: 42 VAIFWDLDNKPPNSYPPYDAAVRLKAVASSFGAVRYMVAYANRHAFSYVPSAVREQRKER 101
Query: 493 KELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 K L+ LE G+V EPY+C CGRR N L H Sbjct: 102 KLLNHLENRGVVARVEPYLCRVCGRRFYNNEKLINH 137
>tr|A7QYU0|A7QYU0_VITVI Chromosome undetermined scaffold_254, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010327001 PE=4 SV=1 Length = 269
Score = 118 bits (296), Expect = 2e-25 Identities = 55/96 (57%), Positives = 72/96 (75%) Frame = +1
Query: 313 ISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEERRNR 492 +++FWDLDNKPP+S PP++AA+RL+ VA SFG + MVAYANRHAFSY+P+ V+E+R+ R Sbjct: 42 VAIFWDLDNKPPNSYPPYDAAVRLKAVASSFGVVRYMVAYANRHAFSYVPSAVREQRKER 101
Query: 493 KELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 K L+ LE G+V EPY+C CGRR N L H Sbjct: 102 KLLNHLENRGVVARVEPYLCRVCGRRFYNNEKLINH 137
>tr|Q9STI7|Q9STI7_ARATH Putative uncharacterized protein AT4g12240 OS=Arabidopsis thaliana GN=AT4g12240 PE=2 SV=1 Length = 364
Score = 118 bits (295), Expect = 3e-25 Identities = 56/100 (56%), Positives = 71/100 (71%) Frame = +1
Query: 301 PTNTISVFWDLDNKPPHSVPPFEAAIRLREVACSFGRLVDMVAYANRHAFSYLPAWVKEE 480 P + V+WDLDNKPP S PP++AA++LR A SFG + M+AYANRHAFSY+P V+E+ Sbjct: 36 PKIRVGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQ 95
Query: 481 RRNRKELDRLEVSGLVVPGEPYVCSYCGRRCTTNIALKKH 600 R++RK L++LE GLV P EPY C C RR TN L H Sbjct: 96 RKDRKLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINH 135
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