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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960552
Clone id TST39A01NGRL0007_L17
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_L17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GAGGATCAATAAGAAGAAAGAGAATAAGAAGCCTTGGCTGCCGTCTCTGCTTCTACTCTC
TCCGCCTCGGCGGCGGCAACTGCCCCCGCTGCTTCACTGAAGTCGGAATTCTGTGGCGTT
CACGTGCAGGGCATCCCCTCCCGCTCTCCCAAGCTATCCGCCCGCTCCCTCTCAATCGAA
GCCCGTGGTGTGCAGAAGATCTGGACCCAGAGTCCGCTTGGGACCATCCCGCGAGCCCTG
TTCTGGGGAAACCGGGATGCGTCTGGTCTCATGGCTAAGGGAAAAGGAGTCTACTGATAT
ACCAGAGAAGTATGGTGCTTATGTCTTATGGATGCAGACCTATATGTATCCCGGACGACT
GGTCAACTTCAGGTGATAACTATGCTGCAGGTCCAACTGGATTGGCTATCTCGGCTGTTA
CCCTCGGCGCTATCTTGATGGGTGGTGCCCTCTTAGTGTACAGCACCTGTGCCCTTGCTC
AATGATTGCTTGTGTATGTTAAAGATGTGAATCCTGACTTCTGACACACTATG
■■Homology search results ■■ -
sp_hit_id P06183
Definition sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum
Align length 51
Score (bit) 63.5
E-value 3.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960552|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_L17, 5'
         (533 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloropl...    64   3e-15
sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloropl...    64   3e-14
sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloropl...    62   4e-13
sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloropl...    64   3e-10
sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloropl...    64   6e-10
sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloropl...    63   8e-10
sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloropl...    60   9e-09
sp|Q2IHR0|OXAA_ANADE Inner membrane protein oxaA OS=Anaeromyxoba...    32   2.5  
sp|Q7U8U2|GPMI_SYNPX 2,3-bisphosphoglycerate-independent phospho...    30   9.5  
sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago...    30   9.5  

>sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide,
           chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1
          Length = 138

 Score = 63.5 bits (153), Expect(2) = 3e-15
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS SGD Y  G TGLAI AVTL  IL GGALLVY+T ALAQ
Sbjct: 88  GYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALAQ 138



 Score = 38.5 bits (88), Expect(2) = 3e-15
 Identities = 24/59 (40%), Positives = 31/59 (52%)
 Frame = +1

Query: 124 VQGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY*Y 300
           V+G+PS +   S+ S  + A GV+K+ T  P G           DASG   KGKGVY Y
Sbjct: 22  VKGLPSLAR--SSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQY 78


>sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide,
           chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1
          Length = 141

 Score = 64.3 bits (155), Expect(2) = 3e-14
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS SGD Y  G TGLAI AVTL  IL GGALLVY+T ALAQ
Sbjct: 91  GYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 141



 Score = 34.7 bits (78), Expect(2) = 3e-14
 Identities = 23/56 (41%), Positives = 28/56 (50%)
 Frame = +1

Query: 127 QGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY 294
           +G+PS + + S  S  I A GV+KI T  P G           DASG   KG GVY
Sbjct: 25  RGLPSLT-RASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGRKGKGYGVY 79


>sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide,
           chloroplastic OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1
          Length = 140

 Score = 62.4 bits (150), Expect(2) = 4e-13
 Identities = 33/51 (64%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   ++WS SGD Y  G TGLAI AVTL  IL GGALLVY+T ALAQ
Sbjct: 90  GYSPIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 140



 Score = 32.7 bits (73), Expect(2) = 4e-13
 Identities = 23/58 (39%), Positives = 28/58 (48%)
 Frame = +1

Query: 127 QGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY*Y 300
           +G+PS +   +  S  I A GV+KI T  P G           DASG   KG GVY Y
Sbjct: 25  RGLPSLTR--ARPSFKIVASGVKKIKTDKPFGINGSMDLRDGVDASGRKGKGYGVYKY 80


>sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide,
           chloroplastic OS=Hordeum vulgare GN=PSBR PE=3 SV=1
          Length = 138

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALA 479
           G  PI  P++WS SGD Y  G TGL + AVTL  IL+GGALLVYST ALA
Sbjct: 88  GYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGGALLVYSTSALA 137



 Score = 37.4 bits (85), Expect = 0.046
 Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 26/102 (25%)
 Frame = +1

Query: 136 PSRSPKL----------SAR-SLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKG 282
           PS SP L          SAR SL I A+  +K+ T  P G      F    DASG +AKG
Sbjct: 13  PSSSPLLQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVAFKEGVDASGRVAKG 72

Query: 283 KGVY---------------*YTREVWCLCLMDADLYVSRTTG 363
           KGVY                YT E W       D+YV   TG
Sbjct: 73  KGVYQFADKYGANVDGYSPIYTPEEWS---PSGDVYVGGKTG 111


>sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide,
           chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1
          Length = 136

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   DDWS SGD Y  G TGLAI AVTL  IL GGALLV++T ALAQ
Sbjct: 86  GYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTSALAQ 136



 Score = 38.5 bits (88), Expect = 0.020
 Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
 Frame = +1

Query: 124 VQGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY--- 294
           V+G+PS +   S+ S  ++A GV+K+ T  P G           DASG   KGKGVY   
Sbjct: 20  VKGLPSLAR--SSSSFRVQASGVKKLKTDKPYGINGSMSLRDGVDASGRKQKGKGVYQFV 77

Query: 295 ------------*YTREVWCLCLMDADLYVSRTTG 363
                        Y  + W       D+YV  TTG
Sbjct: 78  DKYGANVDGYSPIYNTDDWS---PSGDVYVGGTTG 109


>sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide,
           chloroplastic OS=Solanum lycopersicum GN=PSBR PE=2 SV=1
          Length = 138

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS SGD Y  G TGLAI AVTL  IL GGALLVY+T ALAQ
Sbjct: 88  GYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALAQ 138



 Score = 39.7 bits (91), Expect = 0.009
 Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 16/108 (14%)
 Frame = +1

Query: 118 VHVQGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY- 294
           + V+G+PS +   S+ S  + A GV+K+ T  P G           DASG   KGKGVY 
Sbjct: 20  ISVKGLPSLTR--SSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQ 77

Query: 295 --------------*YTREVWCLCLMDADLYVSRTTG-QLQVITMLQV 393
                          Y  + W       D+YV  TTG  +  +T+L +
Sbjct: 78  YVDKYGANVDGYSPIYNTDEWS---PSGDVYVGGTTGLAIWAVTLLGI 122


>sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide,
           chloroplastic OS=Spinacia oleracea GN=PSBR PE=2 SV=1
          Length = 140

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   ++W+ +GD YA G TGL I AVTL  +L GGALLVY+T ALAQ
Sbjct: 90  GYSPIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGLLAGGALLVYNTSALAQ 140


>sp|Q2IHR0|OXAA_ANADE Inner membrane protein oxaA
           OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=oxaA
           PE=3 SV=1
          Length = 545

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -2

Query: 469 QVLYTKRAPPIKIAPRVTAEIANPVGPAA 383
           QV++ K+ PP K AP   AE+A P  PAA
Sbjct: 23  QVIFPKKTPP-KPAPTPAAEVAKPAAPAA 50


>sp|Q7U8U2|GPMI_SYNPX 2,3-bisphosphoglycerate-independent
           phosphoglycerate mutase OS=Synechococcus sp. (strain
           WH8102) GN=gpmI PE=3 SV=1
          Length = 543

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 310 VWCLCLMDADLYVSRTTGQLQVITMLQVQLD 402
           V  LCL D D +  RTT +L V+T  QV+ D
Sbjct: 276 VQTLCLDDFDGFERRTTPKLDVVTFTQVEQD 306


>sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago
           maydis GN=DED1 PE=3 SV=1
          Length = 672

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
 Frame = -2

Query: 253 GFPRTGLAGWSQADSG----SRSSAHHGLRLRGSGRIAWESGRGCPARERHRI 107
           G PR G  GW    SG    +R+   +G   R  G   W+ G+  P     R+
Sbjct: 97  GAPRGGAGGWDAPSSGGYGGARNGGGYGGGARNDGFGQWKDGKHVPGPHNPRL 149
tr_hit_id A9PIM0
Definition tr|A9PIM0|A9PIM0_POPJC Putative uncharacterized protein OS=Populus jackii
Align length 51
Score (bit) 65.5
E-value 6.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960552|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_L17, 5'
         (533 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PIM0|A9PIM0_POPJC Putative uncharacterized protein OS=Popul...    65   6e-17
tr|A9PHU8|A9PHU8_POPTR Putative uncharacterized protein OS=Popul...    64   2e-16
tr|A9PH94|A9PH94_POPTR Putative uncharacterized protein OS=Popul...    64   3e-16
tr|A9PJW8|A9PJW8_POPJC Putative uncharacterized protein OS=Popul...    64   9e-15
tr|A9NK29|A9NK29_PICSI Putative uncharacterized protein OS=Picea...    56   4e-14
tr|A9S7M9|A9S7M9_PHYPA Predicted protein OS=Physcomitrella paten...    58   9e-14
tr|Q6V7X5|Q6V7X5_TRIPR 10 kDa photosystem II polypeptide OS=Trif...    64   1e-13
tr|A1YN01|A1YN01_BRACM Photosystem II 10kDa polytpeptide OS=Bras...    64   3e-13
tr|Q84XP6|Q84XP6_BRARP Photosystem II 10kDa polypeptide (Fragmen...    64   3e-13
tr|A1Z271|A1Z271_BRAJU PSII 10Kd peptide OS=Brassica juncea PE=2...    63   6e-13
tr|A1XX43|A1XX43_9MAGN Chloroplast photosystem II light-inducibl...    59   8e-13
tr|Q8H4P7|Q8H4P7_ORYSJ Os07g0147500 protein OS=Oryza sativa subs...    60   2e-12
tr|B8B7A9|B8B7A9_ORYSI Putative uncharacterized protein OS=Oryza...    60   2e-12
tr|A9RLG5|A9RLG5_PHYPA Predicted protein OS=Physcomitrella paten...    54   4e-12
tr|Q0WWI7|Q0WWI7_ARATH PSII-R protein OS=Arabidopsis thaliana GN...    62   5e-12
tr|Q2PXN6|Q2PXN6_ARAHY Chloroplast photosystem II 10 kDa protein...    59   5e-12
tr|A9PAP8|A9PAP8_POPTR Putative uncharacterized protein OS=Popul...    61   1e-11
tr|A9S7M8|A9S7M8_PHYPA Predicted protein OS=Physcomitrella paten...    55   3e-11
tr|A9S1D9|A9S1D9_PHYPA Predicted protein OS=Physcomitrella paten...    55   5e-11
tr|A3BGK2|A3BGK2_ORYSJ Putative uncharacterized protein OS=Oryza...    60   2e-10
tr|B8B7B0|B8B7B0_ORYSI Putative uncharacterized protein OS=Oryza...    60   2e-10
tr|Q6ZF71|Q6ZF71_ORYSJ Putative Photosystem II 10 kDa polypeptid...    60   2e-10
tr|B4YYB9|B4YYB9_THEHA ST244 OS=Thellungiella halophila PE=2 SV=1      52   2e-09
tr|Q8GV53|Q8GV53_9LILI Photosystem II 10 kDa protein OS=Xerophyt...    65   2e-09
tr|A5AWT3|A5AWT3_VITVI Putative uncharacterized protein (Chromos...    65   2e-09
tr|A8VIE2|A8VIE2_PROJU Chloroplast photosystem II PsbR OS=Prosop...    64   5e-09
tr|A4ZGB4|A4ZGB4_AGATE Chloroplast photosystem II 10 kDa protein...    64   6e-09
tr|Q6XW17|Q6XW17_WHEAT Photosystem II polypeptide (Fragment) OS=...    63   1e-08
tr|B2BJH0|B2BJH0_OLEEU Photosystem II 10 kDa polypeptide (Fragme...    58   2e-08
tr|A9XNP5|A9XNP5_9MYRT Photosystem II 10 kDa polypeptide (Fragme...    49   2e-08

>tr|A9PIM0|A9PIM0_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 137

 Score = 65.5 bits (158), Expect(2) = 6e-17
 Identities = 35/51 (68%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS SGD YA G TGL I AVTL  IL GGALLVYST ALAQ
Sbjct: 87  GYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALAQ 137



 Score = 46.2 bits (108), Expect(2) = 6e-17
 Identities = 27/51 (52%), Positives = 29/51 (56%)
 Frame = +1

Query: 148 PKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY*Y 300
           P LS RS  IEA GV+KI T +P GT          DASG   KGKGVY Y
Sbjct: 27  PTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQY 77


>tr|A9PHU8|A9PHU8_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 137

 Score = 64.3 bits (155), Expect(2) = 2e-16
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS SGD YA G TGL I AVTL  IL GGALLVY+T ALAQ
Sbjct: 87  GYSPIYNADEWSPSGDVYAGGKTGLLIWAVTLAGILAGGALLVYTTSALAQ 137



 Score = 45.4 bits (106), Expect(2) = 2e-16
 Identities = 26/51 (50%), Positives = 29/51 (56%)
 Frame = +1

Query: 148 PKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY*Y 300
           P LS RS  IEA GV+KI T +P GT          DASG   +GKGVY Y
Sbjct: 27  PTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLRNGLDASGRKPRGKGVYQY 77


>tr|A9PH94|A9PH94_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 137

 Score = 64.3 bits (155), Expect(2) = 3e-16
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS +GD YA G TGL I AVTL  IL GGALLVYST ALAQ
Sbjct: 87  GYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALAQ 137



 Score = 45.1 bits (105), Expect(2) = 3e-16
 Identities = 26/51 (50%), Positives = 29/51 (56%)
 Frame = +1

Query: 148 PKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY*Y 300
           P LS R+  IEA GV+KI T +P GT          DASG   KGKGVY Y
Sbjct: 27  PTLSRRTFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQY 77


>tr|A9PJW8|A9PJW8_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 136

 Score = 64.3 bits (155), Expect(2) = 9e-15
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS +GD YA G TGL I AVTL  IL GGALLVYST ALAQ
Sbjct: 86  GYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALAQ 136



 Score = 40.0 bits (92), Expect(2) = 9e-15
 Identities = 26/51 (50%), Positives = 28/51 (54%)
 Frame = +1

Query: 148 PKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY*Y 300
           P LS R+  IEA GV KI T +P GT          DASG   KGKGVY Y
Sbjct: 27  PTLSRRTFKIEASGV-KIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQY 76


>tr|A9NK29|A9NK29_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 150

 Score = 56.2 bits (134), Expect(2) = 4e-14
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALA 479
           G  PI    DWS +GD Y  G TGL I A+T  AIL GGALLVY+T AL+
Sbjct: 100 GYSPIYDTKDWSPTGDVYVGGKTGLLIWAITFAAILGGGALLVYNTSALS 149



 Score = 45.8 bits (107), Expect(2) = 4e-14
 Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +1

Query: 100 KSEF-CGVHVQGIPSR--SPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGL 270
           KS F  G  V+G+PS    P  S+RS+ + A G +KI    PLG      F    DA G 
Sbjct: 21  KSAFTAGTRVKGLPSPLLRPPTSSRSVKVVASGGKKIKVDEPLGPSGDLTFRNGVDAGGR 80

Query: 271 MAKGKGVY*YT 303
             KGKGVY +T
Sbjct: 81  KPKGKGVYQFT 91


>tr|A9S7M9|A9S7M9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163306 PE=4 SV=1
          Length = 147

 Score = 58.2 bits (139), Expect(2) = 9e-14
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALA 479
           G  PI   ++WS SGD+YA G   LAI A+ LG +L+GGALLVY+T AL+
Sbjct: 97  GYSPIYAKEEWSKSGDSYAGGTPALAIWALLLGGLLVGGALLVYNTSALS 146



 Score = 42.7 bits (99), Expect(2) = 9e-14
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +1

Query: 100 KSEFCGVHVQGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNR--DASGLM 273
           +S F G  VQG+P+    L+AR L++ A   +KI    PLG  P   F   +  DA G +
Sbjct: 22  RSSFSGAAVQGLPALKMNLAARPLTVTA-STKKIKVAQPLG--PSGDFKSKKGVDAGGRV 78

Query: 274 AKGKGVY 294
            KGKGVY
Sbjct: 79  LKGKGVY 85


>tr|Q6V7X5|Q6V7X5_TRIPR 10 kDa photosystem II polypeptide
           OS=Trifolium pratense PE=2 SV=1
          Length = 136

 Score = 63.5 bits (153), Expect(2) = 1e-13
 Identities = 32/51 (62%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI  P DWS +GD Y  G TGLAI AVTL  +L GGALLVY+T AL+Q
Sbjct: 86  GYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTLAGLLAGGALLVYNTSALSQ 136



 Score = 37.0 bits (84), Expect(2) = 1e-13
 Identities = 24/57 (42%), Positives = 30/57 (52%)
 Frame = +1

Query: 124 VQGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY 294
           V+G+P+ S     R   + A GV+KI T +P GT          DASG   KGKGVY
Sbjct: 23  VRGLPNLS-----RPFRVVASGVKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVY 74


>tr|A1YN01|A1YN01_BRACM Photosystem II 10kDa polytpeptide
           OS=Brassica campestris PE=2 SV=1
          Length = 140

 Score = 64.3 bits (155), Expect(2) = 3e-13
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS SGD Y  G TGLAI AVTL  IL GGALLVY+T ALAQ
Sbjct: 90  GYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 140



 Score = 35.0 bits (79), Expect(2) = 3e-13
 Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +1

Query: 124 VQGIPS--RSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY 294
           V+G+PS  R+P     S  I A GV+KI T  P G           DASG   KG GVY
Sbjct: 24  VRGLPSLTRAPS----SFKIVASGVKKIKTDKPFGVNGSMDLRDGLDASGRKGKGYGVY 78


>tr|Q84XP6|Q84XP6_BRARP Photosystem II 10kDa polypeptide (Fragment)
           OS=Brassica rapa subsp. pekinensis PE=2 SV=1
          Length = 137

 Score = 64.3 bits (155), Expect(2) = 3e-13
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   D+WS SGD Y  G TGLAI AVTL  IL GGALLVY+T ALAQ
Sbjct: 87  GYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 137



 Score = 35.0 bits (79), Expect(2) = 3e-13
 Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +1

Query: 124 VQGIPS--RSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY 294
           V+G+PS  R+P     S  I A GV+KI T  P G           DASG   KG GVY
Sbjct: 21  VRGLPSLTRAPS----SFKIVASGVKKIKTDKPFGVNGSMDLRDGLDASGRKGKGYGVY 75


>tr|A1Z271|A1Z271_BRAJU PSII 10Kd peptide OS=Brassica juncea PE=2
           SV=1
          Length = 141

 Score = 62.8 bits (151), Expect(2) = 6e-13
 Identities = 33/51 (64%), Positives = 36/51 (70%)
 Frame = +3

Query: 330 GCRPICIPDDWSTSGDNYAAGPTGLAISAVTLGAILMGGALLVYSTCALAQ 482
           G  PI   ++WS SGD Y  G TGLAI AVTL  IL GGALLVY+T ALAQ
Sbjct: 91  GYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 141



 Score = 35.4 bits (80), Expect(2) = 6e-13
 Identities = 24/61 (39%), Positives = 30/61 (49%)
 Frame = +1

Query: 127 QGIPSRSPKLSARSLSIEARGVQKIWTQSPLGTIPRALFWGNRDASGLMAKGKGVY*YTR 306
           +G+PS + + S  S  I A GV+KI T  P G           DASG   KG GVY +  
Sbjct: 25  RGLPSLT-RASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGRKGKGYGVYKFVD 83

Query: 307 E 309
           E
Sbjct: 84  E 84