DK960554 |
Clone id |
TST39A01NGRL0007_L19 |
Library |
TST39 |
Length |
613 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_L19. 5' end sequence. |
Accession |
DK960554 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCGGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTGT AAGACAAGTCTGCAGTTATAGTAGCCATGCAGAGATACTACAAGATCATAAGCTCCATCA TGCCTTAAAGCCTCCCTAGTCAATTTGTCATCCATACATACTGCAAAATTCCCATGTAGG GGTGTGTAAGTTTGAAGGGGGAAGAAGGGAAGGAAAAGGGGGGGGTGGGAGGGGCGCGCT TCACTGATGTTCAAGAGCTGAAAACAATGTAGAAACCTTGCCACAGTCCGAACAAAGAAA TGACAACAGCAGCATTTTCCTTCGTAAAGCCTGCTCATTCGCAGATCTGCTCCACTGCTT TTACAATTTGTAGTGGCTGGACCACAGTTGCTTCTTCCAAAGTTCCCGCATATGGCGTGG GCACATCTTGAGAAGAGAGGCACATTATCGGGGCATCCAAATAGTCCCAAAAGTTATCAA TGATGGAGGATCTCAAACTGGCCCCAATTCCTCCTGTCCGCATACATTCCTCCACAATCA GCACTCTATGTGTCTTCTTGATAGAGTTTCCGATTGTGTAGAGATCAAAAGGCTTCAATG AGATGATGTCTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q32RS0 |
Definition |
sp|Q32RS0|ODPB_STAPU Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum |
Align length |
91 |
Score (bit) |
147.0 |
E-value |
3.0e-35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2QM55 |
Definition |
tr|Q2QM55|Q2QM55_ORYSJ Os12g0616900 protein OS=Oryza sativa subsp. japonica |
Align length |
92 |
Score (bit) |
172.0 |
E-value |
1.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960554|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_L19, 5' (555 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2QM55|Q2QM55_ORYSJ Os12g0616900 protein OS=Oryza sativa subs... 172 1e-41 tr|B8BN11|B8BN11_ORYSI Putative uncharacterized protein OS=Oryza... 172 1e-41 tr|B7ZWU6|B7ZWU6_MAIZE Putative uncharacterized protein OS=Zea m... 172 1e-41 tr|B6TQ36|B6TQ36_MAIZE Pyruvate dehydrogenase E1 component subun... 172 1e-41 tr|A3CJH1|A3CJH1_ORYSJ Putative uncharacterized protein OS=Oryza... 172 1e-41 tr|B6T565|B6T565_MAIZE Pyruvate dehydrogenase E1 component subun... 170 5e-41 tr|Q10G39|Q10G39_ORYSJ Pyruvate dehydrogenase E1 component beta ... 169 7e-41 tr|Q10G38|Q10G38_ORYSJ Os03g0645100 protein OS=Oryza sativa subs... 169 7e-41 tr|B8ANM1|B8ANM1_ORYSI Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|A3AKT8|A3AKT8_ORYSJ Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|O65087|O65087_PICMA Pyruvate dehydrogenase E1 beta subunit (F... 168 2e-40 tr|A9NWM3|A9NWM3_PICSI Putative uncharacterized protein OS=Picea... 168 2e-40 tr|A9NWC1|A9NWC1_PICSI Putative uncharacterized protein OS=Picea... 168 2e-40 tr|Q9XF01|Q9XF01_PINBN Pyruvate dehydrogenase E1 beta subunit (F... 167 3e-40 tr|Q8LAI3|Q8LAI3_ARATH Putative pyruvate dehydrogenase E1 beta s... 160 4e-38 tr|O64688|O64688_ARATH Putative pyruvate dehydrogenase E1 beta s... 160 4e-38 tr|A5ACP6|A5ACP6_VITVI Putative uncharacterized protein OS=Vitis... 159 7e-38 tr|A7PZ40|A7PZ40_VITVI Chromosome chr4 scaffold_39, whole genome... 159 1e-37 tr|Q9C6Z3|Q9C6Z3_ARATH Pyruvate dehydrogenase E1 beta subunit, p... 158 2e-37 tr|O24458|O24458_ARATH Pyruvate dehydrogenase E1 beta subunit (P... 158 2e-37 tr|B5LAW3|B5LAW3_CAPAN Putative pyruvate dehydrogenase E1 beta s... 155 2e-36 tr|A9P9K0|A9P9K0_POPTR Putative uncharacterized protein OS=Popul... 155 2e-36 tr|A9SPL8|A9SPL8_PHYPA Predicted protein OS=Physcomitrella paten... 151 2e-35 tr|A9SXT8|A9SXT8_PHYPA Predicted protein OS=Physcomitrella paten... 150 4e-35 tr|A7Q149|A7Q149_VITVI Chromosome chr10 scaffold_43, whole genom... 149 1e-34 tr|B5VZ21|B5VZ21_SPIMA Transketolase central region OS=Arthrospi... 129 1e-28 tr|B7JV29|B7JV29_SYNP8 Transketolase central region OS=Synechoco... 128 2e-28 tr|B4C3U5|B4C3U5_9CHRO Transketolase central region OS=Cyanothec... 128 2e-28 tr|B8HQ22|B8HQ22_9CHRO Transketolase central region OS=Cyanothec... 127 4e-28 tr|B0CEA8|B0CEA8_ACAM1 Pyruvate dehydrogenase E1 component beta ... 127 5e-28
>tr|Q2QM55|Q2QM55_ORYSJ Os12g0616900 protein OS=Oryza sativa subsp. japonica GN=Os12g0616900 PE=2 SV=1 Length = 391
Score = 172 bits (435), Expect = 1e-41 Identities = 84/92 (91%), Positives = 88/92 (95%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 300 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 359
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA TLE+ATVVQP QIV AVEQIC+ Sbjct: 360 SQDVPTPYAATLEDATVVQPAQIVAAVEQICQ 391
>tr|B8BN11|B8BN11_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_39129 PE=4 SV=1 Length = 391
Score = 172 bits (435), Expect = 1e-41 Identities = 84/92 (91%), Positives = 88/92 (95%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 300 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 359
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA TLE+ATVVQP QIV AVEQIC+ Sbjct: 360 SQDVPTPYAATLEDATVVQPAQIVAAVEQICQ 391
>tr|B7ZWU6|B7ZWU6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 319
Score = 172 bits (435), Expect = 1e-41 Identities = 84/92 (91%), Positives = 88/92 (95%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 228 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 287
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA TLE+ATVVQP QIV AVEQIC+ Sbjct: 288 SQDVPTPYAATLEDATVVQPAQIVAAVEQICQ 319
>tr|B6TQ36|B6TQ36_MAIZE Pyruvate dehydrogenase E1 component subunit beta OS=Zea mays PE=2 SV=1 Length = 396
Score = 172 bits (435), Expect = 1e-41 Identities = 84/92 (91%), Positives = 88/92 (95%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 305 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 364
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA TLE+ATVVQP QIV AVEQIC+ Sbjct: 365 SQDVPTPYAATLEDATVVQPAQIVAAVEQICQ 396
>tr|A3CJH1|A3CJH1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_035443 PE=4 SV=1 Length = 375
Score = 172 bits (435), Expect = 1e-41 Identities = 84/92 (91%), Positives = 88/92 (95%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 284 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 343
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA TLE+ATVVQP QIV AVEQIC+ Sbjct: 344 SQDVPTPYAATLEDATVVQPAQIVAAVEQICQ 375
>tr|B6T565|B6T565_MAIZE Pyruvate dehydrogenase E1 component subunit beta OS=Zea mays PE=2 SV=1 Length = 383
Score = 170 bits (430), Expect = 5e-41 Identities = 82/91 (90%), Positives = 87/91 (95%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+I+DNFWDYLDAPIMCLS Sbjct: 292 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIVDNFWDYLDAPIMCLS 351
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQIC 283 SQDVPTPYA TLE+ATVVQP QIV AVEQ+C Sbjct: 352 SQDVPTPYAATLEDATVVQPAQIVAAVEQLC 382
>tr|Q10G39|Q10G39_ORYSJ Pyruvate dehydrogenase E1 component beta subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g44300 PE=4 SV=1 Length = 400
Score = 169 bits (429), Expect = 7e-41 Identities = 83/92 (90%), Positives = 87/92 (94%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 309 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 368
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA LE+ATVVQP QIV AVEQIC+ Sbjct: 369 SQDVPTPYAAPLEDATVVQPAQIVAAVEQICQ 400
>tr|Q10G38|Q10G38_ORYSJ Os03g0645100 protein OS=Oryza sativa subsp. japonica GN=Os03g0645100 PE=2 SV=1 Length = 307
Score = 169 bits (429), Expect = 7e-41 Identities = 83/92 (90%), Positives = 87/92 (94%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 216 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 275
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA LE+ATVVQP QIV AVEQIC+ Sbjct: 276 SQDVPTPYAAPLEDATVVQPAQIVAAVEQICQ 307
>tr|B8ANM1|B8ANM1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12799 PE=4 SV=1 Length = 400
Score = 169 bits (429), Expect = 7e-41 Identities = 83/92 (90%), Positives = 87/92 (94%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 309 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 368
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA LE+ATVVQP QIV AVEQIC+ Sbjct: 369 SQDVPTPYAAPLEDATVVQPAQIVAAVEQICQ 400
>tr|A3AKT8|A3AKT8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011410 PE=4 SV=1 Length = 393
Score = 169 bits (429), Expect = 7e-41 Identities = 83/92 (90%), Positives = 87/92 (94%) Frame = -1
Query: 555 IDIISLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLRSSIIDNFWDYLDAPIMCLS 376 IDI SLKPFDL+TIGNSIKKTHRVLIVEECMRTGGIGASLRS+IIDNFWDYLDAPIMCLS Sbjct: 302 IDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLS 361
Query: 375 SQDVPTPYAGTLEEATVVQPLQIVKAVEQICE 280 SQDVPTPYA LE+ATVVQP QIV AVEQIC+ Sbjct: 362 SQDVPTPYAAPLEDATVVQPAQIVAAVEQICQ 393
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