DK960555 [AcEST]

DK960555
Clone id	TST39A01NGRL0007_L20
Library	TST39
Length	648
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_L20. 5' end sequence.
Accession	DK960555
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	-
Sequence	CGTCGATGCTGCGGATGTTCCTTCCGACTCCTTGCCTGCGATTTAGAGTGCTGTGCATCC TTGGATTCCTCTCTCTGAACTGGAACAAGTAAGCTTTACGTTCTCCCTGCGGCGCACACG CGCGCGCCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGCCG ATTTTGATTCTCTTTCACAAAAACATCGTTCTGCACACGTACGCCCGCTTGTATGGAAAG TAGGGAAACTGAGCACCCTGCATCAGAAAATTGACTTCATTTTCCAAGAAGGAAGACAAC ATTTTGAGGGCCTATCAGTCAGGGTTCTCGACGTTGATGCATCCGGATGCAAGCAAAGCA GCTTGTCTAGCATGGACATATTCCAGCAGAAAGCCAGGCATAAATTGACTGAAGCTGCCT CGTTATTCACATGTCATATGAACGATTGGCCTACCGGTGGATTGACAACTTGATTGGGTT ATATGGCCTTGCGGCAGCAGATAGAAAGAAAAGGTACAAGTGGCCAGGCCCAGGCAATGC CTGGCCGCAAGAATAACCCCATCAATACAGGTATTTCAGCTTATCCATTGCCAGGTAAAT ATCCGCAAGGATGCAACATCGGCATTCACACTACCAGTAAATATCCTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q5U2P0
Definition	sp\|Q5U2P0\|DI3L1_RAT DIS3-like exonuclease 1 OS=Rattus norvegicus
Align length	50
Score (bit)	31.6
E-value	3.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960555\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_L20, 5' (633 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q5U2P0\|DI3L1_RAT DIS3-like exonuclease 1 OS=Rattus norvegicus... 32 3.5 sp\|Q5R5N8\|DI3L1_PONAB DIS3-like exonuclease 1 OS=Pongo abelii GN... 31 6.1 sp\|Q66JJ3\|ADPRM_XENTR Magnesium-dependent ADP-ribose/CDP-alcohol... 30 8.0 >sp\|Q5U2P0\|DI3L1_RAT DIS3-like exonuclease 1 OS=Rattus norvegicus GN=Dis3l PE=2 SV=2 Length = 1054 Score = 31.6 bits (70), Expect = 3.5 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +3 Query: 180 DFDSLSQKHRSAHVRPLVWKVGKLSTLHQKIDFIFQE-GRQHFEGLSVRV 326 +F +L +++R A + LVW +GKL+ + + I G EG+ VRV Sbjct: 609 EFKTLEEQNRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRV 658 >sp\|Q5R5N8\|DI3L1_PONAB DIS3-like exonuclease 1 OS=Pongo abelii GN=DIS3L PE=2 SV=1 Length = 1054 Score = 30.8 bits (68), Expect = 6.1 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 180 DFDSLSQKHRSAHVRPLVWKVGKLSTLHQKIDFIFQE-GRQHFEGLSVRV 326 +F L +K R A + LVW +GKL+ + + + G EG+ VRV Sbjct: 609 EFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRV 658 >sp\|Q66JJ3\|ADPRM_XENTR Magnesium-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus tropicalis PE=2 SV=1 Length = 342 Score = 30.4 bits (67), Expect = 8.0 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 265 RKLTSFSKKEDNILRAYQSGFSTLMHPDASKAACLAWTY 381 R LTS +KE+N+ +HPDA+ CL W Y Sbjct: 222 RVLTSSDEKEENVFVVSHLP----VHPDAADPMCLVWNY 256
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960555\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_L20, 5' (633 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****