DK960559
Clone id TST39A01NGRL0007_L24
Library
Length 656
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_L24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTCCTGCCATTTTCGCCCAATTCGAATTGGCCATGGCGTCCGGCGATAAAACCGTTGCTT
TGGTTTCCTTCGCTTTGTAGCCTTCGCTGTGGCCATGGCTGTAGCTTTGGCTATGGCTAT
GGTTGAATAATTGAGTCTTCTCCGCTCCTTTATGCACAGCTTCATCGTTCTGGAATTGTT
CTGCAAGGTGTGGCTTCTCCCTGGAAAGGTCAACTGCGACAATGCGTGACGGTCAAGGGT
GTCTGCTTCCGGTGCTACACAGCCCTTTGGCTCCCCTTGTTTTGGAGGAGAACCCCATTG
GTTCGGCATCATGGGTGCTACCCCAGATTTGCAGAGCAGAGGTTATATCTCAGCTCCCAG
AGGTATTGTCTTCTTCTCTTTCACCTGTGAATTCAGGACAGAACTCTGTGCCTGGCAAGA
GAAAGAGGCTGCACAAGTGTAAAGATGCCATGGGAGGGCCTGGCTATGGTGGTGCCAGGA
TTATTCGGAAAGATTTTGGAAATGAATGTGGAAAAGGCCTTTTCAACAAAGCTTCTTTAT
GCCCAGAGGGGCATCTCTGTCTGCAAACGGAGTTAGGAGTTGATTCACATGCAGGTGTGA
AGGAGGTTCCAGATTGGGAGACTTTGAAAGTACAAGCAGAGGACAAGAAAGCGCGC
■■Homology search results ■■ -
sp_hit_id Q9I8F8
Definition sp|Q9I8F8|PA2_BOTPC Phospholipase A2 OS=Bothrops pictus
Align length 80
Score (bit) 32.7
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960559|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_L24, 5'
(656 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9I8F8|PA2_BOTPC Phospholipase A2 OS=Bothrops pictus PE=2 SV=1 33 1.7
sp|Q02957|KRA61_RABIT Keratin, glycine/tyrosine-rich of hair OS=... 31 5.0
sp|Q9SK28|FH18_ARATH Formin-like protein 18 OS=Arabidopsis thali... 30 8.5

>sp|Q9I8F8|PA2_BOTPC Phospholipase A2 OS=Bothrops pictus PE=2 SV=1
Length = 122

Score = 32.7 bits (73), Expect = 1.7
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 15/80 (18%)
Frame = +1

Query: 58 LWFPSLCSLRCGHG-----------CSFGYG--YG*IIESSPL--LYAQLHRSGIVLQGV 192
+WF CG G C F + YG + + P +Y +G+V+ G
Sbjct: 18 VWFYGSYGCFCGSGGQGRPQDASDRCCFVHDCCYGKVTDCDPKTDIYTYSEENGVVVCGG 77

Query: 193 ASPWKGQLRQCVTVKGVCFR 252
P K Q+ +C V VCFR
Sbjct: 78 DDPCKKQICECDRVAAVCFR 97


>sp|Q02957|KRA61_RABIT Keratin, glycine/tyrosine-rich of hair
OS=Oryctolagus cuniculus GN=KAP6-1 PE=2 SV=2
Length = 80

Score = 31.2 bits (69), Expect = 5.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1

Query: 82 LRCGHGCSFGYGYG 123
L CG+GC +GYGYG
Sbjct: 44 LGCGYGCGYGYGYG 57


>sp|Q9SK28|FH18_ARATH Formin-like protein 18 OS=Arabidopsis thaliana
GN=FH18 PE=2 SV=2
Length = 1111

Score = 30.4 bits (67), Expect = 8.5
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Frame = -2

Query: 598 TPACESTPNSVCRQRCP--------SGHKEALLKRPFPHSFP--KSFRIILAPP*PGPPM 449
TP+ ST NS+ Q P H+ AL P P P K PP P PP+
Sbjct: 586 TPSPSSTSNSIATQGPPPPPPPPPLQSHRSALSSSPLPPPLPPKKLLATTNPPPPPPPPL 645

Query: 448 AS 443
S
Sbjct: 646 HS 647


tr_hit_id Q4JCI1
Definition tr|Q4JCI1|Q4JCI1_SULAC Conserved Archaeal protein OS=Sulfolobus acidocaldarius
Align length 47
Score (bit) 33.9
E-value 9.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960559|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_L24, 5'
(656 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4JCI1|Q4JCI1_SULAC Conserved Archaeal protein OS=Sulfolobus ... 34 9.0

>tr|Q4JCI1|Q4JCI1_SULAC Conserved Archaeal protein OS=Sulfolobus
acidocaldarius GN=Saci_0071 PE=4 SV=1
Length = 337

Score = 33.9 bits (76), Expect = 9.0
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3

Query: 492 DFGNECGKGLFNKASLCPEGHLCLQTELGVDSHAGVKEVPDWETLKV 632
D+G E KG++ S+ P L T LGV+ + V+E PDW LK+
Sbjct: 288 DYGEEIEKGVW---SISPS----LITHLGVNEYVLVEEYPDWRKLKI 327