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NBDC - LSDB Archive
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DK960563
Clone id TST39A01NGRL0007_M04
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_M04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATCAAGAAAGGTAAGCAGGAAGGAAGCCGCAGTCATGGCAGCAACAACTGCCTCCCTCTC
CTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGAGCTCTCTCGCAAGGTGGG
AGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTCCTCATCTGGCAGCATCTG
GTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGGCTCTCCCCCATCCTACCT
CACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGGTCTGTCCGCAGACCCAGA
GACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAGATGGGCCATGATGGGAGC
CTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAAGAACGGTGTCAAGTTAGGTGAGGCTGT
GTGGTTCAAGGCTGGCTCCCAGATCTTCGCCG
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 140
Score (bit) 259.0
E-value 4.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960563|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M04, 5'
         (452 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   259   4e-69
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   209   4e-54
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   202   5e-52
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   202   7e-52
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   201   9e-52
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   201   1e-51
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   201   2e-51
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   200   2e-51
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   199   4e-51
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   199   6e-51
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   198   8e-51
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   198   8e-51
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   198   8e-51
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   198   8e-51
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   198   8e-51
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   197   1e-50
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   197   1e-50
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   197   1e-50
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   197   2e-50
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   197   2e-50
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   197   2e-50
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   197   2e-50
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   196   4e-50
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   196   5e-50
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   195   7e-50
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   195   9e-50
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   195   9e-50
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   195   9e-50
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   194   1e-49
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   194   1e-49

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  259 bits (662), Expect = 4e-69
 Identities = 128/140 (91%), Positives = 135/140 (96%), Gaps = 1/140 (0%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 211
           MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG
Sbjct: 1   MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59

Query: 212 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLA 391
           PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM+GALGCVTPELLA
Sbjct: 60  PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119

Query: 392 KNGVKLGEAVWFKAGSQIFA 451
           KNGVK GEAVWFKAGSQIFA
Sbjct: 120 KNGVKFGEAVWFKAGSQIFA 139


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  209 bits (532), Expect = 4e-54
 Identities = 103/135 (76%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
 Frame = +2

Query: 47  TASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSG 223
           T+++  S F+GQ L KP NEL RKVG    RV M    KS+  SIWYG DRP YLGPFS 
Sbjct: 3   TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 224 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAKNGV 403
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM+GALGCV PELLAKNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 404 KLGEAVWFKAGSQIF 448
           K GEAVWFKAGSQIF
Sbjct: 123 KFGEAVWFKAGSQIF 137


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
           OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
          Length = 266

 Score =  202 bits (514), Expect = 5e-52
 Identities = 105/143 (73%), Positives = 111/143 (77%), Gaps = 4/143 (2%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 202
           MAATT SLSSS F+G   K V  L      G+ARV M       K+ SS S WYGSDR L
Sbjct: 1   MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57

Query: 203 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPE 382
           YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM+GALGCV PE
Sbjct: 58  YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 383 LLAKNGVKLGEAVWFKAGSQIFA 451
           LLA+NGVK GEA WFKAGSQIF+
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFS 140


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  202 bits (513), Expect = 7e-52
 Identities = 101/142 (71%), Positives = 116/142 (81%), Gaps = 3/142 (2%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 205
           MAA TA  S+++     +KPVNELSRKV G  EARV M      S+GS  IWYG+DRP +
Sbjct: 1   MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 206 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPEL 385
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 386 LAKNGVKLGEAVWFKAGSQIFA 451
           LAK+GVK GEAVWFKAG+QIF+
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFS 142



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 218 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAKN 397
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 398 G 400
           G
Sbjct: 240 G 240


>sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2,
           chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1
          Length = 267

 Score =  201 bits (512), Expect = 9e-52
 Identities = 99/140 (70%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 211
           MAA+T +LSS  F+G+ +K     S  +G+G   ++    K K  SGS WYGSDR  YLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 212 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLA 391
           PFSG  PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAM+GALGCV PELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 392 KNGVKLGEAVWFKAGSQIFA 451
           +NGVK GEAVWFKAGSQIF+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFS 140


>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1,
           chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1
          Length = 266

 Score =  201 bits (511), Expect = 1e-51
 Identities = 97/139 (69%), Positives = 108/139 (77%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 214
           MAA+T +LSS  F+G+ +K     S   G G   ++        SGS WYGSDR  YLGP
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60

Query: 215 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAK 394
           FSG PPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAM+GALGCV PELLA+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 395 NGVKLGEAVWFKAGSQIFA 451
           NGVK GEAVWFKAGSQIF+
Sbjct: 121 NGVKFGEAVWFKAGSQIFS 139


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  201 bits (510), Expect = 2e-51
 Identities = 102/144 (70%), Positives = 114/144 (79%), Gaps = 5/144 (3%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 199
           MA++T +LSS+ F+G+ +   + L      GEARV M      A   +SSGS WYG DR 
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55

Query: 200 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTP 379
           LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM+GALGCV P
Sbjct: 56  LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115

Query: 380 ELLAKNGVKLGEAVWFKAGSQIFA 451
           ELLA+NGVK GEAVWFKAGSQIF+
Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFS 139


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  200 bits (509), Expect = 2e-51
 Identities = 100/137 (72%), Positives = 110/137 (80%), Gaps = 2/137 (1%)
 Frame = +2

Query: 47  TASLSSSVFSGQQ-LKPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFS 220
           T+++  S F+GQ  LK  NEL  K+GA G  RV M    KS+  SIWYG DRP YLGPFS
Sbjct: 3   TSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFS 62

Query: 221 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAKNG 400
              PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM+GALGCV PE+L+KNG
Sbjct: 63  DQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 401 VKLGEAVWFKAGSQIFA 451
           VK GEAVWFKAGSQIF+
Sbjct: 123 VKFGEAVWFKAGSQIFS 139


>sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180,
           chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1
           SV=1
          Length = 267

 Score =  199 bits (507), Expect = 4e-51
 Identities = 98/140 (70%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 211
           MAA+T +LSS  F+G+ +      S  +G+G   ++    K K  SGS WYGSDR  YLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 212 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLA 391
           PFSG  PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAM+GALGCV PELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 392 KNGVKLGEAVWFKAGSQIFA 451
           +NGVK GEAVWFKAGSQIF+
Sbjct: 121 RNGVKFGEAVWFKAGSQIFS 140


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  199 bits (505), Expect = 6e-51
 Identities = 98/137 (71%), Positives = 108/137 (78%), Gaps = 2/137 (1%)
 Frame = +2

Query: 47  TASLSSSVFSGQQL-KPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFS 220
           T ++  S F GQ + K  NE  RKVG  GE R+ M    KS+  SIWYG DRP YLGPFS
Sbjct: 3   TCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFS 62

Query: 221 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAKNG 400
              PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAM+GALGCV PE+L+KNG
Sbjct: 63  EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 401 VKLGEAVWFKAGSQIFA 451
           VK GEAVWFKAGSQIF+
Sbjct: 123 VKFGEAVWFKAGSQIFS 139
tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 146
Score (bit) 256.0
E-value 3.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960563|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M04, 5'
         (452 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   256   3e-67
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   219   5e-56
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   216   5e-55
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   215   1e-54
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   213   4e-54
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   212   9e-54
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   212   9e-54
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   211   1e-53
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   211   1e-53
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   211   1e-53
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   207   2e-52
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   207   3e-52
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   206   5e-52
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   206   6e-52
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   205   1e-51
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   204   1e-51
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   204   1e-51
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   204   1e-51
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   204   1e-51
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   204   2e-51
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   204   2e-51
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   204   2e-51
tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind...   204   2e-51
tr|Q39141|Q39141_ARATH Photosystem II type I chlorophyll a /b bi...   203   3e-51
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   203   3e-51
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   203   4e-51
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote...   202   5e-51
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   202   5e-51
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   202   7e-51
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   202   7e-51

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  256 bits (655), Expect = 3e-67
 Identities = 130/146 (89%), Positives = 133/146 (91%), Gaps = 7/146 (4%)
 Frame = +2

Query: 35  MAATT-------ASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSD 193
           MAATT       A LSSSVFSGQQLKPVNELSRKVG  EARVQMMAPKKSSSG+I YG+D
Sbjct: 1   MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSSSGNIRYGAD 60

Query: 194 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCV 373
           R LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM+GALGCV
Sbjct: 61  RLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 120

Query: 374 TPELLAKNGVKLGEAVWFKAGSQIFA 451
           TPELLAKNGVK GEAVWFKAGSQIFA
Sbjct: 121 TPELLAKNGVKFGEAVWFKAGSQIFA 146


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  219 bits (558), Expect = 5e-56
 Identities = 105/139 (75%), Positives = 119/139 (85%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 214
           MAA TA  S+++     LKPVNELSRKVG+ EARV M    KS+S SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60

Query: 215 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAK 394
           FSG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGC+TPELLAK
Sbjct: 61  FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120

Query: 395 NGVKLGEAVWFKAGSQIFA 451
           +GVK GEAVWFKAG+QIF+
Sbjct: 121 SGVKFGEAVWFKAGAQIFS 139


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  216 bits (550), Expect = 5e-55
 Identities = 104/139 (74%), Positives = 115/139 (82%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 214
           MAA TA  S+++     LKPVNELSRKVG  EAR+ M      SS SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60

Query: 215 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAK 394
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGCVTPELLAK
Sbjct: 61  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120

Query: 395 NGVKLGEAVWFKAGSQIFA 451
           NGVK GEAVWFKAG+QIF+
Sbjct: 121 NGVKFGEAVWFKAGAQIFS 139


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  215 bits (547), Expect = 1e-54
 Identities = 105/139 (75%), Positives = 116/139 (83%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 214
           MAA TA  S+++     LKPVNELSRKVG  EARV M   K S S SIWYG+DRP +LGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58

Query: 215 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAK 394
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGCVTPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 395 NGVKLGEAVWFKAGSQIFA 451
           NGVK GEAVWFKAG+QIF+
Sbjct: 119 NGVKFGEAVWFKAGAQIFS 137


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  213 bits (542), Expect = 4e-54
 Identities = 105/141 (74%), Positives = 118/141 (83%), Gaps = 2/141 (1%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 208
           MAA TA  S+++     LKPVNELSRKVG  EARV M   A K ++S SIWYG+DRP YL
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 209 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELL 388
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 389 AKNGVKLGEAVWFKAGSQIFA 451
           AK+GVK GEAVWFKAG+QIF+
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFS 141


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  212 bits (539), Expect = 9e-54
 Identities = 103/141 (73%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 208
           MAA TA  S+++     LKPVNELSRKVG+ +ARV M      S+GS  IWYG+DRP YL
Sbjct: 1   MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 209 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELL 388
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 389 AKNGVKLGEAVWFKAGSQIFA 451
           AK+GVK GEAVWFKAG+QIF+
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFS 141


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  212 bits (539), Expect = 9e-54
 Identities = 105/139 (75%), Positives = 117/139 (84%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 214
           MAA TA+ S+++     LK +NELSRKVG  +ARV M   K SSS SIWYG+DRP YLGP
Sbjct: 1   MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58

Query: 215 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAK 394
            SG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGCVTPELLAK
Sbjct: 59  LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 395 NGVKLGEAVWFKAGSQIFA 451
           NGVK GEAVWFKAGSQIF+
Sbjct: 119 NGVKFGEAVWFKAGSQIFS 137


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  211 bits (538), Expect = 1e-53
 Identities = 103/142 (72%), Positives = 119/142 (83%), Gaps = 3/142 (2%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 205
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 206 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPEL 385
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 386 LAKNGVKLGEAVWFKAGSQIFA 451
           LAK+GVK GEAVWFKAG+QIF+
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFS 142


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  211 bits (538), Expect = 1e-53
 Identities = 102/139 (73%), Positives = 117/139 (84%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 214
           MAA TA  S+++     LKPVNELSR+VGA EARV M   K + S SIWYG+DRP +LGP
Sbjct: 1   MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58

Query: 215 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPELLAK 394
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGC+TPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118

Query: 395 NGVKLGEAVWFKAGSQIFA 451
           +GVK GEAVWFKAG+QIF+
Sbjct: 119 SGVKFGEAVWFKAGAQIFS 137


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  211 bits (538), Expect = 1e-53
 Identities = 103/142 (72%), Positives = 119/142 (83%), Gaps = 3/142 (2%)
 Frame = +2

Query: 35  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 205
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 206 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMMGALGCVTPEL 385
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAM+GALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 386 LAKNGVKLGEAVWFKAGSQIFA 451
           LAK+GVK GEAVWFKAG+QIF+
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFS 142