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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960567
Clone id TST39A01NGRL0007_M08
Library
Length 649
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_M08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AATCAGGCGAGGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCATTGAGT
AGCTCTACCTTTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGAGGGTG
GGCAATGTGGAGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGAGCATC
TGGTATGGTCCAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCTCTTAC
CTGACCGGTGAGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCC
GAGACCTTCGCGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGTTGGGC
GCCCTCGGGTGTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTGAGGCA
GTGTGGTTCAAGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGGGCAAC
CCCAGCTTGGTGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGCTGATG
GGCGCTGTTGAGGGTTACAGAGTTGGCGGCGGCCCCCTCGGCGAGGGCCTGGACCCCATC
TACCCCGGTGGTTCCTTCGACCCCCTTGGCCTTGCTGATGATCCTGACT
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 193
Score (bit) 366.0
E-value 1.0e-101
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960567|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M08, 5'
         (649 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   366   e-101
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   355   9e-98
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   350   4e-96
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   349   8e-96
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   348   1e-95
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   348   1e-95
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   346   7e-95
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   346   7e-95
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   340   3e-93
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   340   3e-93
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   338   1e-92
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   333   5e-91
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   326   7e-89
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   317   4e-86
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   316   8e-86
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   315   1e-85
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   313   4e-85
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   312   8e-85
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   312   8e-85
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   312   1e-84
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   312   1e-84
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   311   1e-84
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   311   1e-84
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   311   2e-84
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   311   2e-84
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   311   2e-84
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   310   4e-84
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   310   4e-84
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   309   7e-84
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   309   7e-84

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  366 bits (939), Expect = e-101
 Identities = 172/193 (89%), Positives = 181/193 (93%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           FAGQT LKPQNEL ++VG    RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPG 190

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLA+DP+
Sbjct: 191 GAFDPLGLAEDPE 203


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  355 bits (912), Expect = 9e-98
 Identities = 169/194 (87%), Positives = 179/194 (92%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 246
           FAGQTALK  NEL  ++G V   RVSMRRTVKS P SIWYGPDRPKYLGPFS+  PSYLT
Sbjct: 11  FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 247 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 426
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 427 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 606
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDPIYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYP 190

Query: 607 GGSFDPLGLADDPD 648
           GG+FDPLGLADDPD
Sbjct: 191 GGAFDPLGLADDPD 204


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  350 bits (898), Expect = 4e-96
 Identities = 162/193 (83%), Positives = 179/193 (92%), Gaps = 1/193 (0%)
 Frame = +1

Query: 73  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73  EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PG
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPG 192

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDP+
Sbjct: 193 GAFDPLGLADDPE 205


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  349 bits (895), Expect = 8e-96
 Identities = 161/193 (83%), Positives = 181/193 (93%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           FAGQTALK ++EL ++VG  + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPG 190

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDP+
Sbjct: 191 GAFDPLGLADDPE 203


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  348 bits (894), Expect = 1e-95
 Identities = 164/194 (84%), Positives = 177/194 (91%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 246
           F GQ   K QNE  ++VGN  E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 247 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 426
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 427 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 606
           FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 607 GGSFDPLGLADDPD 648
           GG+FDPLGLADDP+
Sbjct: 191 GGAFDPLGLADDPE 204


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  348 bits (893), Expect = 1e-95
 Identities = 162/194 (83%), Positives = 179/194 (92%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 246
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 247 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 426
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 427 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 606
           FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190

Query: 607 GGSFDPLGLADDPD 648
           GG+FDPLGLADDP+
Sbjct: 191 GGAFDPLGLADDPE 204


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  346 bits (887), Expect = 7e-95
 Identities = 163/194 (84%), Positives = 178/194 (91%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 246
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 247 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 426
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 427 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 606
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 607 GGSFDPLGLADDPD 648
           GG+FDPLGLADDP+
Sbjct: 191 GGAFDPLGLADDPE 204


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  346 bits (887), Expect = 7e-95
 Identities = 163/194 (84%), Positives = 176/194 (90%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 246
           F G+T L+  NE  ++ GN  +AR +MRRTVKS PESIWYGPDRPKYLGPFSE  PSYLT
Sbjct: 11  FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 247 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 426
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 427 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 606
           FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190

Query: 607 GGSFDPLGLADDPD 648
           GG+FDPLGLADDPD
Sbjct: 191 GGAFDPLGLADDPD 204


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  340 bits (873), Expect = 3e-93
 Identities = 157/184 (85%), Positives = 174/184 (94%)
 Frame = +1

Query: 97  QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 276
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 277 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 456
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 457 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFDPLGLA 636
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 637 DDPD 648
           DDPD
Sbjct: 199 DDPD 202



 Score = 30.8 bits (68), Expect = 6.4
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 211 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 390
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 391 AKNG 402
              G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  340 bits (873), Expect = 3e-93
 Identities = 157/184 (85%), Positives = 174/184 (94%)
 Frame = +1

Query: 97  QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 276
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 277 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 456
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 457 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFDPLGLA 636
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 637 DDPD 648
           DDPD
Sbjct: 199 DDPD 202



 Score = 30.8 bits (68), Expect = 6.4
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 211 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 390
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 391 AKNG 402
              G
Sbjct: 232 TGKG 235
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 193
Score (bit) 362.0
E-value 1.0e-98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960567|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M08, 5'
         (649 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   362   1e-98
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   360   4e-98
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   358   2e-97
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   358   2e-97
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   357   3e-97
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   357   3e-97
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   355   1e-96
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   355   1e-96
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   355   1e-96
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   355   2e-96
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   354   2e-96
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   354   3e-96
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   353   4e-96
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   353   4e-96
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   353   7e-96
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   353   7e-96
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   353   7e-96
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   353   7e-96
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   352   9e-96
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   352   1e-95
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   351   2e-95
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   351   2e-95
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   351   2e-95
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   350   3e-95
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   350   6e-95
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   348   1e-94
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   348   2e-94
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   348   2e-94
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   347   5e-94
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   346   8e-94

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  362 bits (928), Expect = 1e-98
 Identities = 167/193 (86%), Positives = 183/193 (94%), Gaps = 1/193 (0%)
 Frame = +1

Query: 73  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDP+
Sbjct: 193 GAFDPLGLADDPE 205


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  360 bits (924), Expect = 4e-98
 Identities = 169/193 (87%), Positives = 179/193 (92%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           FAGQTALK QNEL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPG 190

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDPD
Sbjct: 191 GAFDPLGLADDPD 203


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  358 bits (919), Expect = 2e-97
 Identities = 169/194 (87%), Positives = 182/194 (93%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 246
           FAGQTALK  NEL ++VG +   R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 247 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 426
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 427 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 606
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 190

Query: 607 GGSFDPLGLADDPD 648
           GG+FDPLGLADDPD
Sbjct: 191 GGAFDPLGLADDPD 204


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
           ginseng GN=cab PE=2 SV=1
          Length = 265

 Score =  358 bits (918), Expect = 2e-97
 Identities = 168/194 (86%), Positives = 184/194 (94%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 246
           FAGQTALKPQNEL +++G++   R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 247 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 426
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 427 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 606
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 607 GGSFDPLGLADDPD 648
           GGSFDPLGLADDP+
Sbjct: 191 GGSFDPLGLADDPE 204


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  357 bits (917), Expect = 3e-97
 Identities = 166/192 (86%), Positives = 180/192 (93%)
 Frame = +1

Query: 73  AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 252
           AG+TALK QNEL K+VG    R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12  AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 253 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 432
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 433 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGG 612
           AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPGG
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGG 191

Query: 613 SFDPLGLADDPD 648
           +FDPLGLADDP+
Sbjct: 192 AFDPLGLADDPE 203


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  357 bits (916), Expect = 3e-97
 Identities = 166/193 (86%), Positives = 178/193 (92%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           F GQT LK QNEL ++VG    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPG 190

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDPD
Sbjct: 191 GAFDPLGLADDPD 203


>tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta
           vulgaris subsp. vulgaris PE=2 SV=1
          Length = 264

 Score =  355 bits (911), Expect = 1e-96
 Identities = 165/193 (85%), Positives = 178/193 (92%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           FAGQT LKPQNEL ++ G    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTILKPQNELVRKFGGNGGRASMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDKLYPG 190

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDP+
Sbjct: 191 GAFDPLGLADDPE 203


>tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII
           type I OS=Lilium longiflorum PE=2 SV=1
          Length = 264

 Score =  355 bits (911), Expect = 1e-96
 Identities = 166/193 (86%), Positives = 181/193 (93%)
 Frame = +1

Query: 70  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           F GQTALK ++EL ++VG V  RVSMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTG
Sbjct: 11  FTGQTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTG 70

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKNGVKFGEAVWF 130

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPG 190

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDPD
Sbjct: 191 GAFDPLGLADDPD 203


>tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  355 bits (911), Expect = 1e-96
 Identities = 166/193 (86%), Positives = 182/193 (94%), Gaps = 1/193 (0%)
 Frame = +1

Query: 73  AGQTALKP-QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           AGQT L+P QNEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTG 72

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLAK GVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWF 132

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDP+
Sbjct: 193 GAFDPLGLADDPE 205


>tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  355 bits (910), Expect = 2e-96
 Identities = 166/193 (86%), Positives = 181/193 (93%), Gaps = 1/193 (0%)
 Frame = +1

Query: 73  AGQTALKP-QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 249
           AGQT L+P QNEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTG 72

Query: 250 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 429
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAK GVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWF 132

Query: 430 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 609
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 610 GSFDPLGLADDPD 648
           G+FDPLGLADDP+
Sbjct: 193 GAFDPLGLADDPE 205