DK960572
Clone id TST39A01NGRL0007_M13
Library
Length 640
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_M13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTCTTCTCCTCTCCTCTCTCACCTGCTCCCTCATCTCCCTAGCAATGTCTATACGAGAA
GCTATCCGCTTCCGCACCAAAGCTCAACAACTGGTATCAGAGCTTTGGGGAAAGGTCTTG
TAGGTATTCATGAGTTGAGGTATAAAGGCGGGTTTCCAAAGAAGTGGGGTTGGTCTGTGT
CATACCAGATACTACTAGAGTGAAGGGACTTCTTGGGAGCCATCATCAGCATGCACGGCT
CCGAGCTTCCAGGAGATCTCATTCATGGATTTAGCTATTGCCCGCTGAATGTTGCCAGCG
AGAAGGCTGTTGCAGCAGTGCTCGCTTGTGGTGCTCTCTTGTCTTCCCCCTCGATAATAT
AGCCTCAATAGGGAGCTCGACAGGCCAAAGGCCCGTGAGAAGGGAAGCCTCGAAGGGGCA
TAGCCAGCCTTGAGATGAGGGCAATAGCCCGGGGGCTGAGCATACGAAACTAGAGAAGGA
AAATTGGAAGCATGAGGCTCAGGCCCGGATCCGGTGATAGAGAGGGGCAGCAGCAGCACG
TGATGAGCGAGGGCTTTGAGAGCACTGCAGAGGGTCGAGTGGTGGCCCGAATGGGTCACC
ATGCTCATGAGAGTCACGGGCAGGGCGGAAGTCACATAAG
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 55
Score (bit) 42.7
E-value 0.002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960572|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M13, 5'
(640 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 43 0.002
sp|Q5D862|FILA2_HUMAN Filaggrin-2 OS=Homo sapiens GN=FLG2 PE=1 SV=1 32 2.1
sp|O73689|ZIC1_XENLA Zinc finger protein ZIC 1 OS=Xenopus laevis... 30 8.1

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 42.7 bits (99), Expect = 0.002
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = -1

Query: 274 LNP*MRSPGSSEPCMLMMAPKKSLHSSSIWYDTDQP----HFFGNPPLYLNS*IP 122
+N R G+ E + MMAPK S SIWY +D+P F G+PP YL+ P
Sbjct: 20 VNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74


>sp|Q5D862|FILA2_HUMAN Filaggrin-2 OS=Homo sapiens GN=FLG2 PE=1 SV=1
Length = 2391

Score = 32.3 bits (72), Expect = 2.1
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3

Query: 507 GSGDREGQQQHVMSEGFESTAEGRVVARMGHHAHESHGQGGS 632
GSG G QHV G +S+ G+ +R GH ++ HG G S
Sbjct: 661 GSGQSSGFGQHVSGSG-QSSGFGQHESRSGHSSYGQHGFGSS 701


>sp|O73689|ZIC1_XENLA Zinc finger protein ZIC 1 OS=Xenopus laevis
GN=zic1 PE=2 SV=1
Length = 443

Score = 30.4 bits (67), Expect = 8.1
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3

Query: 483 IGSMRLRPGSGDREGQQQHVMSEGFESTAEGRVVARMGHHAHESH 617
+G+ +L P S D Q F S A G A +GHH H H
Sbjct: 44 MGAFKLNPSSHDLASGQT-----AFTSQAPGYAAAALGHHHHPGH 83


tr_hit_id Q0CF36
Definition tr|Q0CF36|Q0CF36_ASPTN Predicted protein OS=Aspergillus terreus (strain NIH 2624)
Align length 68
Score (bit) 33.9
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960572|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M13, 5'
(640 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0CF36|Q0CF36_ASPTN Predicted protein OS=Aspergillus terreus ... 34 8.6

>tr|Q0CF36|Q0CF36_ASPTN Predicted protein OS=Aspergillus terreus
(strain NIH 2624) GN=ATEG_07698 PE=4 SV=1
Length = 514

Score = 33.9 bits (76), Expect = 8.6
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3

Query: 57 RSYPLPHQSSTTGIRALGKGLVGIHELRYKGGFP-KKWGWSVSYQILLE*RDFLGAIISM 233
+ + LPH + T G+ G H L GFP +KWGW V + LE D GAI +
Sbjct: 147 KGFALPHGTCPT------VGVAG-HSLGGGWGFPSRKWGWLVDRIVALEFVDVNGAIKQL 199

Query: 234 HGSELPGD 257
S + D
Sbjct: 200 SASSVGSD 207