| DK960577 |
| Clone id |
TST39A01NGRL0007_M18 |
| Library |
TST39 |
| Length |
675 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_M18. 5' end sequence. |
| Accession |
DK960577 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL1214Contig1 |
| Sequence |
CAGCATCAGACAGCAGTTTCGCAGTAGCTATCACCGTCTCCTCTGCTCGCCTTTCCATAA ATAGCCTCGAGCCTATGGAAAGAGCAAGCTTTTGAGGAACGTCGACCTACGTCTGCAGCT TATAGAGCTCATGCCTGTAGCTTAATCTTCTGAAAACCCTTCAAACAAGGCTCTCCTGCA GCGGCACCTGAAGCCATGAAGTACCTCCGCTCCGCCGTTGTCTGCTGTTTAGCTCTAGTG CTTGTGTTAGCTGTGCAAGTATGGTTTCGGCAGCCCCACTTCAGCCGATGCCCTGGCTGG TTTGCTTCCTGCAGAGAGCCCTCGTCCCTCTTCAGCTACAAGCTCTCCCTTTTTCAGAAG GGCTCACGTGAGGAGCAAGCTAAACGAGCGCTTCCTCAACATCCTCTTGATCCCCTCACC TTCTCAGAAATTCAGCAGGTGCATACCGTTCTCACCAATTCGTCTGTTTCTGCAAAAACG AATCGAAAGTATCTTCGCAAAGCAGGTAGCAAGCTCAGCATCCTCTTACATGCGGTCTCA TTAGAGGAGCCAGACAAGGAGGATGTGCTTGCATGGAAGAAGGGGGATCCTATGCCCACG CGCAAAGCCTCTGTGATTCTCATGGTTGGTGGCACCGTTTACAGGATAATAGTTGATCTC ACATCACTGATCGTG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q8H1H9 |
| Definition |
sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana |
| Align length |
91 |
| Score (bit) |
68.9 |
| E-value |
2.0e-11 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B8LKL1 |
| Definition |
tr|B8LKL1|B8LKL1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
145 |
| Score (bit) |
79.0 |
| E-value |
2.0e-13 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960577|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_M18, 5' (661 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKL1|B8LKL1_PICSI Putative uncharacterized protein OS=Picea... 79 2e-13 tr|A7QKE1|A7QKE1_VITVI Copper amine oxidase OS=Vitis vinifera GN... 79 3e-13 tr|Q9STI4|Q9STI4_ARATH Copper amine oxidase like protein (Fragme... 78 4e-13 tr|Q9SW88|Q9SW88_CANLI Amine oxidase OS=Canavalia lineata PE=2 SV=1 77 1e-12 tr|Q9M2B9|Q9M2B9_ARATH Amine oxidase-like protein (At3g43670/F23... 73 2e-11 tr|Q9STI2|Q9STI2_ARATH Copper amine oxidase OS=Arabidopsis thali... 70 9e-11 tr|Q8L742|Q8L742_ARATH Copper amine oxidase OS=Arabidopsis thali... 70 9e-11 tr|A9T1S3|A9T1S3_PHYPA Copper amine oxidase OS=Physcomitrella pa... 65 3e-09 tr|A7R8C4|A7R8C4_VITVI Chromosome undetermined scaffold_2439, wh... 65 3e-09 tr|A7QYU4|A7QYU4_VITVI Chromosome undetermined scaffold_254, who... 65 3e-09 tr|A7QVB0|A7QVB0_VITVI Chromosome chr2 scaffold_187, whole genom... 62 2e-08 tr|Q7XWW0|Q7XWW0_ORYSJ OSJNBb0067G11.7 protein OS=Oryza sativa s... 60 2e-07 tr|Q0JEI5|Q0JEI5_ORYSJ Os04g0269600 protein OS=Oryza sativa subs... 60 2e-07 tr|B8ARK2|B8ARK2_ORYSI Putative uncharacterized protein OS=Oryza... 60 2e-07 tr|A3ARS8|A3ARS8_ORYSJ Putative uncharacterized protein OS=Oryza... 60 2e-07 tr|O23349|O23349_ARATH Copper amine oxidase OS=Arabidopsis thali... 57 1e-06 tr|Q8W1C1|Q8W1C1_BRAJU Copper amine oxidase OS=Brassica juncea G... 55 3e-06 tr|O48552|O48552_ARATH Copper amine oxidase OS=Arabidopsis thali... 55 5e-06 tr|A7NWM0|A7NWM0_VITVI Chromosome chr5 scaffold_2, whole genome ... 54 1e-05 tr|A5BR05|A5BR05_VITVI Copper amine oxidase OS=Vitis vinifera GN... 54 1e-05 tr|A7NWL4|A7NWL4_VITVI Chromosome chr5 scaffold_2, whole genome ... 53 1e-05 tr|A5BCD0|A5BCD0_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|Q70EW1|Q70EW1_SOYBN Diamine oxidase (Copper amino oxidase) OS... 52 3e-05 tr|O65749|O65749_CICAR Copper amine oxidase OS=Cicer arietinum P... 52 4e-05 tr|A7NWL9|A7NWL9_VITVI Copper amine oxidase OS=Vitis vinifera GN... 49 3e-04 tr|A7NWL6|A7NWL6_VITVI Copper amine oxidase OS=Vitis vinifera GN... 48 6e-04 tr|A5AWX2|A5AWX2_VITVI Copper amine oxidase OS=Vitis vinifera GN... 48 6e-04 tr|Q5AVN9|Q5AVN9_EMENI Copper amine oxidase OS=Emericella nidula... 48 6e-04 tr|A1DF91|A1DF91_NEOFI Copper amine oxidase OS=Neosartorya fisch... 47 8e-04 tr|B7ZYE7|B7ZYE7_MAIZE Putative uncharacterized protein OS=Zea m... 47 0.001
>tr|B8LKL1|B8LKL1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 730
Score = 79.0 bits (193), Expect = 2e-13 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 10/145 (6%) Frame = +2
Query: 242 QVWFRQPHFSR------CPGWFASCREPSSLFSYKLSLFQKGSREEQAKR----ALPQHP 391 + W R P C + + C + + S + Q+ ++Q K + +HP Sbjct: 25 RTWIRLPSLGSAKIELDCSEYGSWCTFKNRIQSRSGAFIQRTKPKQQQKADHESEVAKHP 84
Query: 392 LDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLAWKKG 571 LDPLT EIQ+V +++ +S+ ++ LH+V LEEP KE+VL+WK G Sbjct: 85 LDPLTLREIQRVQSIMQKTSIF------------NQGKFALHSVVLEEPLKEEVLSWKAG 132
Query: 572 DPMPTRKASVILMVGGTVYRIIVDL 646 +PTRKASVI G Y++IVDL Sbjct: 133 SNLPTRKASVIAWADGHAYKLIVDL 157
>tr|A7QKE1|A7QKE1_VITVI Copper amine oxidase OS=Vitis vinifera GN=GSVIVT00001079001 PE=3 SV=1 Length = 727
Score = 78.6 bits (192), Expect = 3e-13 Identities = 43/92 (46%), Positives = 57/92 (61%) Frame = +2
Query: 377 LPQHPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVL 556 +P HPLDPLT EI +V T+L+ S K +++Y +HAV LEEP K VL Sbjct: 74 VPHHPLDPLTVQEINRVRTILS-SHAPLKASKRYT----------IHAVDLEEPAKPLVL 122
Query: 557 AWKKGDPMPTRKASVILMVGGTVYRIIVDLTS 652 WKKG+PM R+ASVI +VGG + + VDL + Sbjct: 123 RWKKGNPMLPRRASVIALVGGESHLLTVDLAT 154
>tr|Q9STI4|Q9STI4_ARATH Copper amine oxidase like protein (Fragment1) OS=Arabidopsis thaliana GN=T4C9.110 PE=2 SV=1 Length = 460
Score = 78.2 bits (191), Expect = 4e-13 Identities = 42/91 (46%), Positives = 59/91 (64%) Frame = +2
Query: 380 PQHPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLA 559 P HPLDPLT EI +V ++L++ ++ A S++ LL++V LEEPDK V Sbjct: 82 PNHPLDPLTVMEINKVRSILSSHALFA-----------SRVPHLLNSVVLEEPDKNLVRQ 130
Query: 560 WKKGDPMPTRKASVILMVGGTVYRIIVDLTS 652 W+KGD +P RKASVI VGG + +IVDL++ Sbjct: 131 WEKGDQLPPRKASVIARVGGNSHLLIVDLST 161
>tr|Q9SW88|Q9SW88_CANLI Amine oxidase OS=Canavalia lineata PE=2 SV=1 Length = 735
Score = 76.6 bits (187), Expect = 1e-12 Identities = 45/122 (36%), Positives = 63/122 (51%) Frame = +2
Query: 287 FASCREPSSLFSYKLSLFQKGSREEQAKRALPQHPLDPLTFSEIQQVHTVLTNSSVSAKT 466 F+S +P + +Q E +PQHPLDPLT E +V +L+ + Sbjct: 52 FSSSTKPKVIKKQPSFTYQNNHESE-----VPQHPLDPLTIQEFNKVRNILSTHPLFK-- 104
Query: 467 NRKYLRKAGSKLSILLHAVSLEEPDKEDVLAWKKGDPMPTRKASVILMVGGTVYRIIVDL 646 S S +LH++ L+EPDK+ VL WKKGDP+ RKASVI V Y + VDL Sbjct: 105 ---------SPSSYILHSIVLDEPDKKLVLKWKKGDPLLPRKASVIARVNRVAYVLTVDL 155
Query: 647 TS 652 ++ Sbjct: 156 ST 157
>tr|Q9M2B9|Q9M2B9_ARATH Amine oxidase-like protein (At3g43670/F23N14_50) OS=Arabidopsis thaliana GN=F23N14_50 PE=2 SV=1 Length = 687
Score = 72.8 bits (177), Expect = 2e-11 Identities = 36/91 (39%), Positives = 54/91 (59%) Frame = +2
Query: 380 PQHPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLA 559 P HPLDPLT EI++V T+L+ + S ++HA++L+EPDK+ V+ Sbjct: 39 PHHPLDPLTTPEIKRVQTILSGHDPGFGSG-----------STIIHAMALDEPDKQRVIR 87
Query: 560 WKKGDPMPTRKASVILMVGGTVYRIIVDLTS 652 WKKGD +P R+A ++ M G + + VDL S Sbjct: 88 WKKGDRLPPRRAEILAMSNGESHVLTVDLKS 118
>tr|Q9STI2|Q9STI2_ARATH Copper amine oxidase OS=Arabidopsis thaliana GN=T4C9.130 PE=3 SV=1 Length = 756
Score = 70.5 bits (171), Expect = 9e-11 Identities = 37/91 (40%), Positives = 54/91 (59%) Frame = +2
Query: 380 PQHPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLA 559 P HPLDPLT SEI ++ ++L++ ++ S LH V LEEP+K V Sbjct: 95 PNHPLDPLTVSEINKIRSILSSHALFT-----------SGTPHALHTVVLEEPEKNLVRH 143
Query: 560 WKKGDPMPTRKASVILMVGGTVYRIIVDLTS 652 W+KG+P+P RKASVI VG + + VD+++ Sbjct: 144 WEKGNPLPPRKASVIARVGADTHVLTVDIST 174
>tr|Q8L742|Q8L742_ARATH Copper amine oxidase OS=Arabidopsis thaliana PE=2 SV=1 Length = 741
Score = 70.5 bits (171), Expect = 9e-11 Identities = 37/91 (40%), Positives = 54/91 (59%) Frame = +2
Query: 380 PQHPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLA 559 P HPLDPLT SEI ++ ++L++ ++ S LH V LEEP+K V Sbjct: 80 PNHPLDPLTVSEINKIRSILSSHALFT-----------SGTPHALHTVVLEEPEKNLVRH 128
Query: 560 WKKGDPMPTRKASVILMVGGTVYRIIVDLTS 652 W+KG+P+P RKASVI VG + + VD+++ Sbjct: 129 WEKGNPLPPRKASVIARVGADTHVLTVDIST 159
>tr|A9T1S3|A9T1S3_PHYPA Copper amine oxidase OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_190773 PE=3 SV=1 Length = 689
Score = 65.5 bits (158), Expect = 3e-09 Identities = 33/92 (35%), Positives = 51/92 (55%) Frame = +2
Query: 386 HPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLAWK 565 HPLDPLT SE ++ L N + + + +LH++ L++P+K VL W+ Sbjct: 58 HPLDPLTTSEFLRIQETLRNKKLLGREKQ------------VLHSIELDDPEKHGVLQWE 105
Query: 566 KGDPMPTRKASVILMVGGTVYRIIVDLTSLIV 661 G+P+P R A VI G +RIIVD+ + +V Sbjct: 106 TGNPIPARCAEVISSYDGVPHRIIVDVDNRVV 137
>tr|A7R8C4|A7R8C4_VITVI Chromosome undetermined scaffold_2439, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00011290001 PE=3 SV=1 Length = 624
Score = 65.5 bits (158), Expect = 3e-09 Identities = 35/89 (39%), Positives = 51/89 (57%) Frame = +2
Query: 386 HPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLAWK 565 HPLDPL+ EI +V VL++ + + + ++SL+EP+K VL WK Sbjct: 69 HPLDPLSIQEINKVRAVLSSYGPFSSSFPA------------IQSLSLDEPEKSVVLGWK 116
Query: 566 KGDPMPTRKASVILMVGGTVYRIIVDLTS 652 KGDP+P RKA VI ++ G ++VDL S Sbjct: 117 KGDPLPPRKAFVIALLNGKTQVLLVDLDS 145
>tr|A7QYU4|A7QYU4_VITVI Chromosome undetermined scaffold_254, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010331001 PE=3 SV=1 Length = 720
Score = 65.5 bits (158), Expect = 3e-09 Identities = 35/89 (39%), Positives = 51/89 (57%) Frame = +2
Query: 386 HPLDPLTFSEIQQVHTVLTNSSVSAKTNRKYLRKAGSKLSILLHAVSLEEPDKEDVLAWK 565 HPLDPL+ EI +V VL++ + + + ++SL+EP+K VL WK Sbjct: 69 HPLDPLSIQEINKVRAVLSSYGPFSSSFPA------------IQSLSLDEPEKSVVLGWK 116
Query: 566 KGDPMPTRKASVILMVGGTVYRIIVDLTS 652 KGDP+P RKA VI ++ G ++VDL S Sbjct: 117 KGDPLPPRKAFVIALLNGKTQVLLVDLDS 145
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