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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960579
Clone id TST39A01NGRL0007_M20
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_M20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCGGCGTTTCTCTCTGCAGATTGTTCGCCATATCCTGATCAGCTTCTTGACGTGTGTCT
TTGACCTATTTTTGCTGCTTTGTGTTTGGCCTGATCAGGAGCCATGGATTTTGATGAGTA
TGAGTACCTTGAAAAGACCGTGGAGTCAGCAGACATGGTGAAAGGTTCTAATGGGTCCGC
GCCCCCGCCCCCGCCCAATAACAGGAGCGCCAAGAAGCGGAGATCAGGTGAAGAACGAGA
TGATGGTGAAGATGGTCACAGCAGGAGCAAACGCCATCGATCTGGTGAACTGGACAGGTC
TGATACAGATGAGCGTGAACACAGCCACAGAGACAAGTCCCGTGATCGTGACAGACACCG
TGATCGTGATCGCGACCGCGACCGATATATATCTGAACGGTCACACCGTGACCATGG
■■Homology search results ■■ -
sp_hit_id Q9XTQ7
Definition sp|Q9XTQ7|KE4L_CAEEL Putative Ke4-like protein tag-148 OS=Caenorhabditis elegans
Align length 25
Score (bit) 30.4
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960579|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M20, 5'
         (417 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XTQ7|KE4L_CAEEL Putative Ke4-like protein tag-148 OS=Caenor...    30   2.9  
sp|Q144E5|UREE_BURXL Urease accessory protein ureE OS=Burkholder...    30   3.8  
sp|Q92504|S39A7_HUMAN Zinc transporter SLC39A7 OS=Homo sapiens G...    30   3.8  
sp|Q4WC55|MYO1_ASPFU Myosin-1 OS=Aspergillus fumigatus GN=myoA P...    30   3.8  
sp|B0Y9Q4|MYO1_ASPFC Myosin-1 OS=Aspergillus fumigatus (strain C...    30   3.8  
sp|Q9LXS1|MTPA2_ARATH Metal tolerance protein A2 OS=Arabidopsis ...    30   3.8  
sp|Q9ZT63|MTP1_ARATH Metal tolerance protein 1 OS=Arabidopsis th...    30   3.8  
sp|P43424|GALT_RAT Galactose-1-phosphate uridylyltransferase OS=...    30   3.8  
sp|Q03249|GALT_MOUSE Galactose-1-phosphate uridylyltransferase O...    30   3.8  
sp|A1TSZ8|UREE_ACIAC Urease accessory protein ureE OS=Acidovorax...    30   4.9  
sp|A1C4A5|MYO1_ASPCL Myosin-1 OS=Aspergillus clavatus GN=myoA PE...    30   4.9  
sp|Q4IRI9|CWC25_GIBZE Pre-mRNA-splicing factor CWC25 OS=Gibberel...    30   4.9  
sp|A5PMX1|ZNT7_DANRE Zinc transporter 7 OS=Danio rerio GN=slc30a...    29   6.4  
sp|Q6PCB0|VWA1_HUMAN von Willebrand factor A domain-containing p...    29   6.4  
sp|Q5RFD5|S39A7_PONAB Zinc transporter SLC39A7 OS=Pongo abelii G...    29   6.4  
sp|P55066|NCAN_MOUSE Neurocan core protein OS=Mus musculus GN=Nc...    29   6.4  
sp|A1DBH2|MYO1_NEOFI Myosin-1 OS=Neosartorya fischeri (strain AT...    29   6.4  
sp|Q2US45|MYO1_ASPOR Myosin-1 OS=Aspergillus oryzae GN=myoA PE=3...    29   6.4  
sp|Q5PQQ8|ITGBL_RAT Integrin beta-like protein 1 OS=Rattus norve...    29   6.4  
sp|P07902|GALT_HUMAN Galactose-1-phosphate uridylyltransferase O...    29   6.4  
sp|Q9PUB8|S39A7_DANRE Zinc transporter Slc39a7 (Fragment) OS=Dan...    29   8.4  
sp|Q8R534|ADM1B_MOUSE Disintegrin and metalloproteinase domain-c...    29   8.4  
sp|Q60813|ADM1A_MOUSE Disintegrin and metalloproteinase domain-c...    29   8.4  

>sp|Q9XTQ7|KE4L_CAEEL Putative Ke4-like protein tag-148
           OS=Caenorhabditis elegans GN=tag-148 PE=1 SV=2
          Length = 462

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -2

Query: 383 GRGRDHDHGVCHDHGTCLCGCVHAH 309
           G   DHDHG  HDHG       HAH
Sbjct: 79  GHAHDHDHGHAHDHG-------HAH 96


>sp|Q144E5|UREE_BURXL Urease accessory protein ureE OS=Burkholderia
           xenovorans (strain LB400) GN=ureE PE=3 SV=1
          Length = 225

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
 Frame = -2

Query: 416 HGHGVTVQIYIGRGRDHDHGVCHDHGTCL----CGCVHAH 309
           HGH      +   G DH HG  HDHG  +    CG  H H
Sbjct: 182 HGHSHAAHEH-SHGHDHTHGHDHDHGDHVHDESCGHGHHH 220


>sp|Q92504|S39A7_HUMAN Zinc transporter SLC39A7 OS=Homo sapiens
           GN=SLC39A7 PE=1 SV=2
          Length = 469

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -2

Query: 416 HGHGVTVQ-IYIGRGRDHDHGVCHD---HGTCLCGCVHAHLY 303
           HGHG T + I+ G   DHDHG  H+   HG       H+H Y
Sbjct: 62  HGHGHTHESIWHGHTHDHDHGHSHEDLHHG-------HSHGY 96


>sp|Q4WC55|MYO1_ASPFU Myosin-1 OS=Aspergillus fumigatus GN=myoA PE=3
            SV=2
          Length = 1249

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 105  WILMSMSTLKRPWSQQTW--*KVLMGPRPRPRPITGAPRS 218
            W+ M+M+T  + W+ + +   +V   P+P P P   APRS
Sbjct: 1114 WLCMNMTTSAQGWTPEAYLEEQVAPTPKPAPPPPPAAPRS 1153


>sp|B0Y9Q4|MYO1_ASPFC Myosin-1 OS=Aspergillus fumigatus (strain CEA10
            / CBS 144.89 / FGSC A1163) GN=myoA PE=3 SV=2
          Length = 1249

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 105  WILMSMSTLKRPWSQQTW--*KVLMGPRPRPRPITGAPRS 218
            W+ M+M+T  + W+ + +   +V   P+P P P   APRS
Sbjct: 1114 WLCMNMTTSAQGWTPEAYLEEQVAPTPKPAPPPPPAAPRS 1153


>sp|Q9LXS1|MTPA2_ARATH Metal tolerance protein A2 OS=Arabidopsis
           thaliana GN=MTPA2 PE=2 SV=1
          Length = 378

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 416 HGHGVTVQIYIGRGRDHDHGVCHDHGTCLCGCVHAH 309
           HGHG       G   D+ HG  HDHG  +    H H
Sbjct: 185 HGHGH------GHSHDNGHGHSHDHGHGIAATEHHH 214


>sp|Q9ZT63|MTP1_ARATH Metal tolerance protein 1 OS=Arabidopsis
           thaliana GN=MTP1 PE=1 SV=2
          Length = 398

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 416 HGHGVTVQIYIGRGRDHDHGVCHDHG 339
           H HGVTV  +     DH+HG  H HG
Sbjct: 201 HSHGVTVTTH-HHHHDHEHGHSHGHG 225


>sp|P43424|GALT_RAT Galactose-1-phosphate uridylyltransferase
           OS=Rattus norvegicus GN=Galt PE=2 SV=1
          Length = 379

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +3

Query: 90  PDQEPWILMSMSTLKRPWSQQTW*KVLMGPRPRPRPIT----GAPRSGDQV 230
           P Q+ W+L+S   +KRPW  Q     L+   PR  P+     GA R+  +V
Sbjct: 36  PLQDEWVLVSAHRMKRPWQGQVE-PQLLKTVPRHDPLNPLCPGATRANGEV 85


>sp|Q03249|GALT_MOUSE Galactose-1-phosphate uridylyltransferase
           OS=Mus musculus GN=Galt PE=2 SV=3
          Length = 379

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +3

Query: 90  PDQEPWILMSMSTLKRPWSQQTW*KVLMGPRPRPRPIT----GAPRSGDQV 230
           P Q+ W+L+S   +KRPW  Q     L+   PR  P+     GA R+  +V
Sbjct: 36  PLQDEWVLVSAHRMKRPWQGQVE-PQLLKTVPRHDPLNPLCPGATRANGEV 85


>sp|A1TSZ8|UREE_ACIAC Urease accessory protein ureE OS=Acidovorax
           avenae subsp. citrulli (strain AAC00-1) GN=ureE PE=3
           SV=1
          Length = 210

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 416 HGHGVTVQIYIGRGRDHDHGVCHDHGTCLCGCVHAH 309
           HGHG     +      HDH   H HGT  C   H+H
Sbjct: 154 HGHG---HDHPHHDHGHDHAHAHAHGTEACDHEHSH 186
tr_hit_id Q9ZVW9
Definition tr|Q9ZVW9|Q9ZVW9_ARATH Putative splicing factor (At2g16940) OS=Arabidopsis thaliana
Align length 79
Score (bit) 43.5
E-value 0.005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960579|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_M20, 5'
         (417 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9ZVW9|Q9ZVW9_ARATH Putative splicing factor (At2g16940) OS=A...    44   0.005
tr|Q8LE50|Q8LE50_ARATH Putative splicing factor OS=Arabidopsis t...    44   0.005
tr|Q10RM6|Q10RM6_ORYSJ Transposon protein, putative, CACTA, En/S...    42   0.020
tr|Q0DV27|Q0DV27_ORYSJ Os03g0153000 protein OS=Oryza sativa subs...    42   0.020
tr|B8ANW8|B8ANW8_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.020
tr|A3AE82|A3AE82_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.020
tr|A7PKX0|A7PKX0_VITVI Chromosome chr7 scaffold_20, whole genome...    40   0.058
tr|A5AQI8|A5AQI8_VITVI Putative uncharacterized protein OS=Vitis...    39   0.13 
tr|A2Z7T0|A2Z7T0_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.22 
tr|Q1LS65|Q1LS65_RALME Cobalamin synthesis CobW-like protein OS=...    37   0.64 
tr|A7P8E1|A7P8E1_VITVI Chromosome chr3 scaffold_8, whole genome ...    37   0.64 
tr|B7FLL5|B7FLL5_MEDTR Putative uncharacterized protein OS=Medic...    35   2.4  
tr|B6UEZ9|B6UEZ9_MAIZE Putative uncharacterized protein OS=Zea m...    35   2.4  
tr|A3C546|A3C546_ORYSJ Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|B2ATC5|B2ATC5_PODAN Predicted CDS Pa_1_15390 OS=Podospora ans...    34   3.2  
tr|A7AZS5|A7AZS5_RUMGN Putative uncharacterized protein OS=Rumin...    34   4.1  
tr|Q6FMK2|Q6FMK2_CANGA Strain CBS138 chromosome K complete seque...    33   5.4  
tr|Q2RT46|Q2RT46_RHORT Nucleoside recognition OS=Rhodospirillum ...    33   7.1  
tr|Q9FIB8|Q9FIB8_ARATH Splicing factor-like protein OS=Arabidops...    33   7.1  
tr|Q93Y25|Q93Y25_ARATH Splicing factor-like protein OS=Arabidops...    33   7.1  
tr|Q84WH4|Q84WH4_ARATH Splicing factor-like protein OS=Arabidops...    33   7.1  
tr|B0P445|B0P445_9CLOT Putative uncharacterized protein OS=Clost...    33   9.2  
tr|B4FWC4|B4FWC4_MAIZE Putative uncharacterized protein OS=Zea m...    33   9.2  
tr|A6S6C7|A6S6C7_BOTFB Putative uncharacterized protein OS=Botry...    33   9.2  

>tr|Q9ZVW9|Q9ZVW9_ARATH Putative splicing factor (At2g16940)
           OS=Arabidopsis thaliana GN=At2g16940 PE=2 SV=2
          Length = 561

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 31/79 (39%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSG-------EERDDGEDGHS 262
           MDFDEYEYLEKTVE+  +                      S        +ERD+ EDG  
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGR- 59

Query: 263 RSKRHRSGELDRSDTDERE 319
           RSKR RS    RS   ER+
Sbjct: 60  RSKRSRSHHRSRSRDRERD 78


>tr|Q8LE50|Q8LE50_ARATH Putative splicing factor OS=Arabidopsis
           thaliana PE=2 SV=1
          Length = 560

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 31/79 (39%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSG-------EERDDGEDGHS 262
           MDFDEYEYLEKTVE+  +                      S        +ERD+ EDG  
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGR- 59

Query: 263 RSKRHRSGELDRSDTDERE 319
           RSKR RS    RS   ER+
Sbjct: 60  RSKRSRSHHRSRSRDRERD 78


>tr|Q10RM6|Q10RM6_ORYSJ Transposon protein, putative, CACTA, En/Spm
           sub-class, expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g05830 PE=4 SV=1
          Length = 566

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSG----EERDDGEDGHSRSK 271
           MDFDEY+YLEKTVE +                         G    EERDDGE    RSK
Sbjct: 1   MDFDEYDYLEKTVEGSGAPSNGAAAPRSEEKERSSRRRSGGGGGGDEERDDGE---RRSK 57

Query: 272 RHRSGELDRSDTDE 313
           R RS E    D D+
Sbjct: 58  RSRSEENRDRDKDK 71


>tr|Q0DV27|Q0DV27_ORYSJ Os03g0153000 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0153000 PE=4 SV=1
          Length = 606

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSG----EERDDGEDGHSRSK 271
           MDFDEY+YLEKTVE +                         G    EERDDGE    RSK
Sbjct: 1   MDFDEYDYLEKTVEGSGAPSNGAAAPRSEEKERSSRRRSGGGGGGDEERDDGE---RRSK 57

Query: 272 RHRSGELDRSDTDE 313
           R RS E    D D+
Sbjct: 58  RSRSEENRDRDKDK 71


>tr|B8ANW8|B8ANW8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_10059 PE=4 SV=1
          Length = 567

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSG----EERDDGEDGHSRSK 271
           MDFDEY+YLEKTVE +                         G    EERDDGE    RSK
Sbjct: 1   MDFDEYDYLEKTVEGSGAPSNGAAAPRSEEKERSSRRRSGGGGGGDEERDDGE---RRSK 57

Query: 272 RHRSGELDRSDTDE 313
           R RS E    D D+
Sbjct: 58  RSRSEENRDRDKDK 71


>tr|A3AE82|A3AE82_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_009104 PE=4 SV=1
          Length = 603

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSG----EERDDGEDGHSRSK 271
           MDFDEY+YLEKTVE +                         G    EERDDGE    RSK
Sbjct: 1   MDFDEYDYLEKTVEGSGAPSNGAAAPRSEEKERSSRRRSGGGGGGDEERDDGE---RRSK 57

Query: 272 RHRSGELDRSDTDE 313
           R RS E    D D+
Sbjct: 58  RSRSEENRDRDKDK 71


>tr|A7PKX0|A7PKX0_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019345001
           PE=4 SV=1
          Length = 539

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSGEERDDGEDGHS-RSKRHR 280
           MDFDEYEYLEK VE  +                        GEE DD E G   RSKR R
Sbjct: 1   MDFDEYEYLEKAVEEPE----NRKKKDGGEKSERSYRKREGGEEDDDDERGEGRRSKRSR 56

Query: 281 SGELDRSDTDERE 319
             EL+    +  E
Sbjct: 57  GEELNGERRERHE 69


>tr|A5AQI8|A5AQI8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002664 PE=4 SV=1
          Length = 461

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 27/66 (40%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSGEERDDGEDGHS-RSKRHR 280
           MDFDEYEYLEK VE  +                        GEE DD E G   RSKR  
Sbjct: 1   MDFDEYEYLEKAVEEPE----NRKKKDGGEKSERSYRKREGGEEDDDDERGEGRRSKRRE 56

Query: 281 SGELDR 298
             E DR
Sbjct: 57  RHEKDR 62


>tr|A2Z7T0|A2Z7T0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_33765 PE=4 SV=1
          Length = 549

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 29/69 (42%), Positives = 31/69 (44%)
 Frame = +2

Query: 104 MDFDEYEYLEKTVESADMVXXXXXXXXXXXXXXXXXXXXXSGEERDDGEDGHSRSKRHRS 283
           M+FDEYEYLEKTVE +                        SG  RDD E G   SKR RS
Sbjct: 1   MEFDEYEYLEKTVEPS-----APSTNGSGEKDRAGSRRRSSGGGRDDEERG---SKRSRS 52

Query: 284 GELDRSDTD 310
           GE    D D
Sbjct: 53  GEDRDRDRD 61


>tr|Q1LS65|Q1LS65_RALME Cobalamin synthesis CobW-like protein
           OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
           DSM 2839) GN=Rmet_0125 PE=4 SV=1
          Length = 391

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = -2

Query: 371 DHDHGVCHDHGTCLCGCVHAH 309
           DHDHG  HDHG   C C HAH
Sbjct: 371 DHDHGHDHDHGDGPCDCGHAH 391