DK960587 |
Clone id |
TST39A01NGRL0007_N04 |
Library |
TST39 |
Length |
624 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_N04. 5' end sequence. |
Accession |
DK960587 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL13Contig1 |
Sequence |
AGAAGTTGGAGTGCTGCGCGGCCAAGCTCAGATCCAGGTATTGGGTGTACCTCTGTAAAG GATTTTTACATTGGGAGTAGTTTTACAAGTCAGCCAAAATGGTGAAGTTTACAACTGAAG AGCTGCGTAGGATCATGGACAAGAAGAACAACATTAGGAATATGTCTGTTATCGCCCATG TGGATCATGGGAAATCTACCTTAACAGACTCTCTTGTGGCTGCTGCTGGTATCATTGCTC AAGAGGTCGCTGGAGATGTGCGCCTGACAGACACCCGTCAAGATGAGGCTGAACGTGGCA TTACCATCAAATCTACTGGGATCTCCCTGTACTATGAAATGTCTGAAAAATCTTTGAAAG ATTACAAGGGTGAGAAGGATGGGAATGACTACTTGATTAATCTAATTGATTCTCCGGGCC ATGTCGACTTTTCTTCGGAGGTTACTGCAGCTTTGCGCATCACAGATGGTGCCTTGGTGG TGGTAGATTGTGTGGAGGGTGTCTGTGTGCAGACTGAAACTGTCCTTCGACAGGCTCTGG GTGAGAGGATCAGGCCTGTTCTTACAGTCAACAAAATGGACAGGTGCTTTCTTGAGCTAC AGGTTGAAGGTGAAGAGGCGTATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23755 |
Definition |
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris |
Align length |
175 |
Score (bit) |
287.0 |
E-value |
3.0e-77 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XTK1 |
Definition |
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica |
Align length |
175 |
Score (bit) |
300.0 |
E-value |
6.0e-80 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960587|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_N04, 5' (624 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subs... 300 6e-80 tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subs... 300 6e-80 tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H06... 300 6e-80 tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza... 300 6e-80 tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 299 8e-80 tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella paten... 299 8e-80 tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 299 1e-79 tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert seque... 293 4e-78 tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 293 4e-78 tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella paten... 293 4e-78 tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza... 293 6e-78 tr|Q9ASR1|Q9ASR1_ARATH At1g56070/T6H22_13 (Putative elongation f... 288 1e-76 tr|Q9SGT4|Q9SGT4_ARATH Elongation factor EF-2 OS=Arabidopsis tha... 286 5e-76 tr|A9SYQ7|A9SYQ7_PHYPA Predicted protein OS=Physcomitrella paten... 284 3e-75 tr|A2ZXD6|A2ZXD6_ORYSJ Putative uncharacterized protein OS=Oryza... 278 1e-73 tr|Q8W0C4|Q8W0C4_ORYSJ cDNA clone:J033048F11, full insert sequen... 275 2e-72 tr|A2WUL5|A2WUL5_ORYSI Putative uncharacterized protein OS=Oryza... 275 2e-72 tr|A8JHX9|A8JHX9_CHLRE Elongation factor 2 OS=Chlamydomonas rein... 272 1e-71 tr|A7PWR7|A7PWR7_VITVI Chromosome chr19 scaffold_35, whole genom... 252 1e-65 tr|A4SB22|A4SB22_OSTLU Predicted protein OS=Ostreococcus lucimar... 251 3e-65 tr|Q52MA1|Q52MA1_XENLA Putative uncharacterized protein OS=Xenop... 233 7e-60 tr|Q8BMA8|Q8BMA8_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60 tr|Q60423|Q60423_CRIGR Elongation factor 2 OS=Cricetulus griseus... 233 7e-60 tr|Q3UDC8|Q3UDC8_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60 tr|Q3UBL9|Q3UBL9_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60 tr|Q3TX47|Q3TX47_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60 tr|Q3TW58|Q3TW58_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60 tr|Q3TLB1|Q3TLB1_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60 tr|Q3TK17|Q3TK17_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60 tr|Q3TJZ1|Q3TJZ1_MOUSE Putative uncharacterized protein OS=Mus m... 233 7e-60
>tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020P07.3 PE=2 SV=2 Length = 843
Score = 300 bits (767), Expect = 6e-80 Identities = 155/175 (88%), Positives = 161/175 (92%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 175
>tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subsp. japonica GN=P0461D06.32 PE=2 SV=1 Length = 843
Score = 300 bits (767), Expect = 6e-80 Identities = 155/175 (88%), Positives = 161/175 (92%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 175
>tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H0613H07.5 PE=4 SV=1 Length = 843
Score = 300 bits (767), Expect = 6e-80 Identities = 155/175 (88%), Positives = 161/175 (92%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 175
>tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07431 PE=4 SV=1 Length = 843
Score = 300 bits (767), Expect = 6e-80 Identities = 155/175 (88%), Positives = 161/175 (92%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 175
>tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217194 PE=4 SV=1 Length = 451
Score = 299 bits (766), Expect = 8e-80 Identities = 154/175 (88%), Positives = 161/175 (92%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 175
>tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189887 PE=4 SV=1 Length = 843
Score = 299 bits (766), Expect = 8e-80 Identities = 154/175 (88%), Positives = 161/175 (92%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 175
>tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 Length = 843
Score = 299 bits (765), Expect = 1e-79 Identities = 154/175 (88%), Positives = 160/175 (91%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTAEELRAIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 DEAERGITIKSTGISLYYEM+++SLK+YKGE+DGN YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMTDESLKNYKGERDGNQYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 175
>tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0439E07.16 PE=2 SV=1 Length = 826
Score = 293 bits (751), Expect = 4e-78 Identities = 149/175 (85%), Positives = 160/175 (91%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQV GEEAY Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAY 175
>tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228450 PE=4 SV=1 Length = 545
Score = 293 bits (751), Expect = 4e-78 Identities = 152/175 (86%), Positives = 158/175 (90%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKF+ EELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSAEELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 QDEA+RGITIKSTGISLYYEM+ +SLKDY GEKDG DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTSESLKDYHGEKDGCDYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQV+GEEAY Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAY 175
>tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109208 PE=4 SV=1 Length = 843
Score = 293 bits (751), Expect = 4e-78 Identities = 152/175 (86%), Positives = 158/175 (90%) Frame = +3
Query: 99 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 278 MVKF+ EELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSAEELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 279 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 458 QDEA+RGITIKSTGISLYYEM+ +SLKDY GEKDG DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTSESLKDYHGEKDGCDYLINLIDSPGHVDFSSEVTAALR 120
Query: 459 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAY 623 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQV+GEEAY Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAY 175
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