DK960602 |
Clone id |
TST39A01NGRL0007_N21 |
Library |
TST39 |
Length |
711 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_N21. 5' end sequence. |
Accession |
DK960602 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
ATCTTTTCGCAGGGGAAAGAGAAAGCTTGGTTGCAGAGACCGTCGGGACGCCATGGCTGC AGCTACCGCATCCTCCCTCACGGCCGCCTGTGTCTCCTCCCTCTCTGCCCACTCCTCCAC CTCCCCTGCCCCAGATCACATCAATTGCTCCTCTCCTTTCGCCAAATTCTCGGGTCTCAA GCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGAAGAAGAAGAGAAGCAGTGG CAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGGAGGCTCCCCCCAAGACCGA TGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCTTGGCCGTTGATGCAGTTGA GAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCGATGGGCCACATTCT GTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATTGGTTCAATCGCGACAGGTT CGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTTCATCTTGCCGGCTA CGACAGCGTCCAGGAGGAAGATCTGAAGCAATTCAGGCAATGGGAGAGCCGAACTCCTGG GCATCCTGAAAACTTTGAGACGCCTGGTGTGGAGGTTACTACAGGGCCCCTTGGCCAAGG TATTTGCAATGCCGTTGGATTAGCTCTGGCCGAGAAGCACCTGGGCTGCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
185 |
Score (bit) |
273.0 |
E-value |
7.0e-73 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960602|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_N21, 5' (711 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 273 7e-73 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 270 4e-72 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 267 4e-71 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 253 7e-67 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 237 5e-62 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 224 5e-58 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 184 4e-46 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 180 6e-45 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 177 7e-44 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 176 1e-43 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 176 1e-43 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 174 3e-43 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 172 2e-42 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 171 4e-42 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 171 4e-42 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 171 5e-42 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 171 5e-42 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 170 8e-42 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 169 1e-41 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 169 1e-41 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 169 1e-41 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 169 1e-41 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 169 1e-41 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 169 1e-41 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 169 2e-41 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 168 2e-41 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 168 3e-41 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 167 5e-41 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 166 2e-40 sp|P21725|TKTC_RALEH Transketolase, chromosomal OS=Ralstonia eut... 165 2e-40
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 273 bits (698), Expect = 7e-73 Identities = 134/185 (72%), Positives = 149/185 (80%) Frame = +2
Query: 149 SSPFAKFSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSIN 328 S F+ FSGLK S+P S H + ++ ++ TD ++VEKS+N Sbjct: 30 SLSFSTFSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVN 86
Query: 329 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCM 508 TIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCM Sbjct: 87 TIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCM 146
Query: 509 LQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLAL 688 LQYALLHLAGYDSVQE+DLK FRQW SR PGHPENFETPGVEVTTGPLGQGI NAVGLA+ Sbjct: 147 LQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLGQGIANAVGLAV 206
Query: 689 AEKHL 703 AEKHL Sbjct: 207 AEKHL 211
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 270 bits (691), Expect = 4e-72 Identities = 124/132 (93%), Positives = 130/132 (98%) Frame = +2
Query: 308 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 487 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 488 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 667 SAGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTTGPLGQGI Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIA 134
Query: 668 NAVGLALAEKHL 703 NAVGLALAEKHL Sbjct: 135 NAVGLALAEKHL 146
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 267 bits (683), Expect = 4e-71 Identities = 127/137 (92%), Positives = 130/137 (94%), Gaps = 1/137 (0%) Frame = +2
Query: 296 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 472 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 473 DRFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPL 652 DRFVLSAGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHPENFETPGVEVTTGPL Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPL 194
Query: 653 GQGICNAVGLALAEKHL 703 GQGI NAVGLALAEKHL Sbjct: 195 GQGIANAVGLALAEKHL 211
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 253 bits (646), Expect = 7e-67 Identities = 115/132 (87%), Positives = 124/132 (93%) Frame = +2
Query: 308 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 487 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 488 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 667 SAGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HPENFETPGVEVTTGPLGQGI Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLGQGIA 132
Query: 668 NAVGLALAEKHL 703 +AVGLA+AEKHL Sbjct: 133 SAVGLAVAEKHL 144
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 237 bits (604), Expect = 5e-62 Identities = 108/133 (81%), Positives = 119/133 (89%) Frame = +2
Query: 308 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 487 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 488 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 667 SAGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HPENFETPGVEVTTGPLGQG+ Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLGQGVG 136
Query: 668 NAVGLALAEKHLG 706 +AVGLALAEKHLG Sbjct: 137 SAVGLALAEKHLG 149
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 224 bits (570), Expect = 5e-58 Identities = 106/133 (79%), Positives = 114/133 (85%) Frame = +2
Query: 305 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 484 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 485 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 664 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTTGPLGQGI Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLGQGI 126
Query: 665 CNAVGLALAEKHL 703 N VGLA+AE HL Sbjct: 127 ANGVGLAIAEAHL 139
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 184 bits (467), Expect = 4e-46 Identities = 85/128 (66%), Positives = 103/128 (80%) Frame = +2
Query: 320 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 499 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 500 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVG 679 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TTGPLGQG+ AVG Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLGQGVAMAVG 127
Query: 680 LALAEKHL 703 +A+AE+HL Sbjct: 128 MAMAERHL 135
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 180 bits (457), Expect = 6e-45 Identities = 84/133 (63%), Positives = 106/133 (79%) Frame = +2
Query: 305 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 484 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 485 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 664 LSAGHG L Y++LHL+G+D + EDLK FRQW S+TPGHPE T GV+ TTGPLGQGI Sbjct: 63 LSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGI 121
Query: 665 CNAVGLALAEKHL 703 AVG+A+AE+HL Sbjct: 122 AMAVGMAIAERHL 134
>sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 SV=2 Length = 668
Score = 177 bits (448), Expect = 7e-44 Identities = 80/130 (61%), Positives = 104/130 (80%) Frame = +2
Query: 314 EKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSA 493 ++ N IRFLA+DAVE ANSGHPGLPMG A + +L+ ++++Y+P P+W +RDRFVLSA Sbjct: 13 DRLANAIRFLAIDAVEAANSGHPGLPMGAADIATVLFTKVLKYDPSRPFWPDRDRFVLSA 72
Query: 494 GHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNA 673 GHG ML Y++LHLAGY+ V +++K+FRQ S TPGHPENF T G+E TTGPLGQGI A Sbjct: 73 GHGSMLLYSVLHLAGYEKVTIDEIKRFRQLGSLTPGHPENFVTEGIETTTGPLGQGIATA 132
Query: 674 VGLALAEKHL 703 VG+A+AE+ L Sbjct: 133 VGMAMAERLL 142
>sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes serotype M18 GN=tkt PE=3 SV=1 Length = 729
Score = 176 bits (445), Expect = 1e-43 Identities = 83/129 (64%), Positives = 101/129 (78%), Gaps = 1/129 (0%) Frame = +2
Query: 320 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPY-WFNRDRFVLSAG 496 ++NT+R L++DA++ ANSGHPGLPMG APM ++L++ M NPK W NRDRF+LSAG Sbjct: 78 AVNTVRTLSMDAIQAANSGHPGLPMGAAPMAYVLWNHFMNINPKTSRNWSNRDRFILSAG 137
Query: 497 HGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAV 676 HG + Y+LLHLAGYD + EDLK FRQW S+TPGHPE T GVE TTGPLGQGI NAV Sbjct: 138 HGSAMLYSLLHLAGYD-LSVEDLKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAV 196
Query: 677 GLALAEKHL 703 G+A+AE HL Sbjct: 197 GMAMAEAHL 205
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
179 |
Score (bit) |
278.0 |
E-value |
2.0e-73 |
Report |
|