DK960604
Clone id TST39A01NGRL0007_N23
Library
Length 675
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_N23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTTCTGATGGAAAGCTTTGCAACCCCCTATCCGCTGATCTTCTTTGACGGCGAGCAAGA
GCAAGACAAAGGATTTGTGGGCATACATTCTGTGCTCACTTTCAAACGCTTTCAGTCTCT
GCTTAGTCAGAAGACAGGAATCTCTCCTAATCAACTCTCGACAGTGTTCGTGTGTCGGAA
AACTCTGAAAGGTTCAGAAAAGAAGCAAAGGCTTCCCATCAATGGGAACACAAACTTCAA
CATTCTTTTGAATCAGCACAATCCCACTAAGGAGAGAGATTGTTACTTTCTGGTATCTGT
GAAGAGGTCGAAGAAGGAGCGGAAAGGATCGAGAAAGAGAGGTGCAGAGTCGGAGATGCC
CGAGGACTGGGACATTAACAATTACATCGCTGCTGTGGAAGGTAATGGCCATTTCAACAA
TCCTTCAATGGAAGAGACATTATCGCAAGGTTCAGCAGGCTCAGCAGAAACAAAAGCTTC
TTTTATGAGGATCACATTTCCAAACCATCATGCTGATAATGGCCTAGATAGCAACAGAGC
AACAGATAACAAGGCCGATAGAGTGATATTAAAGAGGAGCAATACCTCTTTCCTCCAAAA
GCATGGCTGGAACCAGGGGGAGCGGCAACCTTCTCAGCAAGCTGGTGGTTTTCTACCTGA
TGAGTATGTGCAGCT
■■Homology search results ■■ -
sp_hit_id Q9M354
Definition sp|Q9M354|AGD6_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana
Align length 83
Score (bit) 31.2
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960604|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_N23, 5'
(675 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9M354|AGD6_ARATH Probable ADP-ribosylation factor GTPase-act... 31 5.2
sp|P43096|CARP7_CANAL Candidapepsin-7 OS=Candida albicans GN=SAP... 30 8.9

>sp|Q9M354|AGD6_ARATH Probable ADP-ribosylation factor
GTPase-activating protein AGD6 OS=Arabidopsis thaliana
GN=AGD6 PE=2 SV=1
Length = 459

Score = 31.2 bits (69), Expect = 5.2
Identities = 17/83 (20%), Positives = 32/83 (38%)
Frame = +2

Query: 398 EGNGHFNNPSMEETLSQGSAGSAETKASFMRITFPNHHADNGLDSNRATDNKADRVILKR 577
EGNG++ N + S G ++S + N N DS +NK + +
Sbjct: 347 EGNGYYQNFGNGNKAANSSVGGGRPQSSSTSGHYNNSQNSNSWDSWGENENKKTEAVAPK 406

Query: 578 SNTSFLQKHGWNQGERQPSQQAG 646
+++ GW + ++ G
Sbjct: 407 GSSASNDDDGWTGWDDHDAKDDG 429


>sp|P43096|CARP7_CANAL Candidapepsin-7 OS=Candida albicans GN=SAP7
PE=3 SV=1
Length = 588

Score = 30.4 bits (67), Expect = 8.9
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2

Query: 371 DINNYIAAVEGNGHFNNPSMEETLSQGSAGSAETKASFMRITFPNHHADNGLDSNRATDN 550
D+N I + GNG F+ S++ T S G+ S + ++ P+ A G + +TDN
Sbjct: 59 DVNQIIQPIFGNGIFSGGSIQGTHS-GNGHSVK-----YEVSLPSSSAQKGSNGPSSTDN 112

Query: 551 K 553
K
Sbjct: 113 K 113


tr_hit_id A9S9N0
Definition tr|A9S9N0|A9S9N0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 233
Score (bit) 171.0
E-value 5.0e-41
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960604|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_N23, 5'
(675 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S9N0|A9S9N0_PHYPA Predicted protein OS=Physcomitrella paten... 171 5e-41
tr|Q259M7|Q259M7_ORYSA H0723C07.4 protein OS=Oryza sativa GN=H07... 37 0.87
tr|Q0J8V2|Q0J8V2_ORYSJ Os04g0685700 protein OS=Oryza sativa subs... 37 0.87
tr|Q7RDQ0|Q7RDQ0_PLAYO Putative uncharacterized protein PY05371 ... 36 2.5
tr|B3L483|B3L483_PLAKH Protein kinase, putative OS=Plasmodium kn... 35 3.3
tr|Q229C4|Q229C4_TETTH Putative uncharacterized protein OS=Tetra... 34 7.4

>tr|A9S9N0|A9S9N0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_163644 PE=4 SV=1
Length = 472

Score = 171 bits (432), Expect = 5e-41
Identities = 99/233 (42%), Positives = 133/233 (57%), Gaps = 16/233 (6%)
Frame = +2

Query: 8 MESFATPYPLIFFDGEQEQDKGFVGIHSVLTFKRFQSLLSQKTGISPNQLSTVFVCRKTL 187
MESFATPYP++F DG+QE DKG VG+HSVL+FKRFQ+L+SQKTGI NQLS VFVCR+TL
Sbjct: 1 MESFATPYPVVFCDGDQEHDKGVVGVHSVLSFKRFQALMSQKTGIPANQLSAVFVCRRTL 60

Query: 188 KGSEKKQRLPINGNTNFNILLNQHNPTKERDCYFLVSVXXXXXXXXXXXXXXAESEMPED 367
K ++K+Q+LPIN NTNFNI+LNQHNP++E+DC+FLVS+ AE+E +D
Sbjct: 61 KDTDKRQKLPINENTNFNIILNQHNPSREKDCHFLVSIKKSKKERKGTRKRNAEAENADD 120

Query: 368 WDINNYIAAVEGNGHFNNP--SMEETLS----------QGSAGSAETKASFMRITFPNHH 511
D N+ + P EE S Q S+ T + ++
Sbjct: 121 EDSNSSRGDSSPSDERPKPGCGTEEPFSPHSTLPPAYLQRSSSPPATPSPNANGQRISNS 180

Query: 512 ADNGLDSNRATDNKADRVILKR----SNTSFLQKHGWNQGERQPSQQAGGFLP 658
+ NG + A + K +R +L+R N + GW G + G LP
Sbjct: 181 SPNGKVTMTAAEGKVERTLLRREGKGQNGFASPRAGWQNGGMLNQRVEGFCLP 233


>tr|Q259M7|Q259M7_ORYSA H0723C07.4 protein OS=Oryza sativa
GN=H0723C07.4 PE=4 SV=1
Length = 281

Score = 37.4 bits (85), Expect = 0.87
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = +2

Query: 20 ATPYPLIFFDGEQEQDKGFVGIHSVLTFKRFQSLLSQKTGISPNQLSTVFVCRKTLKGSE 199
A P++F DG+Q D G V + L ++ Q++++ + G++P Q+ +L
Sbjct: 11 AAVLPVVFVDGDQTVDLGTVTVQPSLGVRKLQAVVADRVGLAPQQILA------SLARPR 64

Query: 200 KKQRLPINGNTN 235
+ +R+P+ T+
Sbjct: 65 RARRVPLEEGTD 76


>tr|Q0J8V2|Q0J8V2_ORYSJ Os04g0685700 protein OS=Oryza sativa subsp.
japonica GN=Os04g0685700 PE=4 SV=1
Length = 281

Score = 37.4 bits (85), Expect = 0.87
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = +2

Query: 20 ATPYPLIFFDGEQEQDKGFVGIHSVLTFKRFQSLLSQKTGISPNQLSTVFVCRKTLKGSE 199
A P++F DG+Q D G V + L ++ Q++++ + G++P Q+ +L
Sbjct: 11 AAVLPVVFVDGDQTVDLGTVTVQPSLGVRKLQAVVADRVGLAPQQILA------SLARPR 64

Query: 200 KKQRLPINGNTN 235
+ +R+P+ T+
Sbjct: 65 RARRVPLEEGTD 76


>tr|Q7RDQ0|Q7RDQ0_PLAYO Putative uncharacterized protein PY05371
OS=Plasmodium yoelii yoelii GN=PY05371 PE=4 SV=1
Length = 1730

Score = 35.8 bits (81), Expect = 2.5
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2

Query: 143 SPNQLSTVFVCRKTLKGSEKKQRLPINGNTNFNILLNQHNPTKERD 280
S N + + ++C K+ +G K +L N N N +IL + PT E+D
Sbjct: 308 SENNIKSKYICEKSDEGINKSLKLNYNKNCNHSILSHDSVPTNEKD 353


>tr|B3L483|B3L483_PLAKH Protein kinase, putative OS=Plasmodium
knowlesi (strain H) GN=PKH_082860 PE=4 SV=1
Length = 2827

Score = 35.4 bits (80), Expect = 3.3
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = +1

Query: 73 ICGHTFCAHFQTLSVSA*SEDRNLS*STLDSVRVSENSERFRKEAKASHQWEHKLQHSFE 252
+CG C+ + S + LS + D +++ + E + H+ EHKL+H E
Sbjct: 1270 MCGRMMCSQ---VMCSEKMDHELLSGESHDEEEDFKDALEYELERELEHELEHKLEHELE 1326

Query: 253 SAQSH*GERLLLSGICEEVEEGAERIEKE 339
H ER L + E+ E ++++E
Sbjct: 1327 RELEHELERELEHELQREIREEERKLDRE 1355


>tr|Q229C4|Q229C4_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01436760 PE=4
SV=1
Length = 1415

Score = 34.3 bits (77), Expect = 7.4
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2

Query: 140 ISPNQLSTVFVCRKTLKGSEKKQRLPINGNTNFNILLNQHNPTKE 274
I ++L +F+C+ + ++K Q+ + N N N + HNP ++
Sbjct: 1254 IEQDKLKDIFICQSPVSSNKKSQQQKVASNINQNYVTKSHNPQQQ 1298