DK960613
Clone id TST39A01NGRL0007_O08
Library
Length 676
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_O08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGAAACCCCCTCTCAGAGAGTAAAATAGGAAAAGAAAAGCTTCAATCATCTTCTGCCCA
AGCGTGCTTTCCATTGCTTCTCTGCATCAAAGCGTACTGTGGGGAAAGCGCTTACTTTTC
ATAAGTGTGTGAGTGTCTGTGGCTGTGTGTGTCTGTGTGTGTGTGCCCCGCTTTTATACC
CTCCTCCTCGACTGTTTCGCCTTTCCAACAAAAGAAGCTTTATTCACTTCCCTCCTTTCA
TCTCGCAGACAGACACAGATACACGCAGGCCTTGCCTTCAACAGAGTTTTGTCGTATAGC
TTCCATGGAGACCTCGGCTATGCTTTCTCCCCTCAGGTTTGGTGTCCATCACGAACTCAT
GCGCAAGCACCCCCACCCCCCAGAGCCTTCAGAGCCGTGGGTACCACCTACTCCTGAGCC
CAATTTCAGAATTGACGACCTGCTGGACTTCTCCAACGGCGAGCTTTGTGATGAATTTGA
CGAAGAGGAGGAGGAGCAATTGAAAGAGGGGAATTCGAGCTGTGGCGATGGTGGCATTGA
GCTGAAGGCCGACAGGTGTGTGGCGCAAGAAGAAAGCCAACAGCTGGCAACGACAAGCGG
TCTCTGTGTGCCGTCGGATGAGCTAGCTGACCAGCTGGAATGGCTCTCTACTTTCATTGA
AGATAGCTCATACTCA
■■Homology search results ■■ -
sp_hit_id P69781
Definition sp|P69781|GAT13_ARATH GATA transcription factor 13 OS=Arabidopsis thaliana
Align length 83
Score (bit) 41.2
E-value 0.005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960613|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_O08, 5'
(676 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P69781|GAT13_ARATH GATA transcription factor 13 OS=Arabidopsi... 41 0.005
sp|Q9SD38|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis... 41 0.007
sp|O49743|GATA4_ARATH GATA transcription factor 4 OS=Arabidopsis... 38 0.056
sp|Q9FH57|GAT14_ARATH GATA transcription factor 14 OS=Arabidopsi... 36 0.21
sp|O82632|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsi... 35 0.48
sp|O49741|GATA2_ARATH GATA transcription factor 2 OS=Arabidopsis... 34 0.81
sp|P17101|HBSAG_HBVA4 Large envelope protein OS=Hepatitis B viru... 31 5.2
sp|Q8MYE8|PAAF1_DICDI Probable proteasomal ATPase-associated fac... 31 6.8
sp|Q4R1S6|HBSAG_HBVA8 Large envelope protein OS=Hepatitis B viru... 31 6.8
sp|P06902|H3L_CAIMO Histone H3-like OS=Cairina moschata PE=3 SV=2 31 6.8
sp|Q6K977|C3H19_ORYSJ Zinc finger CCCH domain-containing protein... 31 6.8
sp|Q5KMN5|YTH1_CRYNE mRNA 3'-end-processing protein YTH1 OS=Cryp... 30 8.9
sp|O91534|HBSAG_HBVA7 Large envelope protein OS=Hepatitis B viru... 30 8.9
sp|Q91C35|HBSAG_HBVA6 Large envelope protein OS=Hepatitis B viru... 30 8.9
sp|P03141|HBSAG_HBVA3 Large envelope protein OS=Hepatitis B viru... 30 8.9

>sp|P69781|GAT13_ARATH GATA transcription factor 13 OS=Arabidopsis
thaliana GN=At5g25830 PE=2 SV=1
Length = 331

Score = 41.2 bits (95), Expect = 0.005
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2

Query: 422 NFRIDDLL-DFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLATTS 598
+F +DDLL DFSN S +L + Q+ + + +
Sbjct: 13 DFAVDDLLVDFSNDDDEENDVVADSTTTTTITDSSNFSAADLPSFHGDVQDGT---SFSG 69

Query: 599 GLCVPSDELADQLEWLSTFIEDS 667
LC+PSD+LAD+LEWLS +++S
Sbjct: 70 DLCIPSDDLADELEWLSNIVDES 92


>sp|Q9SD38|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis
thaliana GN=GATA9 PE=2 SV=1
Length = 312

Score = 40.8 bits (94), Expect = 0.007
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +2

Query: 422 NFRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEE----SQQLA 589
+F +DDLLDFS + ++++ R V+ E S +
Sbjct: 27 DFSVDDLLDFSKEEEDDDVLVED------------EAELKVQRKRGVSDENTLHRSNDFS 74

Query: 590 T----TSGLCVPSDELADQLEWLSTFIEDSSYS 676
T TSGL VP D++A+ LEWLS F++DSS++
Sbjct: 75 TADFHTSGLSVPMDDIAE-LEWLSNFVDDSSFT 106


>sp|O49743|GATA4_ARATH GATA transcription factor 4 OS=Arabidopsis
thaliana GN=GATA4 PE=2 SV=1
Length = 240

Score = 37.7 bits (86), Expect = 0.056
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2

Query: 428 RIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLAT--TSG 601
RIDDLLDFSN SS E + S L T T
Sbjct: 13 RIDDLLDFSNDEIFSSSSTVTSSAASSAASS------ENPFSFPSSTYTSPTLLTDFTHD 66

Query: 602 LCVPSDELADQLEWLSTFIEDS 667
LCVPSD+ A LEWLS F++DS
Sbjct: 67 LCVPSDDAA-HLEWLSRFVDDS 87


>sp|Q9FH57|GAT14_ARATH GATA transcription factor 14 OS=Arabidopsis
thaliana GN=At5g66320 PE=2 SV=1
Length = 339

Score = 35.8 bits (81), Expect = 0.21
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +2

Query: 422 NFRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSC---GDGGIELKADRCVAQEESQQLAT 592
+F +DDLLD SN S D G L+ + +
Sbjct: 40 DFSVDDLLDLSNDDVFADEETDLKAQHEMVRVSSEEPNDDGDALRRSSDFSGCDDFGSLP 99

Query: 593 TSGLCVPSDELADQLEWLSTFIEDS 667
TS L +P+D+LA+ LEWLS F+EDS
Sbjct: 100 TSELSLPADDLAN-LEWLSHFVEDS 123


>sp|O82632|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis
thaliana GN=GATA11 PE=2 SV=1
Length = 308

Score = 34.7 bits (78), Expect = 0.48
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +2

Query: 422 NFRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLATT-- 595
+F +DDLLDFSN G ++ D L S L T
Sbjct: 17 SFVVDDLLDFSNDDGEVDD----------GLNTLPDSST-LSTGTLTDSSNSSSLFTDGT 65

Query: 596 --SGLCVPSDELADQLEWLSTFIEDS 667
S L +P+D++A+ LEWLS F+E+S
Sbjct: 66 GFSDLYIPNDDIAE-LEWLSNFVEES 90


>sp|O49741|GATA2_ARATH GATA transcription factor 2 OS=Arabidopsis
thaliana GN=GATA2 PE=2 SV=1
Length = 264

Score = 33.9 bits (76), Expect = 0.81
Identities = 25/80 (31%), Positives = 32/80 (40%)
Frame = +2

Query: 428 RIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLATTSGLC 607
RIDDLLDFSN +S + + +C
Sbjct: 13 RIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPSFHHHHLPSSADHHSFL--HDIC 70

Query: 608 VPSDELADQLEWLSTFIEDS 667
VPSD+ A LEWLS F++DS
Sbjct: 71 VPSDDAA-HLEWLSQFVDDS 89


>sp|P17101|HBSAG_HBVA4 Large envelope protein OS=Hepatitis B virus
genotype A2 subtype adw2 (isolate Germany/991/1990) GN=S
PE=1 SV=3
Length = 400

Score = 31.2 bits (69), Expect = 5.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3

Query: 587 PAVGFLLAPHTCRPSAQCHHRHSSNSPLSIAPPPLRQIHHKARRWRSPAGRQ 432
P +L P + P +R S P I+PP LR H +A +W S A Q
Sbjct: 79 PQAQGMLTPVSTIPPPASANRQSGRQPTPISPP-LRDSHPQAMQWNSTAFHQ 129


>sp|Q8MYE8|PAAF1_DICDI Probable proteasomal ATPase-associated factor
1 OS=Dictyostelium discoideum GN=paaf1 PE=3 SV=1
Length = 425

Score = 30.8 bits (68), Expect = 6.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +3

Query: 345 SITNSCASTP-------TPQSLQSRGYHLLLSPISELTTCWTSPTASFVMNLTKRRR 494
+I +CAST T SL RG +L+ + W PT+S + NLTK R
Sbjct: 174 AIEGTCASTLVGHIGGITSASLVDRGRNLVSCSRDGTSKLWDIPTSSIISNLTKLSR 230


>sp|Q4R1S6|HBSAG_HBVA8 Large envelope protein OS=Hepatitis B virus
genotype A3 (isolate Cameroon/CMR983/1994) GN=S PE=1
SV=1
Length = 400

Score = 30.8 bits (68), Expect = 6.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3

Query: 548 PSAQCHHRHSSNSPLSIAPPPLRQIHHKARRWRSPAGRQ 432
P +R S P I+PP LR H +A +W SPA Q
Sbjct: 92 PPPASANRQSGRQPTPISPP-LRDSHPQAIKWNSPAFHQ 129


>sp|P06902|H3L_CAIMO Histone H3-like OS=Cairina moschata PE=3 SV=2
Length = 136

Score = 30.8 bits (68), Expect = 6.8
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -3

Query: 647 RAIPAGQLAHPTAHRDRLSLPAVGFLLAPHTCRP-SAQCH--HRHSSNSPLSIAPPPLRQ 477
R P QLA AH+ S PA+G + PH RP + H HR+ ++ L I P ++
Sbjct: 14 RKAPRKQLATKAAHK---SAPAMGGVKKPHCYRPGTVALHEIHRYQKSTELLICKLPFQR 70

Query: 476 I 474
+
Sbjct: 71 L 71


tr_hit_id A9TIX1
Definition tr|A9TIX1|A9TIX1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 89
Score (bit) 45.8
E-value 0.002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960613|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_O08, 5'
(676 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TIX1|A9TIX1_PHYPA Predicted protein (Fragment) OS=Physcomit... 46 0.002
tr|A5BYA8|A5BYA8_VITVI Putative uncharacterized protein OS=Vitis... 43 0.016
tr|Q76DY1|Q76DY1_TOBAC AG-motif binding protein-3 OS=Nicotiana t... 43 0.021
tr|A7PKH7|A7PKH7_VITVI Chromosome chr15 scaffold_19, whole genom... 42 0.027
tr|A7QE32|A7QE32_VITVI Chromosome chr4 scaffold_83, whole genome... 41 0.080
tr|A7P7X0|A7P7X0_VITVI Chromosome chr3 scaffold_8, whole genome ... 40 0.18
tr|A5BCJ0|A5BCJ0_VITVI Putative uncharacterized protein (Chromos... 37 1.5
tr|B5HS19|B5HS19_9ACTO Beta-lactamase OS=Streptomyces sviceus AT... 36 1.9
tr|B8LKB3|B8LKB3_PICSI Putative uncharacterized protein OS=Picea... 35 3.3
tr|A7P754|A7P754_VITVI Chromosome chr9 scaffold_7, whole genome ... 35 3.3
tr|Q6Z8A3|Q6Z8A3_ORYSJ Putative uncharacterized protein P0017H11... 35 5.6
tr|Q0IML3|Q0IML3_ORYSJ Os12g0562800 protein OS=Oryza sativa subs... 35 5.6
tr|A9VC57|A9VC57_MONBE Predicted protein OS=Monosiga brevicollis... 35 5.7
tr|A9UZS3|A9UZS3_MONBE Predicted protein OS=Monosiga brevicollis... 35 5.7
tr|Q91C42|Q91C42_HBV Large envelope protein OS=Hepatitis B virus... 34 7.4
tr|A3BUA3|A3BUA3_ORYSJ Putative uncharacterized protein OS=Oryza... 34 7.4
tr|Q4T167|Q4T167_TETNG Chromosome 18 SCAF10707, whole genome sho... 34 9.7

>tr|A9TIX1|A9TIX1_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_34911 PE=4 SV=1
Length = 243

Score = 45.8 bits (107), Expect = 0.002
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +2

Query: 425 FRIDDLLDFSN--------GXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQ 580
F IDDLLDFS G G +S IE K + E
Sbjct: 6 FHIDDLLDFSCDDIGGPILGGHLPLSGVTTESSMIGGETSISSSPIEAKNETLEPALEDI 65

Query: 581 QLATTSGLCVPSDELADQLEWLSTFIEDS 667
++ T LCVP D+LAD LEWLS+F+EDS
Sbjct: 66 EVKTD--LCVPCDDLAD-LEWLSSFVEDS 91


>tr|A5BYA8|A5BYA8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_037635 PE=4 SV=1
Length = 338

Score = 43.1 bits (100), Expect = 0.016
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Frame = +2

Query: 422 NFRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLATT-- 595
+F IDDLLDF+NG + CG L R + + ++ L TT
Sbjct: 44 DFSIDDLLDFTNGGIGEGLFQEEDEEDE--DKGCG----SLSPRRELTENDNSNLTTTTF 97

Query: 596 -----------SGLCVPSDELADQLEWLSTFIEDS 667
+ L VP+D+LAD LEWLS F+EDS
Sbjct: 98 SVKDEFPSVPATELTVPADDLAD-LEWLSHFVEDS 131


>tr|Q76DY1|Q76DY1_TOBAC AG-motif binding protein-3 OS=Nicotiana
tabacum GN=AGP3 PE=2 SV=1
Length = 256

Score = 42.7 bits (99), Expect = 0.021
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Frame = +2

Query: 425 FRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLAT---- 592
FRIDDLLDFSN NSS + + ++ AT
Sbjct: 12 FRIDDLLDFSNDEIFSIN----------SNSSSTTATPDSQHHHHQPHSDNSSAATANYY 61

Query: 593 -----------TSGLCVPSDELADQLEWLSTFIEDS 667
T LCVPSD++A+ LEWLS F+EDS
Sbjct: 62 DALLPNCSDDFTDNLCVPSDDVAE-LEWLSNFVEDS 96


>tr|A7PKH7|A7PKH7_VITVI Chromosome chr15 scaffold_19, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019179001
PE=4 SV=1
Length = 270

Score = 42.4 bits (98), Expect = 0.027
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2

Query: 425 FRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLAT-TSG 601
FRIDDLLDF+N +S G L A Q + A T
Sbjct: 12 FRIDDLLDFTNDELFSSTTTDSGNLPPPEIAS---GNRSLAASGNRDQPNTFHSADFTDD 68

Query: 602 LCVPSDELADQLEWLSTFIEDS 667
LCVPSD++A +LEWLS F++DS
Sbjct: 69 LCVPSDDVA-ELEWLSNFVDDS 89


>tr|A7QE32|A7QE32_VITVI Chromosome chr4 scaffold_83, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036842001
PE=4 SV=1
Length = 338

Score = 40.8 bits (94), Expect = 0.080
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Frame = +2

Query: 422 NFRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKADRCVAQEESQQLATT-- 595
+F IDDLLDF+NG + G G + + + + + ++ L TT
Sbjct: 44 DFSIDDLLDFTNGGIGEGLFQEEDEE----DEDKGCGSLSPRGE--LTENDNSNLTTTTF 97

Query: 596 -----------SGLCVPSDELADQLEWLSTFIEDS 667
+ L VP+D+LAD LEWLS F+EDS
Sbjct: 98 SVKDEFPSVPATELTVPADDLAD-LEWLSHFVEDS 131


>tr|A7P7X0|A7P7X0_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00035949001
PE=4 SV=1
Length = 274

Score = 39.7 bits (91), Expect = 0.18
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +2

Query: 422 NFRIDDLLDFSNGXXXXXXXXXXXXXXXXGNSSCGDGGIELKAD-----RCVAQEESQQL 586
+F +DDL DFSNG S +E D + +
Sbjct: 44 DFSVDDLFDFSNGGLGVGFEGEEEEEEEEEKDSFSWSSLERVDDDNSNSSSFSGTGDFES 103

Query: 587 ATTSGLCVPSDELADQLEWLSTFIEDSSYS 676
+ GL VP+D+L + LEWLS F++DSS S
Sbjct: 104 LSAGGLAVPADDL-EHLEWLSHFVDDSSAS 132


>tr|A5BCJ0|A5BCJ0_VITVI Putative uncharacterized protein (Chromosome
chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00032414001 PE=4 SV=1
Length = 342

Score = 36.6 bits (83), Expect = 1.5
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Frame = +2

Query: 422 NFRIDDLLDFSNGXXXXXXXXXXXXXXXXGNS-------SCGD-GGIELKADRCVAQEES 577
+F I+DLLDFSN +S SC G E + +
Sbjct: 35 HFIIEDLLDFSNDDAVITDGTFDTVTGTSTDSSTFTIVDSCNSVSGCEPQFAGDIGSRNY 94

Query: 578 QQLATTSGLCVPSDELADQLEWLSTFIEDS 667
+S LCVP D+LA +LEWLS +E+S
Sbjct: 95 TDAHFSSDLCVPYDDLA-ELEWLSNIVEES 123


>tr|B5HS19|B5HS19_9ACTO Beta-lactamase OS=Streptomyces sviceus ATCC
29083 GN=SSEG_08863 PE=4 SV=1
Length = 382

Score = 36.2 bits (82), Expect = 1.9
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3

Query: 638 PAGQLAHPTAHRDRLSLPAVGFLL-APHTCRPSAQCHHRHSSNSPLSIAPPPLRQIHHKA 462
PA A P+A DR + P+ + +P RP+ C S P + PPP RQ+ H+
Sbjct: 282 PASDDAPPSA--DRRTAPSGAYSSPSPRAIRPAKPCKEETWSPPPPTTHPPPRRQMPHRP 339

Query: 461 RRWRSPA 441
R +PA
Sbjct: 340 LRHATPA 346


>tr|B8LKB3|B8LKB3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 321

Score = 35.4 bits (80), Expect = 3.3
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2

Query: 602 LCVPSDELADQLEWLSTFIEDS 667
LCVP+D L ++LEWLSTF++DS
Sbjct: 105 LCVPADAL-EELEWLSTFVDDS 125


>tr|A7P754|A7P754_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034329001
PE=4 SV=1
Length = 329

Score = 35.4 bits (80), Expect = 3.3
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2

Query: 602 LCVPSDELADQLEWLSTFIEDS 667
LCVP DELA+ LEWLS F+E+S
Sbjct: 100 LCVPCDELAE-LEWLSNFVEES 120