NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960614
Clone id TST39A01NGRL0007_O09
Library
Length 463
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_O09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCATTTTTCCTCCTCCAGAAAGCTTTAGCTACTTGACACAGAGTCACATGCCAATGGCCG
TTGTCCCTCTGCGGCTCAGCTACTCTGCTTCGCCTGCCAGAGCAGTTTGCGCGAATGTTG
CGGCAAGAGTACCATTGAAGACAGTAGGGCGGATTTCAACAAAAGCAATCTGCTCAAAAG
AAAGGTTCTTATTCAGAGACTTGCGTTTGAGGTTGCAAATCACATCCAATGCAGCAGCAA
GTGAGGCGTCACCATTACTAGTAGAACATTTGGTAAAGAAAGCTCGTGAGCACCGGCTAC
AACACCTTGAAGAGCAGGCTCTTTGGGTGCTCAGGGAAATTGTCAACAGCTATCAGACCC
CGGCATTCCCTTGTGCTCTGATTGCAGGGCATGTGGTTATTCTTGACCTGTTGAGCAAGC
TTGATTACCTGATAAATGGCACGTGTAAAGTTATTTTTATTGA
■■Homology search results ■■ -
sp_hit_id P57499
Definition sp|P57499|CYSD_BUCAI Sulfate adenylyltransferase subunit 2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
Align length 53
Score (bit) 30.0
E-value 5.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960614|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_O09, 5'
         (463 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P57499|CYSD_BUCAI Sulfate adenylyltransferase subunit 2 OS=Bu...    30   5.0  
sp|Q58291|OTC_METJA Ornithine carbamoyltransferase OS=Methanocal...    29   8.5  

>sp|P57499|CYSD_BUCAI Sulfate adenylyltransferase subunit 2
           OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
           GN=cysD PE=3 SV=1
          Length = 302

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +3

Query: 270 LVKKAREHRLQHLEEQALWVLREIVNSYQTPAFPCALIAGHVVILDLLSKLDY 428
           + KK   H L+ LE ++++++RE+++ +Q P    ++     V+L L  K  Y
Sbjct: 1   MFKKNTTH-LRQLESESIYIMREVMSDFQNPVMLYSIGKDSSVMLHLAKKSFY 52


>sp|Q58291|OTC_METJA Ornithine carbamoyltransferase
           OS=Methanocaldococcus jannaschii GN=argF PE=3 SV=1
          Length = 305

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 282 AREHRLQHLEEQALWVLREIVNSYQTPAFPCALIAGHVVILDLLSK 419
           AR ++ +HLEE A +    ++N+    A PC ++A  + I +   K
Sbjct: 98  ARVYKHRHLEEMAKYSSVPVINALSDLAHPCQILADLMTIKEYKGK 143
tr_hit_id Q8L5D0
Definition tr|Q8L5D0|Q8L5D0_PHYPA Phosphoadenosine-phosphosulphate reductase OS=Physcomitrella patens
Align length 74
Score (bit) 69.7
E-value 7.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960614|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_O09, 5'
         (463 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8L5D0|Q8L5D0_PHYPA Phosphoadenosine-phosphosulphate reductas...    70   7e-11
tr|A9S2B6|A9S2B6_PHYPA Predicted protein OS=Physcomitrella paten...    70   7e-11
tr|Q6PMM1|Q6PMM1_SELLP Phosphoadenosine 5'phosphosulfate reducta...    64   4e-09
tr|B5Y5U1|B5Y5U1_PHATR Predicted protein (Fragment) OS=Phaeodact...    64   4e-09
tr|B8CCL3|B8CCL3_THAPS Phosphoadenosine-phosphosulphate reductas...    60   5e-08
tr|A8PV01|A8PV01_BRUMA Membrane-associated protein gex-3, putati...    33   5.4  
tr|B6HR71|B6HR71_PENCH Pc22g20620 protein OS=Penicillium chrysog...    33   7.0  

>tr|Q8L5D0|Q8L5D0_PHYPA Phosphoadenosine-phosphosulphate reductase
           OS=Physcomitrella patens GN=papr PE=2 SV=1
          Length = 326

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 35/74 (47%), Positives = 51/74 (68%)
 Frame = +3

Query: 240 SEASPLLVEHLVKKAREHRLQHLEEQALWVLREIVNSYQTPAFPCALIAGHVVILDLLSK 419
           +  S + ++   ++AR+ RLQHLE QAL  L++ V +++ PAFPCALIAG VVILDLL +
Sbjct: 72  TSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHR 131

Query: 420 LDYLINGTCKVIFI 461
           +    +   K+IFI
Sbjct: 132 IGAFSDNKVKIIFI 145


>tr|A9S2B6|A9S2B6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_123215 PE=4 SV=1
          Length = 326

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 35/74 (47%), Positives = 51/74 (68%)
 Frame = +3

Query: 240 SEASPLLVEHLVKKAREHRLQHLEEQALWVLREIVNSYQTPAFPCALIAGHVVILDLLSK 419
           +  S + ++   ++AR+ RLQHLE QAL  L++ V +++ PAFPCALIAG VVILDLL +
Sbjct: 72  TSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHR 131

Query: 420 LDYLINGTCKVIFI 461
           +    +   K+IFI
Sbjct: 132 IGAFSDNKVKIIFI 145


>tr|Q6PMM1|Q6PMM1_SELLP Phosphoadenosine 5'phosphosulfate reductase
           OS=Selaginella lepidophylla PE=2 SV=1
          Length = 307

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
 Frame = +3

Query: 225 SNAAASEASPLLVEHLV------KKAREHRLQHLEEQALWVLREIVNSYQTPAFPCALIA 386
           S +A + AS   V+  V      ++  E R QHL+ QA+  L++ ++S++ P FPCALI 
Sbjct: 44  SKSAVNAASATEVKESVDIKQWNEQIYEGRQQHLQSQAMDALKKSLSSFKNPTFPCALIL 103

Query: 387 GHVVILDLLSKLDYLINGTCKVIFI 461
           G VV+LDLL ++  L NG  KV+FI
Sbjct: 104 GDVVLLDLLHRVGALENGAVKVVFI 128


>tr|B5Y5U1|B5Y5U1_PHATR Predicted protein (Fragment)
           OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATR_25956
           PE=4 SV=1
          Length = 272

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +3

Query: 264 EHLVKKAREHRLQHLEEQALWVLREIVNSYQTPAFPCALIAGHVVILDLLSKLDYLINGT 443
           E  + +++E RL+HLEEQA++ L+  V +Y    FP A+IAG VVI  LLS+L YL NG 
Sbjct: 50  EQYIAESKEMRLKHLEEQAMFALKIAVENYGNAVFPNAMIAGDVVITHLLSRLGYLENGK 109

Query: 444 CKVIFI 461
            K++ +
Sbjct: 110 AKIMVV 115


>tr|B8CCL3|B8CCL3_THAPS Phosphoadenosine-phosphosulphate reductase
           OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_24887
           PE=4 SV=1
          Length = 438

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 33/80 (41%), Positives = 48/80 (60%)
 Frame = +3

Query: 222 TSNAAASEASPLLVEHLVKKAREHRLQHLEEQALWVLREIVNSYQTPAFPCALIAGHVVI 401
           TS   A +A     E  + +++E RL+HLEEQA++ L+  V +Y    FP ALIAG  VI
Sbjct: 41  TSLQMADDAKIFDQESFIAESKEMRLKHLEEQAMFALKIAVENYGNAVFPNALIAGDSVI 100

Query: 402 LDLLSKLDYLINGTCKVIFI 461
             LL ++ YL +G  KV+ +
Sbjct: 101 THLLHRMGYLKDGQAKVMVV 120


>tr|A8PV01|A8PV01_BRUMA Membrane-associated protein gex-3, putative
           OS=Brugia malayi GN=Bm1_35160 PE=4 SV=1
          Length = 1129

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +3

Query: 231 AAASEASPLLVEHLVKKAREHRLQHLEEQALWVLREIVNSYQTPAFPCALIAGHVVILDL 410
           +A + +  ++V   V   RE+  Q LE Q    ++ +++S + P  PC L+A     + +
Sbjct: 684 SAVTSSKQVVVSDHVFAPREYLAQQLESQLTQSIQALISSSEHPMRPCQLLASINAHMIV 743

Query: 411 LSKLDYLI 434
           L  LD ++
Sbjct: 744 LQNLDTIV 751


>tr|B6HR71|B6HR71_PENCH Pc22g20620 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc22g20620 PE=4 SV=1
          Length = 608

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = +2

Query: 65  PSAAQLLCFACQSSLRECCGKST------IEDSRADFNKSNLLKRKVLIQRLAFEVANH 223
           P      C AC+++ R+C G           ++   F+ S  L+RKV ++R   E+ NH
Sbjct: 32  PKKNSTACLACKAAKRKCSGPDAPCKACRSTNTECHFDPSRDLRRKVAVKRTIQELTNH 90