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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960621
Clone id TST39A01NGRL0007_O16
Library
Length 607
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_O16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
TGCTGCTGTAGAGGCTGTCGGGGGCACGTCTACTGCTGTAGGGGGCACGGATACTGCTTC
CGCCCTCCCATTTCACCCCAACTACCTTCCGTTTAGCTAGACAAGGTATCAATCTCCTAC
TCCATAGCCTTCCTCCAAACATCCTATTTAAGAGCTTGACCTACATGTGTAAGTTCACCC
TTTGGCTCAAAGTTTTCATTTCTCTAAGTTCACCCTTTGGCTTACACACTTATTCTAATA
TACACTTATAGACTGAATTGCCCCCCGCCTGTCTCCCGTCTTGTCTGCGTTCACTCACTT
ACTCAGGATGTCGAAACTGAGGAAGCGGGAAATTTCTGGTAACGTCATGGAAGCGAATGA
GAAGAGGAAGTTGTGAACTTCTGGAATGAAAGCAGATGAGAGGAAGGGCAAAGAGCCTCT
GGATATACAGAAAGGGTTTCCCCTCAGGAAAAGCACGAGGAGGCGTTTCTCCCCACCAGA
TGAGTCCAATAAAATGGTGGCAAATATGGTGACAATGGAAATGCTTGAGAGAATGGAGGC
AATTTTGGAGTCCAAGTTGAAGCAGAGGGATGCGAAGATGGAGTCCGAGTTGCTACAGAG
GGATGAG
■■Homology search results ■■ -
sp_hit_id Q90ZE2
Definition sp|Q90ZE2|ZN703_DANRE Zinc finger protein 703 OS=Danio rerio
Align length 84
Score (bit) 33.1
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960621|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_O16, 5'
         (607 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q90ZE2|ZN703_DANRE Zinc finger protein 703 OS=Danio rerio GN=...    33   1.1  
sp|Q9BV73|CP250_HUMAN Centrosome-associated protein CEP250 OS=Ho...    32   1.9  
sp|Q60952|CP250_MOUSE Centrosome-associated protein CEP250 OS=Mu...    32   2.5  
sp|A7TIZ4|ATG1_VANPO Serine/threonine-protein kinase atg1 OS=Van...    30   7.4  
sp|P33419|NIP29_YEAST Protein NIP29 OS=Saccharomyces cerevisiae ...    30   9.6  

>sp|Q90ZE2|ZN703_DANRE Zinc finger protein 703 OS=Danio rerio
           GN=znf703 PE=1 SV=1
          Length = 589

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = -3

Query: 599 SVATRTPSSHPSASTWTPKLPP-FSQAFPLSPYLPPF-YWTHLVGRNASSCFS*GETL-- 432
           S+    P  HPS+S  T   PP F Q     PY   +    HL G N SSC     +   
Sbjct: 357 SLGMGVPGKHPSSSPLTGASPPSFMQGLCRDPYCLTYPNAPHLGGSNCSSCVHDPSSALK 416

Query: 431 SVYPEALCPSSHLLSFQKFTTSSS 360
           S +P  + P+ HL S    + SSS
Sbjct: 417 SGFP-LMYPTHHLHSLHPSSLSSS 439


>sp|Q9BV73|CP250_HUMAN Centrosome-associated protein CEP250 OS=Homo
            sapiens GN=CEP250 PE=1 SV=2
          Length = 2442

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
 Frame = +2

Query: 323  KREISGNVMEANEKRKL*TSGMKADERKGKEPLDIQKGFPLRKSTRRRFSPPDESNKMVA 502
            K E+     +A ++R      +   E++GK  L+ QK    ++  + R     E +    
Sbjct: 812  KLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQ 871

Query: 503  NMV-TMEMLERMEAILESKLKQRDAKMESELLQRDE 607
             +   +E LER +  LE +LK++  +ME+   QR+E
Sbjct: 872  ELAKALESLEREKMELEMRLKEQQTEMEAIQAQREE 907


>sp|Q60952|CP250_MOUSE Centrosome-associated protein CEP250 OS=Mus
           musculus GN=Cep250 PE=1 SV=3
          Length = 2414

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 512 TMEMLERMEAILESKLKQRDAKMESELLQRDE 607
           T+E LER  A LE+KL+++  +ME+   QR+E
Sbjct: 877 TLETLERERAELETKLREQQTEMEAIRAQREE 908


>sp|A7TIZ4|ATG1_VANPO Serine/threonine-protein kinase atg1
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=ATG1 PE=3 SV=1
          Length = 994

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +2

Query: 410 KEPLDIQKGFPLRKSTRRRFSPPDESNKMVANMVTMEMLERMEAILE----SKLKQRDAK 577
           K+  +I +  PL KS  +RF PP +++  +     +  L+++ + L+      L  RD K
Sbjct: 121 KKRQEIMENHPLLKSVFKRFPPPSKNHNGLHRAFILNYLQQLSSSLKFLRSKNLVHRDIK 180

Query: 578 MESELL 595
            ++ LL
Sbjct: 181 PQNLLL 186


>sp|P33419|NIP29_YEAST Protein NIP29 OS=Saccharomyces cerevisiae
           GN=NIP29 PE=1 SV=1
          Length = 253

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
 Frame = +2

Query: 296 HLLRMSKLRKREISGNVMEANEKR-------------KL*TSGMKADERKGKEPLDIQKG 436
           H   + KLR+   S N  E   K+             +L  +G K+D+RK K PLD +  
Sbjct: 26  HEEALKKLREENFSSNTSELGNKKHYRAQERMSSPLHRLSPTG-KSDDRKVKSPLDDKLR 84

Query: 437 FPLRKSTRRRFSPPDESNKM 496
             LR+   R   PP  S  M
Sbjct: 85  RQLREGNTRLPPPPFSSYGM 104
tr_hit_id B6KCM6
Definition tr|B6KCM6|B6KCM6_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 42
Score (bit) 35.8
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960621|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_O16, 5'
         (607 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KCM6|B6KCM6_TOXGO Putative uncharacterized protein OS=Toxop...    36   2.0  
tr|Q0JLR6|Q0JLR6_ORYSJ Os01g0578800 protein (Fragment) OS=Oryza ...    35   3.4  
tr|B4HH42|B4HH42_DROSE GM26612 OS=Drosophila sechellia GN=GM2661...    35   3.4  
tr|B2RWX5|B2RWX5_MOUSE Centrosomal protein 250 OS=Mus musculus G...    35   4.4  
tr|A7QB29|A7QB29_VITVI Chromosome chr5 scaffold_72, whole genome...    35   4.4  
tr|B0E991|B0E991_ENTDI Cytoskeletal protein Sojo, putative OS=En...    35   4.4  
tr|Q7X7E4|Q7X7E4_ORYSJ Os04g0444400 protein OS=Oryza sativa subs...    34   7.5  
tr|A2XTW3|A2XTW3_ORYSI Putative uncharacterized protein OS=Oryza...    34   7.5  
tr|A2QWN9|A2QWN9_ASPNC Similarity to hypothetical protein encode...    34   7.6  
tr|B3DYN9|B3DYN9_METI4 TPR repeats containing protein OS=Methyla...    33   9.8  
tr|A6GAS9|A6GAS9_9DELT Putative uncharacterized protein OS=Plesi...    33   9.8  

>tr|B6KCM6|B6KCM6_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_069060 PE=4 SV=1
          Length = 1369

 Score = 35.8 bits (81), Expect = 2.0
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = -3

Query: 476 VGRNASSCFS*GETLSVYPEALCPSSHLLSFQKFTTSSSHSL 351
           VG ++SSC S    +S     LCPSS + SF    +SSSHSL
Sbjct: 184 VGCSSSSCSSAASPISSSYSTLCPSSKIASFIVSPSSSSHSL 225


>tr|Q0JLR6|Q0JLR6_ORYSJ Os01g0578800 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0578800 PE=4 SV=1
          Length = 205

 Score = 35.0 bits (79), Expect = 3.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 602 PSVATRTPSSHPSASTWTPKLPPFSQAFPLSPYLPP 495
           P+ A  TPSS P A    P+LPP+S   P S   PP
Sbjct: 70  PTSADPTPSSSPPAPATPPRLPPWSWTSPASCLAPP 105


>tr|B4HH42|B4HH42_DROSE GM26612 OS=Drosophila sechellia GN=GM26612
           PE=4 SV=1
          Length = 476

 Score = 35.0 bits (79), Expect = 3.4
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = -3

Query: 596 VATRTPSSHPSASTWTPKLPPFSQAFPLSPYLPP 495
           VA+ +PSS PS+ST    +PP S A P SP LPP
Sbjct: 232 VASPSPSSSPSSST-VDHIPPASPAPPASPALPP 264


>tr|B2RWX5|B2RWX5_MOUSE Centrosomal protein 250 OS=Mus musculus
            GN=Cep250 PE=2 SV=1
          Length = 2414

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = +2

Query: 314  KLRKREISGNVMEANEKRKL*TSGMKADERKGKEPLDIQKGFPLRKSTRRRFSPPDESNK 493
            K  K E+      A ++R      +   E++G+  L+ QK     +  R +     E + 
Sbjct: 810  KCLKLELDAERTRAEQERDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSW 869

Query: 494  MVANM-VTMEMLERMEAILESKLKQRDAKMESELLQRDE 607
            +   +  T+E LER  A LE+KL+++  +ME+   QR+E
Sbjct: 870  LQQELDKTLETLERERAELETKLREQQTEMEAIRTQREE 908


>tr|A7QB29|A7QB29_VITVI Chromosome chr5 scaffold_72, whole genome
           shotgun sequence (Mildew resistance locus o 15) OS=Vitis
           vinifera GN=MLO15 PE=2 SV=1
          Length = 506

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -2

Query: 504 FATILLDSSGGEKRLLVLFLRGNPFCISRGSLPFLSSAFIPEVHNFLFSFA 352
           F T    +SGG +RLL        +C  RG  P LS+  +  +H F+F  A
Sbjct: 111 FQTFYHFTSGGARRLLAEHSASPSYCAKRGKDPLLSTTALHHLHIFIFVLA 161


>tr|B0E991|B0E991_ENTDI Cytoskeletal protein Sojo, putative
           OS=Entamoeba dispar SAW760 GN=EDI_249400 PE=4 SV=1
          Length = 629

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
 Frame = +2

Query: 308 MSKLRKREISGNVMEANEKRKL*TSGMKADERKGKEPLDIQKGFPLRKSTRRRFSP---- 475
           MS L ++++  NV E  EK++   + +K   +K  E LDI +    RKS  + FS     
Sbjct: 32  MSSLYRKKVQ-NVQERIEKQEAKLTKIKKQIKKVLEALDISEA--KRKSNEKTFSQLVFR 88

Query: 476 --PDESNKMVANMVTMEMLERMEAILESKLKQRDAKMESELLQ 598
                +NK     + + + +  + I  SKL+++  K++  LL+
Sbjct: 89  KNKSGNNKETLKYLNIRLKQTRKTIALSKLQEKKLKIKERLLK 131


>tr|Q7X7E4|Q7X7E4_ORYSJ Os04g0444400 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0027P08.3 PE=4 SV=1
          Length = 476

 Score = 33.9 bits (76), Expect = 7.5
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = -2

Query: 501 ATILLDSSGGEKRLLVLFLRGNPFCISRGSLPFLSSAFIPEVHNFLFSFA 352
           A+  + S  G +RLL     G+  C S+G +P LS   I ++H F+F  A
Sbjct: 108 ASAAVVSGAGARRLLGEGTAGSGHCSSKGKVPLLSLHAIEQIHIFIFVLA 157


>tr|A2XTW3|A2XTW3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16042 PE=4 SV=1
          Length = 487

 Score = 33.9 bits (76), Expect = 7.5
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = -2

Query: 501 ATILLDSSGGEKRLLVLFLRGNPFCISRGSLPFLSSAFIPEVHNFLFSFA 352
           A+  + S  G +RLL     G+  C S+G +P LS   I ++H F+F  A
Sbjct: 108 ASAAVVSGAGARRLLGEGTAGSGHCSSKGKVPLLSLHAIEQIHIFIFVLA 157


>tr|A2QWN9|A2QWN9_ASPNC Similarity to hypothetical protein encoded
           by An04g04580 - Aspergillus niger OS=Aspergillus niger
           (strain CBS 513.88 / FGSC A1513) GN=An11g05870 PE=4 SV=1
          Length = 853

 Score = 33.9 bits (76), Expect = 7.6
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -3

Query: 584 TPSSHPSASTWTPKLPPFSQAFPLSPYLPPFYWTHLVGRNASSC 453
           TP      S W  +LPPF+  F  +  + P Y +H  G N   C
Sbjct: 272 TPDELVDLSRWIRQLPPFASVFIETLLIQPTYHSHYAGSNPEYC 315


>tr|B3DYN9|B3DYN9_METI4 TPR repeats containing protein
           OS=Methylacidiphilum infernorum (isolate V4) GN=nrfG
           PE=4 SV=1
          Length = 647

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 362 KRKL*TSGMKADERKGKEPLDIQKGFPLRKSTRRRFSPPDESNKMVANMVTMEMLERMEA 541
           K KL   G K     GK P ++QKG     S+ R   P  ESN+ V   +  +  +   +
Sbjct: 92  KEKLKVLGPKL----GKTPEEVQKGLSSALSSTRTEPPTLESNRDVIKSLLSKHNKGSSS 147

Query: 542 ILE-SKLKQRDAKMESELLQ 598
             E +KLK R +++ESEL Q
Sbjct: 148 EEEVTKLKYRISQLESELAQ 167