DK960629 |
Clone id |
TST39A01NGRL0007_O24 |
Library |
TST39 |
Length |
612 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_O24. 5' end sequence. |
Accession |
DK960629 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3957Contig1 |
Sequence |
GTTGCAATGGTTGTAGAGTTCTGAGAAAAGGATGCAGTGACACTTGCATCCTGAGGTCCT CCTTGCAATGGATTGAGTCCCCCGAAGCGCAGGGCCATGCGACCGTTTTCATCGCCAAGT TCTTTGGAAGGGCCGGCATGATCAGCTTCATCAGTGCTGTGTCAGAGAGCCAGAGGCCAG CTCTCTTTCAATCTCTCTTGTATGAGGCCTGCGGAAGGACAGTGAATCCGGGGTTCGGGG CTGTTGGACTCTTATGGAGTGGTAATTGGGGGGTATGTCAAGCAGCGGTCGAGACTGTCC TCAAGGGCGGGTCTCTTCGGCCTGCGGCGGCTTGCATGCCTGCCCTCCCTACCAAGCCCA CACACTCCCTTACATGCAGATCCAACCTTCCCCCTCTCACAAATGCTTCTCCCACACTCA CCACTCCCTCTAACCAGTCGCTCAAAAGGACCCAATCCGCACAGCCGAGTGCGGAAGCAC CTGTTAAGCGGGTGAAAATATGTGTGCAGCAGCAAGAGCCCCTTCAAGAAGCCTCAAACA TCACTTCAGAGGTTGCTACCTTGTCTCAAGGGCAGCTTAATTATGGCCTGCTTTGTAAAC AGGCAAGCCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SN23 |
Definition |
sp|Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabidopsis thaliana |
Align length |
107 |
Score (bit) |
195.0 |
E-value |
2.0e-49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7XG94 |
Definition |
tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Arabidopsis thaliana |
Align length |
107 |
Score (bit) |
195.0 |
E-value |
2.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960629|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_O24, 5' (612 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Ara... 195 2e-48 tr|B7XG93|B7XG93_ARATH ASYMMETRIC LEAVES2-like 39 protein OS=Ara... 194 4e-48 tr|A9S1K7|A9S1K7_PHYPA Predicted protein (Fragment) OS=Physcomit... 194 4e-48 tr|A9PK79|A9PK79_POPJC Putative uncharacterized protein OS=Popul... 193 8e-48 tr|Q0PN09|Q0PN09_9FABA Lateral organ boundaries domain protein O... 190 5e-47 tr|A9T578|A9T578_PHYPA Predicted protein (Fragment) OS=Physcomit... 189 8e-47 tr|A9RNM5|A9RNM5_PHYPA Predicted protein (Fragment) OS=Physcomit... 187 3e-46 tr|B7XG95|B7XG95_ARATH ASYMMETRIC LEAVES2-like 41 protein OS=Ara... 187 5e-46 tr|A7NU79|A7NU79_VITVI Chromosome chr18 scaffold_1, whole genome... 186 7e-46 tr|Q6AV61|Q6AV61_ORYSJ Os03g0445700 protein OS=Oryza sativa subs... 183 6e-45 tr|A2XIF2|A2XIF2_ORYSI Putative uncharacterized protein OS=Oryza... 183 6e-45 tr|A7PLN7|A7PLN7_VITVI Chromosome chr7 scaffold_20, whole genome... 182 1e-44 tr|A9TCE3|A9TCE3_PHYPA Predicted protein (Fragment) OS=Physcomit... 178 2e-43 tr|A7QL54|A7QL54_VITVI Chromosome chr3 scaffold_117, whole genom... 177 6e-43 tr|A5AMP6|A5AMP6_VITVI Putative uncharacterized protein OS=Vitis... 177 6e-43 tr|Q9LG92|Q9LG92_ORYSJ Putative seed specific protein Bn15D17A (... 167 4e-40 tr|A2WK94|A2WK94_ORYSI Putative uncharacterized protein OS=Oryza... 167 4e-40 tr|Q7EZ26|Q7EZ26_ORYSJ Os07g0589000 protein OS=Oryza sativa subs... 166 8e-40 tr|B8B806|B8B806_ORYSI Putative uncharacterized protein OS=Oryza... 166 8e-40 tr|B6UCF2|B6UCF2_MAIZE Seed specific protein Bn15D17A OS=Zea may... 165 2e-39 tr|Q75HN5|Q75HN5_ORYSJ Os03g0609500 protein OS=Oryza sativa subs... 162 1e-38 tr|A3AKC0|A3AKC0_ORYSJ Putative uncharacterized protein OS=Oryza... 162 1e-38 tr|A2XJG6|A2XJG6_ORYSI Putative uncharacterized protein OS=Oryza... 162 1e-38 tr|Q1KUM5|Q1KUM5_9ROSI Putative uncharacterized protein OS=Cleom... 159 2e-37 tr|A5BBT8|A5BBT8_VITVI Putative uncharacterized protein (Chromos... 157 4e-37 tr|A9P7Z5|A9P7Z5_POPTR Putative uncharacterized protein OS=Popul... 157 5e-37 tr|A7P383|A7P383_VITVI Chromosome chr1 scaffold_5, whole genome ... 157 6e-37 tr|A5BRK8|A5BRK8_VITVI Putative uncharacterized protein OS=Vitis... 157 6e-37 tr|B7XG91|B7XG91_ARATH ASYMMETRIC LEAVES2-like 37 protein OS=Ara... 156 8e-37 tr|A2ZTP2|A2ZTP2_ORYSJ Putative uncharacterized protein OS=Oryza... 156 1e-36
>tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Arabidopsis thaliana GN=ASL40 PE=2 SV=1 Length = 247
Score = 195 bits (495), Expect = 2e-48 Identities = 91/107 (85%), Positives = 99/107 (92%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCS+ CILR +QWIESPEAQGHATVF+AKFFGRAG++SFISAV ESQ PA Sbjct: 3 CNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 323 LFQSLLYEACGRTVNP GAVGLLW+GNW VCQAAVETVL+GGSL+P Sbjct: 63 LFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKP 109
>tr|B7XG93|B7XG93_ARATH ASYMMETRIC LEAVES2-like 39 protein OS=Arabidopsis thaliana GN=ASL39 PE=2 SV=1 Length = 250
Score = 194 bits (492), Expect = 4e-48 Identities = 101/181 (55%), Positives = 124/181 (68%), Gaps = 10/181 (5%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCS+ CILR +QWIE+ +AQGHATVF+AKFFGRAG++SFISAV +SQRPA Sbjct: 3 CNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRPAAACMP------- 341 LFQSLLYEACGRTVNP GA+G+LW+GNW +CQAAVETVL+GGSLRP + Sbjct: 63 LFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAG 122
Query: 342 -ALPTKPTHSLTCRS--NLPPLTNASPTLTTPSNQSLKRTQSAQPSAEAPVKRVKICVQQ 512 PT S C NL + + S S R++S S+ +P KR ++ + Sbjct: 123 FPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSS-SPTKRKRLSSED 181
Query: 513 Q 515 Q Sbjct: 182 Q 182
>tr|A9S1K7|A9S1K7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_47789 PE=4 SV=1 Length = 109
Score = 194 bits (492), Expect = 4e-48 Identities = 90/107 (84%), Positives = 98/107 (91%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCSD CILR LQWIE+ EAQGHATVF+AKFFGRAG++ FISAV E+QR A Sbjct: 3 CNGCRVLRKGCSDNCILRPCLQWIETSEAQGHATVFVAKFFGRAGLMGFISAVPENQRSA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 323 LFQSLLYEACGRTVNP FGAVGLLWSGNW +CQAAV+TVLKGG+LRP Sbjct: 63 LFQSLLYEACGRTVNPVFGAVGLLWSGNWQICQAAVDTVLKGGTLRP 109
>tr|A9PK79|A9PK79_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 242
Score = 193 bits (490), Expect = 8e-48 Identities = 93/117 (79%), Positives = 103/117 (88%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCS+ CILR LQWIESPEAQGHATVF+AKFFGRAG++SFIS+V E QRP+ Sbjct: 3 CNGCRVLRKGCSENCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISSVPEDQRPS 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRPAAACMPALPT 353 LFQSLL+EACGRTVNP GAVGLLW+GNW VCQAAVETVL+GG+LRP MP L T Sbjct: 63 LFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRP----MPDLLT 115
>tr|Q0PN09|Q0PN09_9FABA Lateral organ boundaries domain protein OS=Caragana korshinskii PE=2 SV=1 Length = 231
Score = 190 bits (483), Expect = 5e-47 Identities = 87/107 (81%), Positives = 100/107 (93%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCS++CILR LQW+E+PEAQGHATVF+AKFFGRAG++SF+S V E+QRPA Sbjct: 3 CNGCRVLRKGCSESCILRPCLQWLENPEAQGHATVFVAKFFGRAGLMSFLSNVPETQRPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 323 LFQSLL+EACGRTVNP GAVGLLW+GNW VCQAAVETVL+GG+LRP Sbjct: 63 LFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLQGGTLRP 109
>tr|A9T578|A9T578_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48199 PE=4 SV=1 Length = 107
Score = 189 bits (481), Expect = 8e-47 Identities = 88/105 (83%), Positives = 98/105 (93%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCS++CILR LQWI+S +AQGHATVF+AKFFGRAG++SFI+AV E+QRPA Sbjct: 3 CNGCRVLRKGCSESCILRPCLQWIDSADAQGHATVFVAKFFGRAGLMSFITAVPENQRPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSL 317 LFQSLLYEACGRTVNP FGAVGLLW+GNW VCQAAVETVLKGG L Sbjct: 63 LFQSLLYEACGRTVNPVFGAVGLLWAGNWQVCQAAVETVLKGGVL 107
>tr|A9RNM5|A9RNM5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_117206 PE=4 SV=1 Length = 107
Score = 187 bits (476), Expect = 3e-46 Identities = 87/105 (82%), Positives = 96/105 (91%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCS+ CILR LQWI+S +AQGHATVF+AKFFGRAG++ FI+AV E+QRPA Sbjct: 3 CNGCRVLRKGCSEACILRPCLQWIDSADAQGHATVFVAKFFGRAGLMGFITAVPENQRPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSL 317 LFQSLLYEACGRTVNP FGAVGLLW+GNW VCQAAVETVLKGG L Sbjct: 63 LFQSLLYEACGRTVNPVFGAVGLLWAGNWQVCQAAVETVLKGGVL 107
>tr|B7XG95|B7XG95_ARATH ASYMMETRIC LEAVES2-like 41 protein OS=Arabidopsis thaliana GN=ASL41 PE=2 SV=1 Length = 240
Score = 187 bits (474), Expect = 5e-46 Identities = 87/107 (81%), Positives = 98/107 (91%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCS+TCILR LQWIES E+QGHATVF+AKFFGRAG++SFIS+V E QRPA Sbjct: 3 CNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 323 LFQSLL+EACGRTVNP GAVG+LW+ NW VCQAAVETVL+GG+LRP Sbjct: 63 LFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRP 109
>tr|A7NU79|A7NU79_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014946001 PE=4 SV=1 Length = 222
Score = 186 bits (473), Expect = 7e-46 Identities = 88/119 (73%), Positives = 105/119 (88%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCSD+CILR+ LQWIE+PEAQG+AT+F++KFFGR+ ++SFISAV E++RPA Sbjct: 3 CNGCRVLRKGCSDSCILRTCLQWIENPEAQGYATLFVSKFFGRSDLMSFISAVPENKRPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRPAAACMPALPTKP 359 LFQSLL+EACGRTVNP GAVGLLW+GNW VCQAAV+TVL GG+LRP + A P KP Sbjct: 63 LFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLAGGTLRPIPGIL-AGPIKP 120
>tr|Q6AV61|Q6AV61_ORYSJ Os03g0445700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0035N15.7 PE=2 SV=1 Length = 204
Score = 183 bits (465), Expect = 6e-45 Identities = 83/107 (77%), Positives = 97/107 (90%) Frame = +3
Query: 3 CNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQRPA 182 CNGCRVLRKGCSD C+LR LQWI++ +AQGHATVF+AKFFGRAG++SFISAV E+QRPA Sbjct: 3 CNGCRVLRKGCSDGCVLRPCLQWIDAADAQGHATVFVAKFFGRAGLLSFISAVPEAQRPA 62
Query: 183 LFQSLLYEACGRTVNPGFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 323 LFQSLLYEA GRT+NP GAVGLLW+GNW +CQAAVETVL+GG++ P Sbjct: 63 LFQSLLYEAAGRTINPVHGAVGLLWTGNWPLCQAAVETVLRGGAIGP 109
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