| DK960630 |
| Clone id |
TST39A01NGRL0007_P01 |
| Library |
TST39 |
| Length |
581 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_P01. 5' end sequence. |
| Accession |
DK960630 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL2500Contig1 |
| Sequence |
CAAGAATGTAGCATTTGGCGCAAAGAATAAGGTTGCTCAGCAAGGCCCTCCTCGACTGCG
TGAGCAAGAGTCTGCTGAAGCAGGAGGGCCTTCGCCGATTTCAGATCTTGATGAAGGTTC
AGAGCCAGTTAAGAAGTTGCAAGTTGTCAAGGCTTCTGTAGGTGAAAACAAGGAAGAAAG
TGGTGAAAGGCTTGAACCAGAAAGCTTCTCAGTCAGCAGAAATAAGCTGGAGCCAAATGC
TGATGGAGAGTTACAACATGGCCTAGGAAGAGAGACTGCAGAAGAGGTCGCATCGGGGAA
AGGGGAATGTAAGCAAGATGGCTCAGAAAAGGTTGTGTCAGGCACAGAGGAGCGTAAGCA
AGATGGTTCAGAGAAAGACTCAGCATCAGGTCAGCCCAATTCACGACCAATTGATCGGAA
ACCCACTGAAGATGCTTTAGCTACTGCAAAGGAACGGTTTTTAGCTCGCAAGAGGATGCG
AACGACCTAAGCAATGGCCCCATTACATGCAAGTAGGCACTGCGCATCGCAGCTTTTCTT
ATGTCAAGAATATGATGGGCTGTATAGCTTGGTGTAAAAAG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P70663 |
| Definition |
sp|P70663|SPRL1_MOUSE SPARC-like protein 1 OS=Mus musculus |
| Align length |
129 |
| Score (bit) |
44.3 |
| E-value |
0.0004 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960630|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_P01, 5'
(581 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P70663|SPRL1_MOUSE SPARC-like protein 1 OS=Mus musculus GN=Sp... 44 4e-04
sp|Q9MEF2|YCF2_OENEH Protein ycf2 OS=Oenothera elata subsp. hook... 43 0.001
sp|B0Z503|YCF2_OENBI Protein ycf2 OS=Oenothera biennis GN=ycf2-A... 42 0.003
sp|Q9QYB8|ADDB_MOUSE Beta-adducin OS=Mus musculus GN=Add2 PE=1 SV=4 42 0.003
sp|Q9P2H5|UBP35_HUMAN Ubiquitin carboxyl-terminal hydrolase 35 O... 41 0.004
sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel bet... 41 0.005
sp|Q86TD4|SRCA_HUMAN Sarcalumenin OS=Homo sapiens GN=SRL PE=2 SV=2 40 0.008
sp|P54938|NFM_RABIT Neurofilament medium polypeptide (Fragment) ... 40 0.008
sp|Q555V7|VID27_DICDI VID27-like protein OS=Dictyostelium discoi... 39 0.024
sp|Q9JL35|NSBP1_MOUSE Nucleosome-binding protein 1 OS=Mus muscul... 39 0.024
sp|Q6P2Y1|PAF1_XENTR RNA polymerase II-associated factor 1 homol... 38 0.032
sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens ... 38 0.042
sp|Q5RB63|HTSF1_PONAB HIV Tat-specific factor 1 homolog OS=Pongo... 37 0.054
sp|Q9H307|PININ_HUMAN Pinin OS=Homo sapiens GN=PNN PE=1 SV=4 37 0.093
sp|O77788|NFM_BOVIN Neurofilament medium polypeptide OS=Bos taur... 37 0.093
sp|P0C1J2|CWC27_RHIOR Peptidyl-prolyl isomerase cwc27 OS=Rhizopu... 37 0.093
sp|B0Z4R9|YCF2_OENAR Protein ycf2 OS=Oenothera argillicola GN=yc... 36 0.12
sp|Q6IPX3|TCAL6_HUMAN Transcription elongation factor A protein-... 36 0.12
sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus muscu... 36 0.12
sp|O94248|MDN1_SCHPO Midasin OS=Schizosaccharomyces pombe GN=mdn... 36 0.12
sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Ratt... 36 0.12
sp|Q8G6W1|DNAK_BIFLO Chaperone protein dnaK OS=Bifidobacterium l... 36 0.12
sp|Q3SXY8|AR13B_HUMAN ADP-ribosylation factor-like protein 13B O... 36 0.12
sp|Q6CF40|EAF7_YARLI Chromatin modification-related protein EAF7... 36 0.16
sp|Q4WP96|SPT5_ASPFU Transcription elongation factor spt5 OS=Asp... 35 0.21
sp|P79122|PININ_BOVIN Pinin OS=Bos taurus GN=PNN PE=2 SV=3 35 0.21
sp|Q63189|PRG2_RAT Bone marrow proteoglycan OS=Rattus norvegicus... 35 0.27
sp|P07197|NFM_HUMAN Neurofilament medium polypeptide OS=Homo sap... 35 0.27
sp|P13813|110KD_PLAKN 110 kDa antigen (Fragment) OS=Plasmodium k... 35 0.27
sp|B0Z587|YCF2_OENGL Protein ycf2 OS=Oenothera glazioviana GN=yc... 35 0.35
>sp|P70663|SPRL1_MOUSE SPARC-like protein 1 OS=Mus musculus
GN=Sparcl1 PE=2 SV=2
Length = 650
Score = 44.3 bits (103), Expect = 4e-04
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 62 EQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNA 241
E+E + G PS + +EG EP+++ K N+E+S + LE S +K E +
Sbjct: 205 EEEPEDIGAPS--DNQEEGKEPLEEQPTSKWE--GNREQSDDTLEESSQPTQISKTEKH- 259
Query: 242 DGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASG---QPNSRPI 412
Q G + E + +GE K GS++ + TE++ Q+G A G + + +
Sbjct: 260 ----QSEQGNQGQESDSEAEGEDKAAGSKEHIPHTEQQDQEGKAGLEAIGNQKDTDEKAV 315
Query: 413 DRKPTEDAL 439
+PT+ A+
Sbjct: 316 STEPTDAAV 324
>sp|Q9MEF2|YCF2_OENEH Protein ycf2 OS=Oenothera elata subsp. hookeri
GN=ycf2-A PE=3 SV=2
Length = 2340
Score = 42.7 bits (99), Expect = 0.001
Identities = 28/92 (30%), Positives = 47/92 (51%)
Frame = +2
Query: 110 DEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNADGELQHGLGRETAEEV 289
+EG ++++ + GE EE E E E + ++E D E G T +E
Sbjct: 1913 EEGEGTEEEVEGTEDEEGEGTEEEVEGTEDEEGEGTEEEVEGTEDEE-----GEGTEDEE 1967
Query: 290 ASGKGECKQDGSEKVVSGTEERKQDGSEKDSA 385
G E + +G+E+ V GTE+ + +G+EKDS+
Sbjct: 1968 GEGTEE-EVEGTEEEVEGTEDEEGEGTEKDSS 1998
Score = 35.4 bits (80), Expect = 0.21
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +2
Query: 164 ENKEESGERLEPESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSG 343
E EE E E E + ++E D E G T EEV + E + +G+E+ V G
Sbjct: 1901 EGTEEEVEGTEDEEGEGTEEEVEGTEDEE-----GEGTEEEVEGTEDE-EGEGTEEEVEG 1954
Query: 344 TEERKQDGSEKDSASG 391
TE+ + +G+E + G
Sbjct: 1955 TEDEEGEGTEDEEGEG 1970
>sp|B0Z503|YCF2_OENBI Protein ycf2 OS=Oenothera biennis GN=ycf2-A PE=3
SV=1
Length = 2325
Score = 41.6 bits (96), Expect = 0.003
Identities = 30/91 (32%), Positives = 48/91 (52%)
Frame = +2
Query: 113 EGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNADGELQHGLGRETAEEVA 292
EG+E ++++ + GE EE E E E + ++E D E G T EEV
Sbjct: 1902 EGTE--EEVEGTEDEEGEGTEEEVEGTEDEEGEGTEEEVEGTEDEE-----GEGTEEEVE 1954
Query: 293 SGKGECKQDGSEKVVSGTEERKQDGSEKDSA 385
+ E +G+E+ V GTE+ + +G+EKDS+
Sbjct: 1955 GTEEEV--EGTEEEVEGTEDEEGEGTEKDSS 1983
>sp|Q9QYB8|ADDB_MOUSE Beta-adducin OS=Mus musculus GN=Add2 PE=1 SV=4
Length = 725
Score = 41.6 bits (96), Expect = 0.003
Identities = 34/119 (28%), Positives = 52/119 (43%)
Frame = +2
Query: 65 QESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNAD 244
Q ++AG SP + SE KK +V +A+ E ++PE V+ + EP+ +
Sbjct: 605 QSPSKAGTKSPAVSPSKTSEDTKKTEVSEANT------EPEPVKPEGLVVNGKEEEPSVE 658
Query: 245 GELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQPNSRPIDRK 421
L GLG+ T A G+ +D +E V SG S G P+ P +K
Sbjct: 659 EALSKGLGQMTTN--ADTDGDSYKDKTESVTSGPL----------SPEGSPSKSPSKKK 705
>sp|Q9P2H5|UBP35_HUMAN Ubiquitin carboxyl-terminal hydrolase 35
OS=Homo sapiens GN=USP35 PE=1 SV=2
Length = 1017
Score = 41.2 bits (95), Expect = 0.004
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Frame = +2
Query: 23 KNKVAQQGPPR---LREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEES---G 184
K+ + + PP + +S EAGG S + E E K+ + K VGE +E + G
Sbjct: 644 KHCITEDTPPTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEG 703
Query: 185 ERLEPESFSVSRNKLEPNADGELQH-------GLGRETAEEVASGKGECKQDGSEKVV 337
ER + E K+E + E + G G + SG+ C +GS V+
Sbjct: 704 EREKEEEVEEEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVL 761
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1
OS=Bos taurus GN=CNGB1 PE=1 SV=1
Length = 1394
Score = 40.8 bits (94), Expect = 0.005
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Frame = +2
Query: 23 KNKVAQQGP---PRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERL 193
K KV +Q P PR++E++ E + ++G E ++ + + GE KEE R
Sbjct: 339 KGKVVEQTPRELPRIQEEKEDEE------EEKEDGEEEEEEGREKEEEEGEEKEEEEGRE 392
Query: 194 EPESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSE 373
+ E +GE + GRE EE G+ E ++ ++ G + +++G E
Sbjct: 393 KEEE------------EGEKKEEEGREKEEE-EGGEKEDEEGREKEEEEGRGKEEEEGGE 439
Query: 374 KDSASGQPNSRPIDRKPTED 433
K+ G+ R+ ED
Sbjct: 440 KEEEEGRGKEEVEGREEEED 459
Score = 31.2 bits (69), Expect = 3.9
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 281 EEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQPNSRPIDRKPTEDALATAKE 454
+E + E K+DG E+ G E+ +++G EK+ G+ K E+ +E
Sbjct: 354 QEEKEDEEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEE 411
>sp|Q86TD4|SRCA_HUMAN Sarcalumenin OS=Homo sapiens GN=SRL PE=2 SV=2
Length = 932
Score = 40.0 bits (92), Expect = 0.008
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +2
Query: 71 SAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNADGE 250
S EAGG + +L E + V+ +V+ +V E E P S L NA+ E
Sbjct: 170 SGEAGGQAGGHELPEEVQEVQGDSLVQGAVAGTAEPKAEGASPHSEGDGVGPL--NAEAE 227
Query: 251 LQHGLGRETA-----EEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQPNSRPID 415
G G E A +VA+ GE + D + GTE++ + G ++++ ++ +
Sbjct: 228 GSPGPGEEPAVPEGAPDVAAVGGESEPDIDTQASEGTEDQGEPGPAAEASAEPGGAQSVK 287
Query: 416 RKPTEDALA 442
TE++ A
Sbjct: 288 AGDTEESQA 296
Score = 30.8 bits (68), Expect = 5.1
Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 7/137 (5%)
Frame = +2
Query: 20 AKNKVAQQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEP 199
A QG P + SAE GG + D ++ A ++EESG+
Sbjct: 260 ASEGTEDQGEPGPAAEASAEPGGAQSVKAGDTEESQAPEMTEEDADEASSEEESGDGSGS 319
Query: 200 E------SFSVSRNKLEPNADGELQHGLGRETAEEVASGK-GECKQDGSEKVVSGTEERK 358
E S S A E G E E +G+ E ++ + EE +
Sbjct: 320 EEEGGVPSEEESEEDSGDGASSEEAEGASEEATEPQEAGEPQEAREPQEGGDLQEAEESQ 379
Query: 359 QDGSEKDSASGQPNSRP 409
+ G +++ Q P
Sbjct: 380 EGGDPQEAEEPQEGGAP 396
Score = 30.0 bits (66), Expect = 8.7
Identities = 30/133 (22%), Positives = 53/133 (39%)
Frame = +2
Query: 38 QQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVS 217
Q+G +ES E G P + EG P + G +E G +P+
Sbjct: 367 QEGGDLQEAEESQEGGDPQEAEEPQEGGAPQE---------GGEPQEGG---DPQEAREP 414
Query: 218 RNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQP 397
+ EP EL G + + + G ++ +E + S T + K + E + G+
Sbjct: 415 QEAREPQEGAELPEATGTTSHRDRGAQPGP-EELNTESMGSETLDMKAEEPE-EGHQGRE 472
Query: 398 NSRPIDRKPTEDA 436
+ + ++ TEDA
Sbjct: 473 SPIIVAQEETEDA 485
>sp|P54938|NFM_RABIT Neurofilament medium polypeptide (Fragment)
OS=Oryctolagus cuniculus GN=NEFM PE=2 SV=1
Length = 644
Score = 40.0 bits (92), Expect = 0.008
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 KNVAFGAKNKVAQQGPPRLREQESAEAG--GPSPISDLDEGSEPVKKLQVVKASVGENKE 175
K G + + + P +E+E +AG G S D+GS+ KK + GE KE
Sbjct: 480 KPTKVGLEKETKEGEKPLQQEKEKEKAGEEGGSEEEGSDQGSKRAKKEDIAVNGEGEGKE 539
Query: 176 ESGERLEPESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEER 355
E EPE+ + E G + +GL A+E G D SE+ V T++
Sbjct: 540 EE----EPETKEKGSGREEEK--GVVTNGLDLSPADEKKGG------DRSEEKVVVTKKV 587
Query: 356 KQDGSEKDSASGQPNSRPIDRKPTEDALATAKERFLARKRM 478
++ +E + + ++ + + E+ T +E+ ++ K++
Sbjct: 588 EKITTEGGDGATKYITKSVTAQKVEEHEETFEEKLVSTKKV 628
Score = 35.4 bits (80), Expect = 0.21
Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 15/145 (10%)
Frame = +2
Query: 62 EQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNA 241
E++ EA G + +E KK VKA+ E KEE GE+ E + E
Sbjct: 273 EEKEEEAEGKEEEQEAEEEVAAAKK-SPVKATTPEIKEEEGEKEEEGQEEEEEEEDEGVK 331
Query: 242 DGELQHGLGRETAEEVASG---KGECKQDGSEKVVSGTEERK-QDGSEKDSASGQPNSR- 406
+ + G + G +GE + +G + EE+K ++ SE+ +A +P +
Sbjct: 332 SDQAEEGGSEKEGSSKNEGEQEEGETEAEGEVEEAEAKEEKKTEEKSEEVAAKEEPVTEA 391
Query: 407 ----------PIDRKPTEDALATAK 451
P+ + P E+ A+
Sbjct: 392 KVGKPEKAKSPVPKSPVEEVKPKAE 416
>sp|Q555V7|VID27_DICDI VID27-like protein OS=Dictyostelium
discoideum GN=DDB_G0274813 PE=3 SV=1
Length = 938
Score = 38.5 bits (88), Expect = 0.024
Identities = 28/117 (23%), Positives = 54/117 (46%)
Frame = +2
Query: 104 DLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNADGELQHGLGRETAE 283
+LD+ S+ ++ + + GE +EESGE E ES E ++ + +E E
Sbjct: 441 ELDQESDDDEEDEEDEEESGEEEEESGEEEEEESSE------EEQVKQPVKKPIKQEPKE 494
Query: 284 EVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQPNSRPIDRKPTEDALATAKE 454
E + E +++ SE+ +E + + E++S + N R + R P ++E
Sbjct: 495 ESEEEESEEEEEESEEEEEESEGEESEEEEEESEEEKDNGRKVFRVPLRKPTTESEE 551
>sp|Q9JL35|NSBP1_MOUSE Nucleosome-binding protein 1 OS=Mus musculus
GN=Nsbp1 PE=1 SV=2
Length = 406
Score = 38.5 bits (88), Expect = 0.024
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 9/141 (6%)
Frame = +2
Query: 38 QQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVS 217
++G E E D EG +K VK E +E+ G+ E E+ V
Sbjct: 178 EKGDNEKGEDGKEEGDEKEEEKDDKEGDTGTEK--EVKEQNKEAEEDDGKCKEEENKEVG 235
Query: 218 RNKLEPNADG--ELQHGLGRETAEEVASGKGECKQDGSE-------KVVSGTEERKQDGS 370
+ +P DG +L +G+E E +G+ ++DG E K E+ K+
Sbjct: 236 KEG-QPEEDGKEDLHEEVGKEDLHEEDGKEGQPEEDGKEIHHEEDGKEGQPEEDGKEYLH 294
Query: 371 EKDSASGQPNSRPIDRKPTED 433
E+D GQP + +P ED
Sbjct: 295 EEDGEEGQPKEDQKEGQPEED 315
Score = 33.5 bits (75), Expect = 0.79
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 23/142 (16%)
Frame = +2
Query: 23 KNKVAQQGPPRLREQESAEAGGPSP------------ISDLDEGSEPVKKLQVVKASVGE 166
+NK A++ + +E+E+ E G + D E K+ Q +
Sbjct: 215 QNKEAEEDDGKCKEEENKEVGKEGQPEEDGKEDLHEEVGKEDLHEEDGKEGQPEEDGKEI 274
Query: 167 NKEESGERLEPESFSVSRNKLEPNADGELQHGL--------GRETAEEVASGKGECKQDG 322
+ EE G+ +PE E +G+ + G+E E +G+CK+DG
Sbjct: 275 HHEEDGKEGQPEEDGKEYLHEEDGEEGQPKEDQKEGQPEEDGKEDQPEEDGKEGQCKEDG 334
Query: 323 SE--KVVSGTEE-RKQDGSEKD 379
E G E+ ++DG EKD
Sbjct: 335 KEGHHEEGGKEDLHEEDGKEKD 356
Score = 30.4 bits (67), Expect = 6.7
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Frame = +2
Query: 17 GAKNKVAQQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLE 196
G + + + G L E++ E P D EG EE G+ +
Sbjct: 280 GKEGQPEEDGKEYLHEEDGEEG---QPKEDQKEGQP----------------EEDGKEDQ 320
Query: 197 PESFSVSRNKLEPNADGELQHG----LGRETAEEVASGKGECKQDGSEKVV--SGTEERK 358
PE E +G + G L E +E GK + K++G ++V G++E K
Sbjct: 321 PEEDGKEGQCKEDGKEGHHEEGGKEDLHEEDGKEKDGGKEDRKEEGEQEVAVDEGSDENK 380
Query: 359 QDGSEK 376
+ E+
Sbjct: 381 VEAEEE 386
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q8S8I5 |
| Definition |
tr|Q8S8I5|Q8S8I5_ARATH Expressed protein (Putative uncharacterized protein At2g27280) (Putative uncharacterized protein At2g27285) (Putative uncharacterized protein) OS=Arabidopsis thaliana |
| Align length |
166 |
| Score (bit) |
54.3 |
| E-value |
5.0e-06 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960630|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_P01, 5'
(581 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q8S8I5|Q8S8I5_ARATH Expressed protein (Putative uncharacteriz... 54 5e-06
tr|Q56PB6|Q56PB6_SHEEP RPGR (Fragment) OS=Ovis aries PE=2 SV=1 47 8e-04
tr|B7FNC6|B7FNC6_MEDTR Putative uncharacterized protein OS=Medic... 46 0.002
tr|Q56PC2|Q56PC2_9PRIM RPGR (Fragment) OS=Gorilla gorilla PE=2 SV=1 45 0.002
tr|Q3UYK7|Q3UYK7_MOUSE Putative uncharacterized protein OS=Mus m... 44 0.005
tr|Q3TYD5|Q3TYD5_MOUSE Putative uncharacterized protein OS=Mus m... 44 0.005
tr|B4QIY9|B4QIY9_DROSI GD14425 OS=Drosophila simulans GN=GD14425... 44 0.005
tr|Q2W0A5|Q2W0A5_MAGMM CobT protein OS=Magnetospirillum magnetic... 43 0.011
tr|B8CPZ2|B8CPZ2_9GAMM TPR repeat protein OS=Shewanella piezotol... 43 0.015
tr|Q55DZ3|Q55DZ3_DICDI Putative uncharacterized protein OS=Dicty... 43 0.015
tr|Q1KX17|Q1KX17_LYTVA Endo16 OS=Lytechinus variegatus GN=Endo16... 42 0.019
tr|B6PZS2|B6PZS2_BRAFL Putative uncharacterized protein OS=Branc... 42 0.019
tr|B4ML97|B4ML97_DROWI GK17504 OS=Drosophila willistoni GN=GK175... 42 0.019
tr|A2D8J4|A2D8J4_TRIVA Putative uncharacterized protein OS=Trich... 42 0.019
tr|B3NCY9|B3NCY9_DROER GG15622 OS=Drosophila erecta GN=GG15622 P... 42 0.025
tr|B3KPE1|B3KPE1_HUMAN cDNA FLJ31669 fis, clone NT2RI2004962, hi... 42 0.025
tr|Q55MA4|Q55MA4_CRYNE Putative uncharacterized protein OS=Crypt... 42 0.025
tr|Q0H0T5|Q0H0T5_OENBI Probable ATPase (Fragment) OS=Oenothera b... 42 0.032
tr|B7UBF1|B7UBF1_BLAHY Neurofilament medium tail domain (Fragmen... 41 0.042
tr|B4DRS4|B4DRS4_HUMAN cDNA FLJ60139, highly similar to Homo sap... 41 0.042
tr|A2RRA6|A2RRA6_HUMAN USP35 protein OS=Homo sapiens GN=USP35 PE... 41 0.042
tr|Q0C8E2|Q0C8E2_ASPTN Predicted protein OS=Aspergillus terreus ... 41 0.042
tr|Q8C0Y2|Q8C0Y2_MOUSE Putative uncharacterized protein (Fragmen... 41 0.055
tr|Q4DU22|Q4DU22_TRYCR Mucin-associated surface protein (MASP), ... 41 0.055
tr|B6MSR0|B6MSR0_BRAFL Putative uncharacterized protein OS=Branc... 41 0.055
tr|B5STL4|B5STL4_CRYPV Retinitis pigmentosa GTPase regulator (Fr... 41 0.055
tr|Q756Y1|Q756Y1_ASHGO AER133Cp OS=Ashbya gossypii GN=AER133C PE... 41 0.055
tr|Q90307|Q90307_CARAU Carassius auratus OS=Carassius auratus PE... 40 0.072
tr|Q07LD5|Q07LD5_RHOP5 Putative uncharacterized protein OS=Rhodo... 40 0.072
tr|A1XX44|A1XX44_9MAGN Chloroplast bromodomain-containing protei... 40 0.072
>tr|Q8S8I5|Q8S8I5_ARATH Expressed protein (Putative uncharacterized
protein At2g27280) (Putative uncharacterized protein
At2g27285) (Putative uncharacterized protein)
OS=Arabidopsis thaliana GN=At2g27280 PE=2 SV=1
Length = 323
Score = 54.3 bits (129), Expect = 5e-06
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Frame = +2
Query: 2 KNVAFGAKNKVAQQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVG--ENKE 175
KNVAFGA+ A++ +L EQ AE L+E +KL+ ++ V E K
Sbjct: 183 KNVAFGAREVEAKEAE-KLEEQRKAEK--------LEE-QRKAEKLEELRKEVTRVEKKR 232
Query: 176 ESGER-LEPES--FSVSRNK-LEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSG 343
+S E+ + P+S F SR+K LEP AE+ S K + GS+ G
Sbjct: 233 KSPEKEVSPDSGEFGSSRSKSLEPLE------------AEQAVSEK----EMGSD----G 272
Query: 344 TEERKQDGSEKDSASGQPNSRPIDRKPTEDALATAKERFLARKRMR 481
TEERK S K++A P + D+K EDA+A AKERFLARK+ +
Sbjct: 273 TEERKS--SIKEAAKEVPKAIN-DQKRREDAIAAAKERFLARKKAK 315
>tr|Q56PB6|Q56PB6_SHEEP RPGR (Fragment) OS=Ovis aries PE=2 SV=1
Length = 575
Score = 47.0 bits (110), Expect = 8e-04
Identities = 32/123 (26%), Positives = 55/123 (44%)
Frame = +2
Query: 38 QQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVS 217
++G +E E GG + EG E +++ + + E +E GE E
Sbjct: 359 EEGDGEQEGEEEEEGGGGEGEEEEGEGEEELEEGEGEEEGEAEGEEGEGEEEE------- 411
Query: 218 RNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQP 397
GE + G G + E G+GE +++G E+V G EER+++G+E++ G
Sbjct: 412 ---------GEEKEGEGEKEGEG-PGGEGEEEEEGEERVEEGEEEREREGTEREEKEGAV 461
Query: 398 NSR 406
R
Sbjct: 462 GKR 464
Score = 38.9 bits (89), Expect = 0.21
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Frame = +2
Query: 17 GAKNKVAQQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEES----- 181
G + + ++G E E E G + +E + + + K GE +EE
Sbjct: 201 GGEEEGDREGQEGEEEGEGEEEGEGEEEGEGEEEGDGKGQEEEEKGKEGEGEEEEDGEGQ 260
Query: 182 -GERLEPESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEER- 355
GE E E E DGE Q G E EE G+GE + DG E+ G EE
Sbjct: 261 EGEEEEEEGDGEGEEGAEEE-DGEGQEG--EEEEEEEGDGEGEEEGDGEEQKAEGGEEEG 317
Query: 356 ----KQDGSEKDSASGQ 394
++ G EK+ G+
Sbjct: 318 DGEVEEVGDEKEGEWGE 334
Score = 34.7 bits (78), Expect = 4.0
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Frame = +2
Query: 41 QGPPRLR-EQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVS 217
+G +LR E E GG I EG+ V++ + GE E+ GE +
Sbjct: 50 EGKGKLRGEAEHVPEGGGKGIRK--EGNSGVEQRSRTGSEEGEEGEDVGEGVIETLGKGE 107
Query: 218 RNKLEPNADGELQHG------LGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKD 379
++ E E + G +GR+ A + G GE ++ G E+ ++ K++G EK+
Sbjct: 108 KDLEEEEQQKEREQGHQEERSIGRKEAGKREQGGGEGEEAGEEEGEEEKDKEKEEGKEKE 167
>tr|B7FNC6|B7FNC6_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 313
Score = 45.8 bits (107), Expect = 0.002
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 7/167 (4%)
Frame = +2
Query: 2 KNVAFGAKNKVAQQGPPRL-------REQESAEAGGPSPISDLDEGSEPVKKLQVVKASV 160
KNVAFGAK+ ++ R RE S +A + DE + K + S
Sbjct: 181 KNVAFGAKDAQGRKRDNRAENRVLEKREGMSPDASNQHQDGNTDEEQHSLAKTSSPEESP 240
Query: 161 GENKEESGERLEPESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVS 340
G+ + GE + S S + PN D +AEE
Sbjct: 241 GKKIGDQGETSNLSNISASPLAMRPNPDA---------SAEE------------------ 273
Query: 341 GTEERKQDGSEKDSASGQPNSRPIDRKPTEDALATAKERFLARKRMR 481
+ E+ AS QPN P K ++DA+A AKERFLARKR +
Sbjct: 274 ------KSPVEQPPAS-QPN--PEHHKRSQDAVAAAKERFLARKRAK 311
>tr|Q56PC2|Q56PC2_9PRIM RPGR (Fragment) OS=Gorilla gorilla PE=2 SV=1
Length = 549
Score = 45.4 bits (106), Expect = 0.002
Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Frame = +2
Query: 17 GAKNKVAQQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEE------ 178
G + K +QG + R QE E GG + EG E + + GE KEE
Sbjct: 124 GQEQKEREQGHQKERNQEMEEGGGE---EEHGEGEEEEGDREEEEEKEGEGKEEGEGEEV 180
Query: 179 SGERLEPESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERK 358
GER + E + GE + G E EE G+GE K++G E V G ER+
Sbjct: 181 EGEREKEEGERKKEERAGKEEKGE-EEGDQGEGEEEETEGRGEEKEEGGE-VEEGKGERE 238
Query: 359 QDGSE 373
++ E
Sbjct: 239 EEEEE 243
Score = 33.9 bits (76), Expect = 6.8
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = +2
Query: 17 GAKNKVAQQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGE-RL 193
G + K ++G E+E E G + +EG E V+ GE +EE E
Sbjct: 198 GKEEKGEEEGDQGEGEEEETEGRG----EEKEEGGE-------VEEGKGEREEEEEEGEG 246
Query: 194 EPESFSVSRNKLEPNADGELQHGLGR------ETAEEVASGKGECKQDGSEKVVSGTEER 355
E E + K E +GE + G G+ E EE G+GE + +G + E
Sbjct: 247 EEEEWEGEEEKGE--GEGEEEEGEGKGEEEGEEGEEEEGEGEGEEEGEGEGEEEGEGEGE 304
Query: 356 KQDGSEKDSASGQ 394
+++G K G+
Sbjct: 305 EEEGEGKGEEEGE 317
>tr|Q3UYK7|Q3UYK7_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Sparcl1 PE=2 SV=1
Length = 650
Score = 44.3 bits (103), Expect = 0.005
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 62 EQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNA 241
E+E + G PS + +EG EP+++ K N+E+S + LE S +K E +
Sbjct: 205 EEEPEDIGAPS--DNQEEGKEPLEEQPTSKWE--GNREQSDDTLEESSQPTQISKTEKH- 259
Query: 242 DGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASG---QPNSRPI 412
Q G + E + +GE K GS++ + TE++ Q+G A G + + +
Sbjct: 260 ----QSEQGNQGQESDSEAEGEDKAAGSKEHIPHTEQQDQEGKAGLEAIGNQKDTDEKAV 315
Query: 413 DRKPTEDAL 439
+PT+ A+
Sbjct: 316 STEPTDAAV 324
>tr|Q3TYD5|Q3TYD5_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Sparcl1 PE=2 SV=1
Length = 650
Score = 44.3 bits (103), Expect = 0.005
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 62 EQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEPNA 241
E+E + G PS + +EG EP+++ K N+E+S + LE S +K E +
Sbjct: 205 EEEPEDIGAPS--DNQEEGKEPLEEQPTSKWE--GNREQSDDTLEESSQPTQISKTEKH- 259
Query: 242 DGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASG---QPNSRPI 412
Q G + E + +GE K GS++ + TE++ Q+G A G + + +
Sbjct: 260 ----QSEQGNQGQESDSEAEGEDKAAGSKEHIPHTEQQDQEGKAGLEAIGNQKDTDEKAV 315
Query: 413 DRKPTEDAL 439
+PT+ A+
Sbjct: 316 STEPTDAAV 324
>tr|B4QIY9|B4QIY9_DROSI GD14425 OS=Drosophila simulans GN=GD14425 PE=4
SV=1
Length = 954
Score = 44.3 bits (103), Expect = 0.005
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +2
Query: 47 PPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNK 226
P + R+Q + + S SD D +P +K Q + K+E R S S ++
Sbjct: 694 PKKSRDQSQSSSSDSSAESD-DSEEQPRRKKQPTNVETSKGKKEKVRRSSESSTSTEQSD 752
Query: 227 LEPNADGE--LQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQPN 400
E N+ G+ L+ L ++ ++EVA+ KG+ K+ EK ++++ + G+ +
Sbjct: 753 DEDNSSGDERLKKKLQQKKSKEVAALKGKEKEHEKEKDKRRSDKKSKRGAISSGDEESTS 812
Query: 401 SRPIDRKPT 427
SR K T
Sbjct: 813 SRKRGHKKT 821
>tr|Q2W0A5|Q2W0A5_MAGMM CobT protein OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=amb3916 PE=4 SV=1
Length = 629
Score = 43.1 bits (100), Expect = 0.011
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Frame = +2
Query: 56 LREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLEPESFSVSRNKLEP 235
LR+QE+ G +SDLD G++ Q +A EN E+SG+ + + + E
Sbjct: 197 LRDQEAFAKGLHRLLSDLDFGTD-----QASEAEDSENSEQSGQEQDAQGAGQEKEG-EQ 250
Query: 236 NADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQDGSEKDSASGQPNSRPID 415
G Q G + SG+ + G E +++G+ + G K + NS
Sbjct: 251 EGQGPQQEGDTQAPGSSEGSGEDDGTDSGEEMMLTGSGTEEPGGPSKQAQEQLSNSAAFQ 310
Query: 416 RKPTE------DALATAKE 454
+P + D + TA++
Sbjct: 311 DRPYKPYTTQYDQIVTAED 329
>tr|B8CPZ2|B8CPZ2_9GAMM TPR repeat protein OS=Shewanella
piezotolerans WP3 GN=swp_3146 PE=4 SV=1
Length = 639
Score = 42.7 bits (99), Expect = 0.015
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Frame = +2
Query: 161 GENKEESGERLEPESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVS 340
G+N++ S E+ E N+ + + DG+ +++ + SG+GE KQ S+ S
Sbjct: 456 GDNQKNSDEKQNSEDQQQKSNEQQSD-DGQQSDKESDDSSSDTDSGQGEQKQQPSDDTKS 514
Query: 341 G-----TEERKQDGSEKDSASGQPNSR--PIDRKPTE 430
G T E Q D+A +PNS P+D K ++
Sbjct: 515 GDDANDTAEESQQSGASDAAQNEPNSNDAPMDAKASD 551
>tr|Q55DZ3|Q55DZ3_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0190281 PE=4 SV=1
Length = 2221
Score = 42.7 bits (99), Expect = 0.015
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 4/157 (2%)
Frame = +2
Query: 23 KNKVAQQGPPRLREQESAEAGGPSPISDLDEGSEPVKKLQVVKASVGENKEESGERLE-- 196
+ K +Q P EQE + +E E VK+++ + E KEE E E
Sbjct: 2034 QEKQDEQEPEEQEEQEKQP-------EEEEEEEEKVKEIEQQEEEEEEPKEEQSEEEEEE 2086
Query: 197 -PESFSVSRNKLEPNADGELQHGLGRETAEEVASGKGECKQDGSEKVVSGTEERKQD-GS 370
PE + + GE Q G E EE K +++ EK + EE K+D
Sbjct: 2087 QPEEEQPEEEQTKEEQPGEEQPGEEEEEPEEEEEEKEPEEEEEEEKEMEEDEEEKEDEEE 2146
Query: 371 EKDSASGQPNSRPIDRKPTEDALATAKERFLARKRMR 481
EK+ + PI +P+ + + L+ MR
Sbjct: 2147 EKEDTPKKQPIVPISTRPSRQSKTDGIAKTLSIAEMR 2183
|