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NBDC - LSDB Archive
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DK960637
Clone id TST39A01NGRL0007_P08
Library
Length 593
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_P08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GAAGCTCGATGAGCCTGCTGAGGAGGTCGAAGATGAGGTAGAAGAAGACGACGAAGATGA
AGACGAAGAGGACGAAGAACAGCAGAATGGTGCTGCGCAGGGCGACGGTGGGGTCGATGC
TGACTGGGCGTCGTTTTTCAACGTCGATTTTACTAAAGAGCAAATCGTAGATCTTCTTTT
GCAGGCTGCGTTAGCGGATTCACAGGTTTTGAGCAAAATCAGGAAGCTTGCTGATAGGGA
TCCTGCCCACCGCAAGCTTTTTGTCAGAGGCCTCGGCTGGGATATAACTGTGGATTCCTT
GAAGGCTATCTTTGCGCAGTATGGGGAAATTGAAGAATGCTCTGTAATCAAAGATAAGCA
GACAGGTAAGAGCAAAGGCTACGGCTTTGTTACTTACAAGCACATGGATGCAGCTCGCCG
TGCTCTCAAAGAGCCCAGCAAGAAGATTGAAGGGCGGGTTACTGTGTCACAATTAGCATC
AGTTGGGCCATCTGTTCCATCAAATGATCAAAGTGGCCGCAAAATCTATGTGGGCAATGT
TCCACACGACCTTTCTGCTGAAAAGCTTCTCTCCGTGTTTGCCCAGTATGGGG
■■Homology search results ■■ -
sp_hit_id O94432
Definition sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe
Align length 114
Score (bit) 79.0
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960637|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_P08, 5'
         (593 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15...    79   2e-14
sp|Q76LC6|RBM24_DANRE RNA-binding protein 24 OS=Danio rerio GN=r...    78   4e-14
sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B...    77   6e-14
sp|Q5ZJX4|RBM38_CHICK RNA-binding protein 38 OS=Gallus gallus GN...    77   6e-14
sp|Q9BX46|RBM24_HUMAN RNA-binding protein 24 OS=Homo sapiens GN=...    77   6e-14
sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1...    77   8e-14
sp|Q32P51|ROA1L_HUMAN Heterogeneous nuclear ribonucleoprotein A1...    77   8e-14
sp|Q6P8A7|RBM24_XENTR RNA-binding protein 24 OS=Xenopus tropical...    77   8e-14
sp|Q5ZMA3|RBM24_CHICK RNA-binding protein 24 OS=Gallus gallus GN...    77   8e-14
sp|Q9I8B3|RB24B_XENLA RNA-binding protein 24-B OS=Xenopus laevis...    77   8e-14
sp|Q6GQD3|RB24A_XENLA RNA-binding protein 24-A OS=Xenopus laevis...    77   8e-14
sp|P04256|ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 OS...    76   1e-13
sp|A5A6H4|ROA1_PANTR Heterogeneous nuclear ribonucleoprotein A1 ...    76   1e-13
sp|P49312|ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 ...    76   1e-13
sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 ...    76   1e-13
sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 ...    76   1e-13
sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 ...    76   1e-13
sp|Q6DIV4|RBM38_XENTR RNA-binding protein 38 OS=Xenopus tropical...    76   1e-13
sp|Q9H0Z9|RBM38_HUMAN RNA-binding protein 38 OS=Homo sapiens GN=...    76   1e-13
sp|P0C7M2|RA1L3_HUMAN Putative heterogeneous nuclear ribonucleop...    76   1e-13
sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS...    75   2e-13
sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 ...    75   2e-13
sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 ...    75   2e-13
sp|P51992|RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 ...    75   2e-13
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G...    75   2e-13
sp|Q62176|RBM38_MOUSE RNA-binding protein 38 OS=Mus musculus GN=...    75   2e-13
sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M...    75   2e-13
sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H...    75   2e-13
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G...    75   2e-13
sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1,...    75   3e-13

>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15
           OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1
          Length = 474

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 38/114 (33%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
 Frame = +2

Query: 254 KLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKE 433
           K+F+ GL W+ T DSL+  F Q+GE+ +C+V++D  TG+S+G+GF+T+K+       + +
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223

Query: 434 PSKKIEGRVTVSQLASVGPSVPSNDQ-SGRKIYVGNVPHDLSAEKLLSVFAQYG 592
               ++G++   + A     +P  +Q    K++VG VP D + E+  + F Q+G
Sbjct: 224 -EHHLDGKIIDPKRA-----IPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFG 271



 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 28/95 (29%), Positives = 51/95 (53%)
 Frame = +2

Query: 254 KLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKE 433
           K+FV G+  D T +  +  F Q+G + + +++ DK TG+ +G+GFVTY++  A    + +
Sbjct: 248 KMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQ 307

Query: 434 PSKKIEGRVTVSQLASVGPSVPSNDQSGRKIYVGN 538
           P   I G+    + A+   S+  +    +  Y GN
Sbjct: 308 PYITIHGKPVEVKRATPKASLRDSHDRHQHGYHGN 342


>sp|Q76LC6|RBM24_DANRE RNA-binding protein 24 OS=Danio rerio
           GN=rbm24 PE=2 SV=1
          Length = 230

 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 41/84 (48%), Positives = 53/84 (63%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +D  + K+FV GL +  T  SL+  F  +GEIEE  VI D+QTGKS+GYGFVT     AA
Sbjct: 6   KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAA 65

Query: 416 RRALKEPSKKIEGRVTVSQLASVG 487
            RA K+P+  I+GR     LA +G
Sbjct: 66  DRACKDPNPIIDGRKANVNLAYLG 89


>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B
           OS=Mus musculus GN=Hnrnpab PE=1 SV=1
          Length = 285

 Score = 77.0 bits (188), Expect = 6e-14
 Identities = 36/113 (31%), Positives = 63/113 (55%)
 Frame = +2

Query: 254 KLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKE 433
           K+FV GL WD +   LK  F ++GE+ +C++  D  TG+S+G+GF+ +K   +  + L +
Sbjct: 76  KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135

Query: 434 PSKKIEGRVTVSQLASVGPSVPSNDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
              +++GRV   + A      P      +KI+VG +  + + EK+   F Q+G
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDPV-----KKIFVGGLNPEATEEKIREYFGQFG 183



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 23/73 (31%), Positives = 42/73 (57%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +DP  +K+FV GL  + T + ++  F Q+GEIE   +  D +  K +G+ F+T+K  D  
Sbjct: 155 KDPV-KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPV 213

Query: 416 RRALKEPSKKIEG 454
           ++ L++    + G
Sbjct: 214 KKVLEKKFHTVSG 226


>sp|Q5ZJX4|RBM38_CHICK RNA-binding protein 38 OS=Gallus gallus
           GN=RBM38 PE=2 SV=1
          Length = 215

 Score = 77.0 bits (188), Expect = 6e-14
 Identities = 45/99 (45%), Positives = 60/99 (60%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +D    K+FV GL +  T  SL+  F  +G+IEE  VI D+QTGKS+GYGFVT     AA
Sbjct: 6   KDTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65

Query: 416 RRALKEPSKKIEGRVTVSQLASVGPSVPSNDQSGRKIYV 532
            RA K+P+  I+GR     LA +G + P + Q+G  I V
Sbjct: 66  ERACKDPNPIIDGRKANVNLAYLG-AKPRSIQTGFTIGV 103


>sp|Q9BX46|RBM24_HUMAN RNA-binding protein 24 OS=Homo sapiens
           GN=RBM24 PE=1 SV=1
          Length = 236

 Score = 77.0 bits (188), Expect = 6e-14
 Identities = 41/84 (48%), Positives = 53/84 (63%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +D  + K+FV GL +  T  SL+  F  +GEIEE  VI D+QTGKS+GYGFVT     AA
Sbjct: 6   KDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAA 65

Query: 416 RRALKEPSKKIEGRVTVSQLASVG 487
            RA K+P+  I+GR     LA +G
Sbjct: 66  ERACKDPNPIIDGRKANVNLAYLG 89


>sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1
           homolog OS=Xenopus laevis GN=hnrnpa1 PE=2 SV=1
          Length = 365

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
 Frame = +2

Query: 251 RKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAARRALK 430
           RKLF+ GL ++ T +SL+  F Q+G + +C V++D  + +S+G+GFVTY   D    A+ 
Sbjct: 14  RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT 73

Query: 431 EPSKKIEGRVTVSQ--LASVGPSVPSNDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
               K++GRV   +  ++    S P    + +KI+VG +  D   + L   F QYG
Sbjct: 74  ARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYG 129



 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
 Frame = +2

Query: 221 RKLADRDPAH---RKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFV 391
           R+ + R  AH   +K+FV G+  D   D L+  F QYG+IE   ++ D+ +GK +G+ FV
Sbjct: 92  REDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151

Query: 392 TYKHMDAARR-------ALKEPSKKIEGRVTVSQLASVGPSVPSNDQSG 517
           T++  D+  +        +   + ++   ++  ++ASV  S      SG
Sbjct: 152 TFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEMASVSGSQRERGGSG 200


>sp|Q32P51|ROA1L_HUMAN Heterogeneous nuclear ribonucleoprotein
           A1-like protein OS=Homo sapiens GN=HNRNPA1L PE=2 SV=2
          Length = 320

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
 Frame = +2

Query: 251 RKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAARRALK 430
           RKLF+ GL ++ T +SL++ F Q+G + +C V++D  T +S+G+GFVTY  ++    A+ 
Sbjct: 14  RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73

Query: 431 EPSKKIEGRVTVSQ--LASVGPSVPSNDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
               K++GRV   +  ++      P    + +KI+VG +  D     L   F QYG
Sbjct: 74  TTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYG 129



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = +2

Query: 221 RKLADRDPAH---RKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFV 391
           R+ + R  AH   +K+FV G+  D     L+  F QYG+IE   ++ D+ +GK +G+ FV
Sbjct: 92  REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151

Query: 392 TYKHMDAARRALKEPSKKIEG 454
           T+   D+  + + +    ++G
Sbjct: 152 TFDDHDSVDKIVIQKYHTVKG 172


>sp|Q6P8A7|RBM24_XENTR RNA-binding protein 24 OS=Xenopus tropicalis
           GN=rbm24 PE=2 SV=1
          Length = 226

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 40/84 (47%), Positives = 53/84 (63%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +D  + K+FV GL +  T  SL+  F  +G+IEE  VI D+QTGKS+GYGFVT     AA
Sbjct: 6   KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65

Query: 416 RRALKEPSKKIEGRVTVSQLASVG 487
            RA K+P+  I+GR     LA +G
Sbjct: 66  ERACKDPNPIIDGRKANVNLAYLG 89


>sp|Q5ZMA3|RBM24_CHICK RNA-binding protein 24 OS=Gallus gallus
           GN=RBM24 PE=2 SV=2
          Length = 225

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 40/84 (47%), Positives = 53/84 (63%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +D  + K+FV GL +  T  SL+  F  +G+IEE  VI D+QTGKS+GYGFVT     AA
Sbjct: 6   KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65

Query: 416 RRALKEPSKKIEGRVTVSQLASVG 487
            RA K+P+  I+GR     LA +G
Sbjct: 66  ERACKDPNPIIDGRKANVNLAYLG 89


>sp|Q9I8B3|RB24B_XENLA RNA-binding protein 24-B OS=Xenopus laevis
           GN=rbm24-B PE=2 SV=1
          Length = 224

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 40/84 (47%), Positives = 53/84 (63%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +D  + K+FV GL +  T  SL+  F  +G+IEE  VI D+QTGKS+GYGFVT     AA
Sbjct: 6   KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65

Query: 416 RRALKEPSKKIEGRVTVSQLASVG 487
            RA K+P+  I+GR     LA +G
Sbjct: 66  ERACKDPNPIIDGRKANVNLAYLG 89
tr_hit_id A9SEJ6
Definition tr|A9SEJ6|A9SEJ6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 150
Score (bit) 181.0
E-value 4.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960637|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_P08, 5'
         (593 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SEJ6|A9SEJ6_PHYPA Predicted protein (Fragment) OS=Physcomit...   181   4e-44
tr|A9NVQ7|A9NVQ7_PICSI Putative uncharacterized protein OS=Picea...   176   7e-43
tr|B6TV58|B6TV58_MAIZE Heterogeneous nuclear ribonucleoprotein A...   159   9e-38
tr|Q5ZDX8|Q5ZDX8_ORYSJ Heterogeneous nuclear ribonucleoprotein A...   155   2e-36
tr|A5ADJ5|A5ADJ5_VITVI Putative uncharacterized protein (Chromos...   154   4e-36
tr|A9S9U5|A9S9U5_PHYPA Predicted protein (Fragment) OS=Physcomit...   154   5e-36
tr|Q2V9B8|Q2V9B8_SOLTU RNA-binding protein AKIP1-like OS=Solanum...   153   6e-36
tr|A9NUP9|A9NUP9_PICSI Putative uncharacterized protein OS=Picea...   150   4e-35
tr|A7PL41|A7PL41_VITVI Chromosome chr7 scaffold_20, whole genome...   149   1e-34
tr|A5BLC5|A5BLC5_VITVI Putative uncharacterized protein OS=Vitis...   149   1e-34
tr|A7PG82|A7PG82_VITVI Chromosome chr6 scaffold_15, whole genome...   147   4e-34
tr|A5B1I9|A5B1I9_VITVI Putative uncharacterized protein OS=Vitis...   147   4e-34
tr|A9T9C6|A9T9C6_PHYPA Predicted protein (Fragment) OS=Physcomit...   145   2e-33
tr|Q8LLE6|Q8LLE6_VICFA RNA-binding protein AKIP1 OS=Vicia faba P...   142   1e-32
tr|Q2PEU9|Q2PEU9_TRIPR Putative uncharacterized protein (Fragmen...   142   2e-32
tr|Q2PET5|Q2PET5_TRIPR Putative uncharacterized protein (Fragmen...   142   2e-32
tr|Q2HUH7|Q2HUH7_MEDTR RNA-binding region RNP-1 (RNA recognition...   140   5e-32
tr|Q9LKA4|Q9LKA4_ARATH Putative RNA-binding protein OS=Arabidops...   140   7e-32
tr|A5BZL6|A5BZL6_VITVI Putative uncharacterized protein OS=Vitis...   138   2e-31
tr|A7PG81|A7PG81_VITVI Chromosome chr6 scaffold_15, whole genome...   137   4e-31
tr|Q9LES2|Q9LES2_ARATH Putative uncharacterized protein T8M16_19...   136   1e-30
tr|Q94B29|Q94B29_ARATH Putative uncharacterized protein T8M16_19...   136   1e-30
tr|B6TJJ4|B6TJJ4_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1      134   3e-30
tr|B4FQC3|B4FQC3_MAIZE Putative uncharacterized protein OS=Zea m...   134   3e-30
tr|B4FLV1|B4FLV1_MAIZE Putative uncharacterized protein OS=Zea m...   134   3e-30
tr|A7PVU6|A7PVU6_VITVI Chromosome chr8 scaffold_34, whole genome...   133   7e-30
tr|O80678|O80678_ARATH Putative RNA-binding protein (At2g41060/T...   132   1e-29
tr|B8LRC5|B8LRC5_PICSI Putative uncharacterized protein OS=Picea...   132   2e-29
tr|A9NL61|A9NL61_PICSI Putative uncharacterized protein OS=Picea...   132   2e-29
tr|Q9LJ04|Q9LJ04_ORYSJ cDNA clone:001-203-A05, full insert seque...   124   3e-27

>tr|A9SEJ6|A9SEJ6_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_44234 PE=4 SV=1
          Length = 242

 Score =  181 bits (458), Expect = 4e-44
 Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
 Frame = +2

Query: 149 FTKEQIXXXXXXXXXXXXXXXXKIRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGE 328
           FTKEQ+                +IRKLAD+DP HRK+FVRGLGWD T ++LK +F+Q+GE
Sbjct: 31  FTKEQLMDLLENAALNHADVLHEIRKLADKDPGHRKIFVRGLGWDTTTETLKTVFSQFGE 90

Query: 329 IEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKEPSKKIEGRVTVSQLASVGPSV--PS 502
           +EE +VI DK TGKS+G+GFVT+KHMD A+R+LKEPSK+I+GR+TV QLAS G     P+
Sbjct: 91  VEEGAVIMDKATGKSRGFGFVTFKHMDGAQRSLKEPSKRIDGRMTVCQLASTGALQVNPN 150

Query: 503 NDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
            + S RKIYVGNVP DLSA++LL++FA YG
Sbjct: 151 QEVSQRKIYVGNVPLDLSADRLLALFAGYG 180



 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 34/83 (40%), Positives = 56/83 (67%)
 Frame = +2

Query: 233 DRDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDA 412
           +++ + RK++V  +  D++ D L A+FA YGEIEE  +  DK TG+S+G+  + YK ++A
Sbjct: 150 NQEVSQRKIYVGNVPLDLSADRLLALFAGYGEIEEGPLGFDKFTGRSRGFALIIYKTVEA 209

Query: 413 ARRALKEPSKKIEGRVTVSQLAS 481
           A+RAL EP K ++G     +LA+
Sbjct: 210 AKRALLEPIKTLDGIQMYCKLAA 232


>tr|A9NVQ7|A9NVQ7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 442

 Score =  176 bits (447), Expect = 7e-43
 Identities = 86/150 (57%), Positives = 111/150 (74%), Gaps = 2/150 (1%)
 Frame = +2

Query: 149 FTKEQIXXXXXXXXXXXXXXXXKIRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGE 328
           F KEQ+                 IRKLAD+DPAHRK+FVRGLGW+ T ++LK++F+QYGE
Sbjct: 57  FNKEQLMDIISEHAKKDPQLLESIRKLADKDPAHRKIFVRGLGWETTSEALKSVFSQYGE 116

Query: 329 IEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKEPSKKIEGRVTVSQLASVGPSV--PS 502
           +EEC+VI DK TGKSKGYGFVT+KHM  A++ALK+PSKKI+ R+T  Q+AS GP+   P 
Sbjct: 117 LEECTVITDKGTGKSKGYGFVTFKHMVGAQKALKDPSKKIDSRMTACQMASAGPAPAHPP 176

Query: 503 NDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
            + +GRKIYV NV  D+ AEKLL+ F++YG
Sbjct: 177 VEATGRKIYVSNVSADIPAEKLLNFFSKYG 206



 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
 Frame = +2

Query: 242 PAH-------RKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYK 400
           PAH       RK++V  +  DI  + L   F++YGE+EE  +  DK TG+S+G+    YK
Sbjct: 172 PAHPPVEATGRKIYVSNVSADIPAEKLLNFFSKYGEVEEGPLGFDKHTGRSRGFALFVYK 231

Query: 401 HMDAARRALKEPSKKIEGRVTVSQLASVG 487
           + + A++AL+EP+K +EG     + A+ G
Sbjct: 232 NAEGAKKALEEPNKIVEGHSMNCKRAAEG 260


>tr|B6TV58|B6TV58_MAIZE Heterogeneous nuclear ribonucleoprotein
           A3-like protein 2 OS=Zea mays PE=2 SV=1
          Length = 447

 Score =  159 bits (403), Expect = 9e-38
 Identities = 81/137 (59%), Positives = 103/137 (75%), Gaps = 12/137 (8%)
 Frame = +2

Query: 218 IRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTY 397
           +R  ADRDPA RKLFVRGLGW+ T DSL+AIF+ YG++EE  VI DK TG+SKGYGFVT+
Sbjct: 64  VRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKPTGRSKGYGFVTF 123

Query: 398 KHMDAARRALKEPSKKIEGRVTVSQLASVGPS------------VPSNDQSGRKIYVGNV 541
           +H D+A  ALKEPSKKI+GR+TV+QLA+ G +             P +D S RKI+VGNV
Sbjct: 124 RHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPAGGPAGSGGAPVSDVSLRKIFVGNV 183

Query: 542 PHDLSAEKLLSVFAQYG 592
           P D+++E+LL+ FA YG
Sbjct: 184 PADMASERLLAHFASYG 200



 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 34/83 (40%), Positives = 48/83 (57%)
 Frame = +2

Query: 239 DPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAAR 418
           D + RK+FV  +  D+  + L A FA YGEIEE  +  DKQTGK +G+    YK  + A+
Sbjct: 172 DVSLRKIFVGNVPADMASERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQ 231

Query: 419 RALKEPSKKIEGRVTVSQLASVG 487
            +L +  K I+G   V +LA  G
Sbjct: 232 ASLVDTVKVIDGHQLVCKLALDG 254


>tr|Q5ZDX8|Q5ZDX8_ORYSJ Heterogeneous nuclear ribonucleoprotein
           A2/B1-like (Os01g0614500 protein) OS=Oryza sativa subsp.
           japonica GN=P0410E01.38 PE=4 SV=1
          Length = 447

 Score =  155 bits (392), Expect = 2e-36
 Identities = 79/137 (57%), Positives = 101/137 (73%), Gaps = 12/137 (8%)
 Frame = +2

Query: 218 IRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTY 397
           +R  ADRDPA RKLFVRGLGW+   DSL+AIF+ +G++EE  VI DK TG+SKGYGFVT+
Sbjct: 65  VRAAADRDPALRKLFVRGLGWETNSDSLRAIFSAFGDLEEAVVITDKSTGRSKGYGFVTF 124

Query: 398 KHMDAARRALKEPSKKIEGRVTVSQLASVGPS------------VPSNDQSGRKIYVGNV 541
           +H D+A  ALKEPSKKI+GR+TV+QLA+ G +             P+ D S RKI+VGNV
Sbjct: 125 RHADSAVLALKEPSKKIDGRMTVTQLAAAGAAGGASGGAAGAGGAPAADVSLRKIFVGNV 184

Query: 542 PHDLSAEKLLSVFAQYG 592
           P D+ +E+LL+ FA YG
Sbjct: 185 PADMPSERLLAHFAAYG 201



 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 35/91 (38%), Positives = 50/91 (54%)
 Frame = +2

Query: 239 DPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAAR 418
           D + RK+FV  +  D+  + L A FA YGEIEE  +  DKQTGK +G+    YK  + A+
Sbjct: 173 DVSLRKIFVGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQ 232

Query: 419 RALKEPSKKIEGRVTVSQLASVGPSVPSNDQ 511
            +L +  K I+G   V +LA  G     + Q
Sbjct: 233 ASLVDSVKVIDGHQLVCKLAIEGKKGKQSQQ 263


>tr|A5ADJ5|A5ADJ5_VITVI Putative uncharacterized protein (Chromosome
           chr19 scaffold_4, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00027793001 PE=4 SV=1
          Length = 449

 Score =  154 bits (389), Expect = 4e-36
 Identities = 78/130 (60%), Positives = 98/130 (75%), Gaps = 5/130 (3%)
 Frame = +2

Query: 218 IRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTY 397
           IR +ADRD   RKLF+RGLGWD T + L+ +F+ YGE+EE  VI DK T KSKGYGFVT+
Sbjct: 60  IRSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTF 119

Query: 398 KHMDAARRALKEPSKKIEGRVTVSQLASVGPSVPSN-----DQSGRKIYVGNVPHDLSAE 562
           KH+D A  ALKEPSKKI+GR+TV+QLA+ G S P++     D S RKIYV NVP D+ A+
Sbjct: 120 KHVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVPVDMPAD 179

Query: 563 KLLSVFAQYG 592
           +LL+ F+ YG
Sbjct: 180 RLLAHFSSYG 189



 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 38/83 (45%), Positives = 53/83 (63%)
 Frame = +2

Query: 239 DPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAAR 418
           D + RK++V  +  D+  D L A F+ YGEIEE  +  DKQTGKS+G+    YK  +AA+
Sbjct: 161 DVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQ 220

Query: 419 RALKEPSKKIEGRVTVSQLASVG 487
            AL +P+K I+GR  V +LA  G
Sbjct: 221 AALVDPTKMIDGRQLVCKLAIEG 243


>tr|A9S9U5|A9S9U5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_44443 PE=4 SV=1
          Length = 210

 Score =  154 bits (388), Expect = 5e-36
 Identities = 71/127 (55%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
 Frame = +2

Query: 218 IRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTY 397
           IR +A +DP HRKLFVRGL W+ +  +L+  F QYGE+EE  VI DK TGKS+G+GF+T+
Sbjct: 42  IRDIASKDPVHRKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKGTGKSRGFGFITF 101

Query: 398 KHMDAARRALKEPSKKIEGRVTVSQLASVGPS--VPSNDQSGRKIYVGNVPHDLSAEKLL 571
           KHMD+A RALKEPSK I+GR+TV  LAS G +    S DQ+ RK+Y+G + +D +++ LL
Sbjct: 102 KHMDSAHRALKEPSKNIDGRITVCNLASAGSTSGTSSTDQAQRKLYIGGLSYDTTSDTLL 161

Query: 572 SVFAQYG 592
           ++F+QYG
Sbjct: 162 NIFSQYG 168



 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 36/71 (50%), Positives = 53/71 (74%)
 Frame = +2

Query: 239 DPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAAR 418
           D A RKL++ GL +D T D+L  IF+QYGEIEE ++  DK T KS+G+ FVT+K ++ A+
Sbjct: 140 DQAQRKLYIGGLSYDTTSDTLLNIFSQYGEIEEGAIAYDKNTNKSRGFAFVTFKSIEGAK 199

Query: 419 RALKEPSKKIE 451
           RA+++ +K IE
Sbjct: 200 RAIEDSNKSIE 210


>tr|Q2V9B8|Q2V9B8_SOLTU RNA-binding protein AKIP1-like OS=Solanum
           tuberosum PE=2 SV=1
          Length = 498

 Score =  153 bits (387), Expect = 6e-36
 Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 9/157 (5%)
 Frame = +2

Query: 149 FTKEQIXXXXXXXXXXXXXXXXKIRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGE 328
           FTK+Q+                 I+KLAD+DPAHRK+FV GLGWD T ++L ++FA YGE
Sbjct: 125 FTKDQLTALIKEALAKYPDFKENIQKLADKDPAHRKIFVHGLGWDTTAETLTSVFATYGE 184

Query: 329 IEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKEPSKKIEGRVTVSQLASVGP------ 490
           IE+C  + DK +GKSKGYGF+ +KH   AR+ALKEP KKI  R+T  QLAS GP      
Sbjct: 185 IEDCKAVTDKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPVPAPPP 244

Query: 491 ---SVPSNDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
              + P ++ + RKI+V NV  DL  +KLL  F+++G
Sbjct: 245 TTATPPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFG 281



 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 34/85 (40%), Positives = 48/85 (56%)
 Frame = +2

Query: 251 RKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAARRALK 430
           RK+FV  +  D+    L   F+++GE+EE  +  DKQ+GK KG+    YK ++ AR+AL+
Sbjct: 257 RKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLFVYKTVEGARKALE 316

Query: 431 EPSKKIEGRVTVSQLASVGPSVPSN 505
           EP K  EG     Q A  GP    N
Sbjct: 317 EPHKTFEGHTLHCQKAIDGPKHSKN 341


>tr|A9NUP9|A9NUP9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 365

 Score =  150 bits (380), Expect = 4e-35
 Identities = 77/149 (51%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
 Frame = +2

Query: 152 TKEQIXXXXXXXXXXXXXXXXKIRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGEI 331
           +KEQ+                +I+ +A +DPAHRKLFVRGL W+ +  +L   F QYGEI
Sbjct: 36  SKEQLISLLVDAGSSYPAIAEEIKDVASKDPAHRKLFVRGLAWETSSQTLCDAFEQYGEI 95

Query: 332 EECSVIKDKQTGKSKGYGFVTYKHMDAARRALKEPSKKIEGRVTVSQL--ASVGPSVPSN 505
           EE +VI DK +GKS+G+GFVT+KHMD+A++ALKEPSK I+GR+TVS L  AS GP   S 
Sbjct: 96  EEGAVIMDKASGKSRGFGFVTFKHMDSAQKALKEPSKTIDGRITVSNLAVASTGPG-QSA 154

Query: 506 DQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
           DQ+ RK+Y+G + +D + +KLL VF++YG
Sbjct: 155 DQAQRKLYIGGLSYDTANDKLLEVFSKYG 183



 Score = 90.1 bits (222), Expect = 8e-17
 Identities = 43/83 (51%), Positives = 59/83 (71%)
 Frame = +2

Query: 239 DPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAAR 418
           D A RKL++ GL +D   D L  +F++YGEIEE SV  DK T KS+G+ FVT+K ++A +
Sbjct: 155 DQAQRKLYIGGLSYDTANDKLLEVFSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEATK 214

Query: 419 RALKEPSKKIEGRVTVSQLASVG 487
           RALKEP+K I+GR    +LA+ G
Sbjct: 215 RALKEPNKTIDGRTVTVKLAADG 237


>tr|A7PL41|A7PL41_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019425001
           PE=4 SV=1
          Length = 458

 Score =  149 bits (376), Expect = 1e-34
 Identities = 75/150 (50%), Positives = 100/150 (66%), Gaps = 2/150 (1%)
 Frame = +2

Query: 149 FTKEQIXXXXXXXXXXXXXXXXKIRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGE 328
           ++K+Q+                +IR+ ADRD +HRK+FV GLGWD T ++L A F  YG+
Sbjct: 58  YSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQ 117

Query: 329 IEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKEPSKKIEGRVTVSQLASVGPSVP--S 502
           IE+C+V+ D+ TGK+KGYGFV +K    A +ALK+P KKI  R+T SQLAS+GPS P  S
Sbjct: 118 IEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQS 177

Query: 503 NDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
            D  GRKIYV NV  D+  E+L S FA++G
Sbjct: 178 QDTVGRKIYVSNVQADVDPERLRSFFAKFG 207



 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKGYGFVTYKHMDAA 415
           +D   RK++V  +  D+  + L++ FA++GEIE   +  D QTGKS+G+    YK+ ++A
Sbjct: 178 QDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESA 237

Query: 416 RRALKEPSKKIEGRVTVSQLASVGPS-VPSNDQ 511
           R+AL++P +  EG     Q A+ G + VP+  Q
Sbjct: 238 RKALEDPYRIFEGHQLHCQKATEGKNKVPAQPQ 270


>tr|A5BLC5|A5BLC5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_028295 PE=4 SV=1
          Length = 443

 Score =  149 bits (376), Expect = 1e-34
 Identities = 75/150 (50%), Positives = 100/150 (66%), Gaps = 2/150 (1%)
 Frame = +2

Query: 149 FTKEQIXXXXXXXXXXXXXXXXKIRKLADRDPAHRKLFVRGLGWDITVDSLKAIFAQYGE 328
           ++K+Q+                +IR+ ADRD +HRK+FV GLGWD T ++L A F  YG+
Sbjct: 58  YSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQ 117

Query: 329 IEECSVIKDKQTGKSKGYGFVTYKHMDAARRALKEPSKKIEGRVTVSQLASVGPSVP--S 502
           IE+C+V+ D+ TGK+KGYGFV +K    A +ALK+P KKI  R+T SQLAS+GPS P  S
Sbjct: 118 IEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQS 177

Query: 503 NDQSGRKIYVGNVPHDLSAEKLLSVFAQYG 592
            D  GRKIYV NV  D+  E+L S FA++G
Sbjct: 178 QDTVGRKIYVSNVQADVDPERLRSFFAKFG 207



 Score = 41.2 bits (95), Expect = 0.045
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +2

Query: 236 RDPAHRKLFVRGLGWDITVDSLKAIFAQYGEIEECSVIKDKQTGKSKG 379
           +D   RK++V  +  D+  + L++ FA++GEIE   +  D QTGKS+G
Sbjct: 178 QDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRG 225