DK960641 |
Clone id |
TST39A01NGRL0007_P12 |
Library |
TST39 |
Length |
636 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_P12. 5' end sequence. |
Accession |
DK960641 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3536Contig1 |
Sequence |
GGAGAGTTAAGAGAGGAAGAGACGACGATTTCTCTGCCTTCGGGGCAGCAATCACTGTTT CTCATTGCACATATTTTGTTATGCTGTGTTGACCCGATCTATCTGTACATACACAGAAGG AGAGCAGCGATAGAGTGAACGACAACGAGAAGTAGGGCAATTAACGATGATTCCCACCAG GCAGTCCCCAAAGCCCATGAACTCCATTAACTCCCTCCCCCCTTACCTTCAGACTTTCTC CCCCAGCGCTGGCCACTCCCCTCACCATCGCTCCTCTTCTTCAAGTGCCTCCGAGCTGGA CAAATATCTCTCCGAACTATTAACTGAACGTCAAAAGTTGGGTCCTTTCATGCAAGTGCT ACCCAATTGCAGCAGGCTTTTAAACCAAGAGATCATGAGATTAACAAGTCTAGTGGGGAC AACTTCATACGGTGAACATGATTCTATAGAGCATGGCAGCCTCCTTTCATCTGGGGGTAT GATGTCAAATGGAGTGGGACTCGATTCAAATGGCTGGTCTTCCTTCCAATCAGAGAGGCT GGTGTCTGCCATGTCATGGCGTGGTTTACCTGGAGGTTCCCCAGGTCCTGTTATTAAAAA GATCATACGAATTGAAGTACCTGTAGACAAGTACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZVI3 |
Definition |
sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana |
Align length |
117 |
Score (bit) |
92.4 |
E-value |
2.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLA9 |
Definition |
tr|B8LLA9|B8LLA9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
115 |
Score (bit) |
121.0 |
E-value |
4.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960641|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_P12, 5' (636 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLA9|B8LLA9_PICSI Putative uncharacterized protein OS=Picea... 121 4e-26 tr|A9TGK8|A9TGK8_PHYPA Predicted protein OS=Physcomitrella paten... 114 5e-24 tr|A9SDR7|A9SDR7_PHYPA Predicted protein OS=Physcomitrella paten... 114 6e-24 tr|A9NYT0|A9NYT0_PICSI Putative uncharacterized protein OS=Picea... 111 3e-23 tr|A9TN02|A9TN02_PHYPA Predicted protein OS=Physcomitrella paten... 110 9e-23 tr|Q5N8G9|Q5N8G9_ORYSJ cDNA clone:J013001M07, full insert sequen... 105 3e-21 tr|A3B446|A3B446_ORYSJ Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|A2WXQ7|A2WXQ7_ORYSI Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|Q60DW1|Q60DW1_ORYSJ Os05g0419500 protein OS=Oryza sativa subs... 104 4e-21 tr|B8AYB7|B8AYB7_ORYSI Putative uncharacterized protein OS=Oryza... 104 4e-21 tr|B4FCM9|B4FCM9_MAIZE Putative uncharacterized protein OS=Zea m... 101 4e-20 tr|A5BT30|A5BT30_VITVI Putative uncharacterized protein OS=Vitis... 100 1e-19 tr|B4FZJ8|B4FZJ8_MAIZE Putative uncharacterized protein OS=Zea m... 99 2e-19 tr|A7Q9W1|A7Q9W1_VITVI Chromosome chr8 scaffold_68, whole genome... 96 2e-18 tr|Q0DY06|Q0DY06_ORYSJ Os02g0722700 protein OS=Oryza sativa subs... 94 9e-18 tr|B7FAH5|B7FAH5_ORYSJ cDNA, clone: J100073F21, full insert sequ... 94 9e-18 tr|A2X931|A2X931_ORYSI Putative uncharacterized protein OS=Oryza... 94 9e-18 tr|A9PGS1|A9PGS1_POPTR Putative uncharacterized protein OS=Popul... 93 2e-17 tr|Q6Z5M7|Q6Z5M7_ORYSJ Putative KH domain protein OS=Oryza sativ... 92 3e-17 tr|A3AAV2|A3AAV2_ORYSJ Putative uncharacterized protein OS=Oryza... 92 3e-17 tr|B4F808|B4F808_MAIZE Putative uncharacterized protein OS=Zea m... 91 8e-17 tr|A7NXY9|A7NXY9_VITVI Chromosome chr6 scaffold_3, whole genome ... 90 1e-16 tr|Q75GR5|Q75GR5_ORYSJ Os03g0815700 protein OS=Oryza sativa subs... 89 2e-16 tr|B8AM97|B8AM97_ORYSI Putative uncharacterized protein OS=Oryza... 89 2e-16 tr|B6TF49|B6TF49_MAIZE Nucleic acid binding protein OS=Zea mays ... 89 2e-16 tr|B4FU04|B4FU04_MAIZE Putative uncharacterized protein OS=Zea m... 89 2e-16 tr|B4FN92|B4FN92_MAIZE Nucleic acid binding protein OS=Zea mays ... 89 3e-16 tr|A5BIR0|A5BIR0_VITVI Putative uncharacterized protein OS=Vitis... 88 4e-16 tr|B4FNZ8|B4FNZ8_MAIZE Putative uncharacterized protein OS=Zea m... 88 5e-16 tr|Q8H2M0|Q8H2M0_ORYSJ Os07g0227400 protein OS=Oryza sativa subs... 87 6e-16
>tr|B8LLA9|B8LLA9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 289
Score = 121 bits (303), Expect = 4e-26 Identities = 58/115 (50%), Positives = 72/115 (62%), Gaps = 4/115 (3%) Frame = +2
Query: 302 KYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXXXXX 481 +YL+ELL ERQKL PFMQVLPNCSRLLNQEI+R T +V +G+HD +EH Sbjct: 38 RYLAELLAERQKLSPFMQVLPNCSRLLNQEIIRTTGMVSNQGFGDHDRLEHSGPLASAGL 97
Query: 482 XXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D GW QSERL S+M W G PG PV+KK++R+++PVD Y Sbjct: 98 ISNGSGMDLGGWGGLQSERLGISQASSMGWHGAPGVPISPVVKKLMRLDIPVDNY 152
>tr|A9TGK8|A9TGK8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222121 PE=4 SV=1 Length = 276
Score = 114 bits (285), Expect = 5e-24 Identities = 60/113 (53%), Positives = 71/113 (62%), Gaps = 1/113 (0%) Frame = +2
Query: 299 DKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXXXX 478 DKYLSELL ERQ L PFMQVLPNCSRLLNQEIMR+T+LVG Y + D ++H Sbjct: 30 DKYLSELLAERQNLCPFMQVLPNCSRLLNQEIMRVTTLVGKLPYLDQDGLDHRSPLPVGT 89
Query: 479 XXXXXXXXDSNGWSSFQSERLV-SAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D NGW ERLV + W G PG S G ++KK RI++P+DKY Sbjct: 90 PLNDGGSGDLNGW----GERLVIPQVGWHGTPGASAGLILKKTQRIDIPIDKY 138
>tr|A9SDR7|A9SDR7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_183867 PE=4 SV=1 Length = 278
Score = 114 bits (284), Expect = 6e-24 Identities = 62/117 (52%), Positives = 75/117 (64%), Gaps = 3/117 (2%) Frame = +2
Query: 293 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIE--HXXXX 466 E DKYLSELL ERQ LGPFMQVLPNCSRLLNQEI+R+T+LVG +S+ + D +E H Sbjct: 28 EHDKYLSELLAERQNLGPFMQVLPNCSRLLNQEIVRVTALVGNSSFLDQDGLEHGHGSPL 87
Query: 467 XXXXXXXXXXXXDSNGWSSFQSERL-VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D NGW +RL + SW G PG GP++K+ RI+VPVDKY Sbjct: 88 SSGILLNNGGSGDLNGW----GDRLGLPQSSWHGTPGTLAGPIVKRTQRIDVPVDKY 140
>tr|A9NYT0|A9NYT0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 294
Score = 111 bits (278), Expect = 3e-23 Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 5/116 (4%) Frame = +2
Query: 302 KYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEH-XXXXXXXX 478 +YL+ELL ERQKLGPFMQVLP CSRLLNQEI+RL++LV + +HD ++H Sbjct: 42 RYLTELLAERQKLGPFMQVLPICSRLLNQEIVRLSTLVSNQGFVDHDRLDHGSPMASAGL 101
Query: 479 XXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D GWS Q+ER+ ++M W G P GS PVIK ++R++VP DK+ Sbjct: 102 LSNGGTMMDLGGWSGLQTERMSISQATSMGWHGAPAGSINPVIKTVLRMDVPADKF 157
>tr|A9TN02|A9TN02_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108452 PE=4 SV=1 Length = 278
Score = 110 bits (274), Expect = 9e-23 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 1/112 (0%) Frame = +2
Query: 302 KYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXXXXX 481 KYLSELL ERQ LGPFMQVLPNCSRLL+QEI+R+T+LVG +S+ + D ++H Sbjct: 33 KYLSELLAERQNLGPFMQVLPNCSRLLSQEIVRVTALVGNSSFLDQDGVDHGSPLSLGTR 92
Query: 482 XXXXXXXDSNGWSSFQSERL-VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D NGW +RL +S W G P GP++K+ RI+VPVDK+ Sbjct: 93 INNGGSGDLNGW----GDRLGLSQSGWHGTPATPAGPIVKRTQRIDVPVDKF 140
>tr|Q5N8G9|Q5N8G9_ORYSJ cDNA clone:J013001M07, full insert sequence OS=Oryza sativa subsp. japonica GN=P0408G07.28-1 PE=2 SV=1 Length = 290
Score = 105 bits (261), Expect = 3e-21 Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 4/118 (3%) Frame = +2
Query: 293 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 472 E ++YL+ELL ERQKL PF+QVLP C+RLLNQEI+R +SL ++ + + IEH Sbjct: 34 ERERYLAELLAERQKLAPFVQVLPFCTRLLNQEILRASSLPPNHNFVDPERIEHGSPLRL 93
Query: 473 XXXXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D GWS Q+E + S+M W G P + PV+KK++R++VPVDKY Sbjct: 94 PGLPVNGQPMDLEGWSGMQTENMRVLQASSMGWNGPPAITGTPVVKKVVRLDVPVDKY 151
>tr|A3B446|A3B446_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017818 PE=4 SV=1 Length = 296
Score = 105 bits (261), Expect = 3e-21 Identities = 53/118 (44%), Positives = 72/118 (61%), Gaps = 4/118 (3%) Frame = +2
Query: 293 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 472 E ++YL+ELL ERQKL PFMQVLP C+RLLNQEI+R +SL ++ E + + H Sbjct: 34 ERERYLAELLAERQKLAPFMQVLPFCNRLLNQEILRASSLPPNPNFVEPERVNHGSPLRL 93
Query: 473 XXXXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D GWS Q+E++ +M W PG + PV+KK++RI+VPVDKY Sbjct: 94 TGHPMNGQPMDLEGWSGMQTEQMGVLQSPSMGWNVAPGVAGSPVVKKVVRIDVPVDKY 151
>tr|A2WXQ7|A2WXQ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04709 PE=4 SV=1 Length = 290
Score = 105 bits (261), Expect = 3e-21 Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 4/118 (3%) Frame = +2
Query: 293 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 472 E ++YL+ELL ERQKL PF+QVLP C+RLLNQEI+R +SL ++ + + IEH Sbjct: 34 ERERYLAELLAERQKLAPFVQVLPFCTRLLNQEILRASSLPPNHNFVDPERIEHGSPLRL 93
Query: 473 XXXXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D GWS Q+E + S+M W G P + PV+KK++R++VPVDKY Sbjct: 94 PGLPVNGQPMDLEGWSGMQTENMRVLQASSMGWNGPPAITGTPVVKKVVRLDVPVDKY 151
>tr|Q60DW1|Q60DW1_ORYSJ Os05g0419500 protein OS=Oryza sativa subsp. japonica GN=P0426G01.11 PE=2 SV=1 Length = 291
Score = 104 bits (260), Expect = 4e-21 Identities = 54/117 (46%), Positives = 71/117 (60%), Gaps = 3/117 (2%) Frame = +2
Query: 293 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 472 E ++YL+ELL ERQKL PFMQVLP C+RLLNQEI+R +SL ++ E + + H Sbjct: 34 ERERYLAELLAERQKLAPFMQVLPFCNRLLNQEILRASSLPPNPNFVEPERVNHGSPLRL 93
Query: 473 XXXXXXXXXXDSNGWSSFQSERLV---SAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D GWS Q+E V +M W PG + PV+KK++RI+VPVDKY Sbjct: 94 TGHPMNGQPMDLEGWSGMQTEMGVLQSPSMGWNVAPGVAGSPVVKKVVRIDVPVDKY 150
>tr|B8AYB7|B8AYB7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19999 PE=4 SV=1 Length = 291
Score = 104 bits (260), Expect = 4e-21 Identities = 54/117 (46%), Positives = 71/117 (60%), Gaps = 3/117 (2%) Frame = +2
Query: 293 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 472 E ++YL+ELL ERQKL PFMQVLP C+RLLNQEI+R +SL ++ E + + H Sbjct: 34 ERERYLAELLAERQKLAPFMQVLPFCNRLLNQEILRASSLPPNPNFVEPERVNHGSPLRL 93
Query: 473 XXXXXXXXXXDSNGWSSFQSERLV---SAMSWRGLPGGSPGPVIKKIIRIEVPVDKY 634 D GWS Q+E V +M W PG + PV+KK++RI+VPVDKY Sbjct: 94 TGHPMNGQPMDLEGWSGMQTEMGVLQSPSMGWNVAPGVAGSPVVKKVVRIDVPVDKY 150
|