DK960647 |
Clone id |
TST39A01NGRL0007_P18 |
Library |
TST39 |
Length |
620 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_P18. 5' end sequence. |
Accession |
DK960647 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL112Contig1 |
Sequence |
TGGACGTGAAGAGGGGAAGATGGCGGGTCTAAGAATTTCCCTCTCTCCGGCAGCCCCGCT TGTGGGTCGCCCAGACGGTCATGGGTCTGCCCAGTCTGCAAGGTTTCTGGGTTGCAGAGA GCTCCATTTTTTCTGGCCAGGCCAAAAAGGCAGCAGACACATCCATCACCACAACAAAAT AGTATGTGCATTGGGTGGTTCTTCTGATGAAGGATATACAGCTGTATTCCCGAGAATCTA TGTGCGAGATCCACACAAAGTTTTAGGGGTTACTCGGGATGCATCCGAGGTAGAGATTCA ATCAGCTCGCAACTTTCTTGCTGAACAATATGCACATCATGAACGAAGTAGGGAAGCTGT TGAGGCAGCTCATGACAAAATCATCATGGAAAGCTTCCGAGCAAGGAAAAAATCAAAAAT CAATCTTAAGAGCAACCTTAAAAAGAAAGTTGAAGAATCACCTCCGTGGGTGAAAAGAAT TCTGAATATTTTTGAAGTTCCACCTTCTCAAATTATACTACAGAGGGCGGCCTTTTTTTG GACTTATGGGAGTGTGGAGTGATGAATCCAGCCGAGGGGGGCCCCGCATTTCAGGTGGCT GTTTCTCTAGCAGGATGTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84BU3 |
Definition |
sp|Q84BU3|DNAJ_LACAC Chaperone protein dnaJ OS=Lactobacillus acidophilus |
Align length |
55 |
Score (bit) |
35.8 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SI00 |
Definition |
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
121 |
Score (bit) |
119.0 |
E-value |
2.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960647|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_P18, 5' (607 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 119 2e-31 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 117 4e-31 tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 117 4e-31 tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 123 9e-27 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 114 3e-26 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 114 3e-26 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 112 1e-25 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 105 2e-25 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 108 1e-24 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 108 5e-24 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 110 6e-23 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 100 7e-20 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 92 9e-18 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 92 9e-18 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 87 4e-16 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 86 8e-16 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 85 1e-15 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 5e-14 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 67 6e-10 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 64 7e-10 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 62 9e-10 tr|Q8YS32|Q8YS32_ANASP All3259 protein OS=Anabaena sp. (strain P... 53 1e-05 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 53 1e-05 tr|Q10Z68|Q10Z68_TRIEI Putative uncharacterized protein OS=Trich... 51 5e-05 tr|A0ZMC6|A0ZMC6_NODSP Putative uncharacterized protein OS=Nodul... 51 6e-05 tr|A0YNA1|A0YNA1_9CYAN Putative uncharacterized protein OS=Lyngb... 51 6e-05 tr|B2J7N5|B2J7N5_NOSP7 Putative uncharacterized protein OS=Nosto... 50 8e-05 tr|B1WS19|B1WS19_CYAA5 Putative uncharacterized protein OS=Cyano... 50 1e-04 tr|B7K9K5|B7K9K5_9CHRO Heat shock protein DnaJ domain protein OS... 50 1e-04 tr|A3IQY5|A3IQY5_9CHRO Putative uncharacterized protein OS=Cyano... 49 2e-04
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 119 bits (297), Expect(2) = 2e-31 Identities = 62/121 (51%), Positives = 78/121 (64%) Frame = +1
Query: 175 ALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEA 354 A G S VFPR+ V+DP K LGV++DASE E++ ARN+L EQY HE+SREA+E+ Sbjct: 4 AFGSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIES 63
Query: 355 AHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFWTY 534 A+D IIM+SFR R VEESPPWV+ I+N+ EVP I+ QRAA F Sbjct: 64 AYDTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLL 123
Query: 535 G 537 G Sbjct: 124 G 124
Score = 41.2 bits (95), Expect(2) = 2e-31 Identities = 20/29 (68%), Positives = 21/29 (72%) Frame = +3
Query: 519 LFLDLWECGVMNPAEGGPAFQVAVSLAGC 605 LFL L V NPA GGPAFQVA+SLA C Sbjct: 119 LFLLLGVWSVFNPANGGPAFQVAISLAAC 147
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 117 bits (292), Expect(2) = 4e-31 Identities = 63/118 (53%), Positives = 76/118 (64%) Frame = +1
Query: 184 GSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHD 363 G ++ VFPR VRDP K+LGV+ DASE EI+ A+N+L EQY HE SREA+EAA++ Sbjct: 55 GGAENLKPPVFPRRNVRDPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYE 114
Query: 364 KIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFWTYG 537 KIIM SFR R VEESPPWV+ ILN+ EVP I QRAA F+ G Sbjct: 115 KIIMHSFRVRKASKINLKTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLG 172
Score = 42.0 bits (97), Expect(2) = 4e-31 Identities = 21/29 (72%), Positives = 21/29 (72%) Frame = +3
Query: 519 LFLDLWECGVMNPAEGGPAFQVAVSLAGC 605 LF L V NPAEGGPAFQVAVSLA C Sbjct: 167 LFFLLGVWSVFNPAEGGPAFQVAVSLAAC 195
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 117 bits (292), Expect(2) = 4e-31 Identities = 61/109 (55%), Positives = 74/109 (67%) Frame = +1
Query: 211 VFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRA 390 VFPR VRDP K+LG++ DASE EI+ A+N+L EQY HE SREA+EAA++KIIM S+R Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 391 RXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFWTYG 537 R VEESPPWV+ ILN+ EVP II QRAA F+ G Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLG 113
Score = 42.0 bits (97), Expect(2) = 4e-31 Identities = 21/29 (72%), Positives = 21/29 (72%) Frame = +3
Query: 519 LFLDLWECGVMNPAEGGPAFQVAVSLAGC 605 LF L V NPAEGGPAFQVAVSLA C Sbjct: 108 LFFLLGVWSVFNPAEGGPAFQVAVSLAAC 136
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 123 bits (308), Expect = 9e-27 Identities = 67/139 (48%), Positives = 86/139 (61%), Gaps = 2/139 (1%) Frame = +1
Query: 172 CALGGS--SDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREA 345 CA+ S G+ VFPR+ V DP+K LGV++ ASE EIQ ARNFL EQYA HERS E+ Sbjct: 66 CAMDASFGGRVGHPPVFPRVNVWDPYKRLGVSKYASEEEIQEARNFLIEQYAGHERSVES 125
Query: 346 VEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 525 +EAA +KIIM+SFR R V+ESPPWV+ ++N EVPPS++I++RA F Sbjct: 126 IEAAFEKIIMKSFRERKRSKINLKSKLKKKVDESPPWVRSLINFLEVPPSEVIIRRACLF 185
Query: 526 WTYGSVE**IQPRGAPHFR 582 G G P F+ Sbjct: 186 AVIGVWSVMNSSEGGPAFQ 204
Score = 36.6 bits (83), Expect = 1.2 Identities = 18/29 (62%), Positives = 20/29 (68%) Frame = +3
Query: 519 LFLDLWECGVMNPAEGGPAFQVAVSLAGC 605 LF + VMN +EGGPAFQVAVSL C Sbjct: 184 LFAVIGVWSVMNSSEGGPAFQVAVSLVTC 212
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 114 bits (286), Expect(2) = 3e-26 Identities = 60/119 (50%), Positives = 76/119 (63%), Gaps = 4/119 (3%) Frame = +1
Query: 181 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAV 348 G D G++ VFPR +RDP+K+LGV RDA+E EI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 349 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 525 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFF 175
Score = 28.1 bits (61), Expect(2) = 3e-26 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3
Query: 546 VMNPAEGGPAFQVAVSLAGC 605 + AE GPAFQ+A+SL C Sbjct: 183 IATSAENGPAFQLAISLFSC 202
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 114 bits (286), Expect(2) = 3e-26 Identities = 60/119 (50%), Positives = 76/119 (63%), Gaps = 4/119 (3%) Frame = +1
Query: 181 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAV 348 G D G++ VFPR +RDP+K+LGV RDA+E EI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 349 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 525 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFF 175
Score = 28.1 bits (61), Expect(2) = 3e-26 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3
Query: 546 VMNPAEGGPAFQVAVSLAGC 605 + AE GPAFQ+A+SL C Sbjct: 183 IATSAENGPAFQLAISLFSC 202
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 112 bits (280), Expect(2) = 1e-25 Identities = 57/108 (52%), Positives = 71/108 (65%) Frame = +1
Query: 202 YTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHDKIIMES 381 + VFPR +RDP+K+LGV RDASE EI+ ARNFL +QYA HE S EA+E A++KIIM+S Sbjct: 69 HVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKIIMKS 128
Query: 382 FRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 525 ++ R VEESP WVK +L FEVP II +R FF Sbjct: 129 YQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFF 176
Score = 28.1 bits (61), Expect(2) = 1e-25 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3
Query: 546 VMNPAEGGPAFQVAVSLAGC 605 + AE GPAFQ+A+SL C Sbjct: 184 IATSAENGPAFQLAISLFSC 203
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 105 bits (261), Expect(2) = 2e-25 Identities = 53/104 (50%), Positives = 70/104 (67%) Frame = +1
Query: 214 FPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRAR 393 F R+ V DP+K LG++RDASE E+ S+RNFL QYA+HERS E++EAA +KI+M+SF R Sbjct: 54 FSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEAAFEKILMKSFINR 113
Query: 394 XXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 525 VEESPPWV+ +L+ E+PP IIL+R F Sbjct: 114 KKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLF 157
Score = 34.7 bits (78), Expect(2) = 2e-25 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = +3
Query: 522 FLDLWECGVMNPAEGGPAFQVAVSLAGC 605 F+ W VMN AE GPAFQVA+S C Sbjct: 159 FMACWS--VMNSAEAGPAFQVAISFGAC 184
>tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea mays PE=2 SV=1 Length = 262
Score = 108 bits (269), Expect(2) = 1e-24 Identities = 57/114 (50%), Positives = 72/114 (63%) Frame = +1
Query: 184 GSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHD 363 GS D +T VFPR DP+K+LGV +DASE E++SARNFL +QYA +E S EA+E A+D Sbjct: 55 GSYDSEHTPVFPRQQSWDPYKLLGVDQDASEEEVRSARNFLLKQYAGYEESEEAIEGAYD 114
Query: 364 KIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 525 KIIM S+ R VE SP W+K + FEVP +II +R AFF Sbjct: 115 KIIMNSYTDRKKSKFNLKSKLKEQVEGSPSWLKALFGYFEVPSLEIISRRFAFF 168
Score = 28.9 bits (63), Expect(2) = 1e-24 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +3
Query: 546 VMNPAEGGPAFQVAVSLAGC 605 + AE GPAFQ+A+SLA C Sbjct: 176 IATSAETGPAFQLAMSLASC 195
>tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026228 PE=4 SV=1 Length = 264
Score = 108 bits (269), Expect(2) = 5e-24 Identities = 57/115 (49%), Positives = 73/115 (63%) Frame = +1
Query: 181 GGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAH 360 GG DE + +FPR DP+K+LGV DASE EI+SARNFL +QYA HE + EA+E A+ Sbjct: 56 GGYGDE-HAPLFPRQQAWDPYKILGVDHDASEEEIRSARNFLLKQYAGHEETEEAIEGAY 114
Query: 361 DKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 525 +KIIM+S+ R VEESP W K +L FEVP ++II +R A F Sbjct: 115 EKIIMKSYSHRKKSKINLKSKIQKQVEESPSWFKAMLGFFEVPSAEIISRRLALF 169
Score = 26.9 bits (58), Expect(2) = 5e-24 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3
Query: 519 LFLDLWECGVMNPAEGGPAFQVAVSLAGC 605 LF + ++ AE GP FQ+A+SL C Sbjct: 168 LFAFIAGWSIVTSAETGPTFQLALSLVSC 196
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