| DK960648 |
| Clone id |
TST39A01NGRL0007_P19 |
| Library |
TST39 |
| Length |
647 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_P19. 5' end sequence. |
| Accession |
DK960648 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
TACAGACACACAAACACGCACGCTCCCACAACGCGCGCGCGGGCACGGAGAGAGAGAGAG AGAGAGAGAGAGGAAGAGAGAGAGGAGTTTTCTCTTGGCAGGACAACCTGCGCATGTTTT TATACGCAGAACCTTCCTGAGGAGCCAGAGGCATGAGAGTTATGCTGGACAGCCATGTGC TGCCTCACCATAGCCTCTCAGCTCTCCCCTGGGACCCCCTTCGATTCCGAAGGGCACCCA TTACTCTTCTATCCAGATGGAAGTCTCACTCGGACATGCCAGGGCCCTCCGCCATTTGCA ACAGGTCCACGCTTCTGTGTGTGAAAGCTCTTGGTAGTAACGACCGAGATGGGCGGAATG GCAGTAATGGAGTGGATGGCTGGGATCCTGCCTTCGAGATTGAAGTTCCTGCAGATCAGC GACCGGCAAATGAGCTGGCTGCTTTGAAGGAAGAAGCTTTGTACTCTTGGGCCCAGCTAA GCTGGATAGACTTTGGTGTCCGCCTGGGAAGCCTTTGGCTTTTGTTCTTTGTGTTCCTGG GTGCACCAATCGCCAGCGCCAGCTTTGAGCCCTCTCGAGAACCTTTGAGATTTGCCCTTG CTGGAGGAGCTGGGTCATTGTTTGCTGTTGCCATTATTGTTTTAAGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q30WJ0 |
| Definition |
sp|Q30WJ0|IF2_DESDG Translation initiation factor IF-2 OS=Desulfovibrio desulfuricans (strain G20) |
| Align length |
83 |
| Score (bit) |
34.3 |
| E-value |
0.58 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9RYR8 |
| Definition |
tr|A9RYR8|A9RYR8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
104 |
| Score (bit) |
104.0 |
| E-value |
4.0e-21 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960648|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0007_P19, 5' (647 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RYR8|A9RYR8_PHYPA Predicted protein OS=Physcomitrella paten... 104 4e-21 tr|Q10J01|Q10J01_ORYSJ Os03g0439700 protein OS=Oryza sativa subs... 87 7e-16 tr|A5BUA8|A5BUA8_VITVI Putative uncharacterized protein (Chromos... 87 1e-15 tr|Q9FN15|Q9FN15_ARATH Gb|AAC18972.1 (Putative uncharacterized p... 86 1e-15 tr|B7FKL7|B7FKL7_MEDTR Putative uncharacterized protein OS=Medic... 85 4e-15 tr|Q75KB9|Q75KB9_ORYSJ Expressed protein (Putative uncharacteriz... 84 7e-15 tr|A2XIE1|A2XIE1_ORYSI Putative uncharacterized protein OS=Oryza... 83 1e-14 tr|B6U8L9|B6U8L9_MAIZE Putative uncharacterized protein OS=Zea m... 73 2e-11 tr|A8J8C0|A8J8C0_CHLRE Predicted protein OS=Chlamydomonas reinha... 65 5e-09 tr|Q00SM7|Q00SM7_OSTTA Homology to unknown gene OS=Ostreococcus ... 48 6e-04 tr|A9NYZ6|A9NYZ6_PICSI Putative uncharacterized protein OS=Picea... 46 0.002 tr|Q55866|Q55866_SYNY3 Ycf36 protein OS=Synechocystis sp. (strai... 45 0.005 tr|B5W4S1|B5W4S1_SPIMA Putative uncharacterized protein OS=Arthr... 43 0.014 tr|A7P4M9|A7P4M9_VITVI Chromosome chr4 scaffold_6, whole genome ... 41 0.071 tr|A9TRT6|A9TRT6_PHYPA Predicted protein (Fragment) OS=Physcomit... 39 0.35 tr|B4VPY8|B4VPY8_9CYAN Putative uncharacterized protein OS=Micro... 38 0.46 tr|A0YYX0|A0YYX0_9CYAN Putative uncharacterized protein OS=Lyngb... 38 0.46 tr|Q8YPM3|Q8YPM3_ANASP Alr4170 protein OS=Anabaena sp. (strain P... 38 0.60 tr|Q3MF78|Q3MF78_ANAVT Putative uncharacterized protein OS=Anaba... 38 0.60 tr|A1CZ16|A1CZ16_NEOFI C6 finger domain protein, putative OS=Neo... 37 1.0 tr|A3IPE7|A3IPE7_9CHRO Putative uncharacterized protein OS=Cyano... 37 1.3 tr|B4WR96|B4WR96_9SYNE Putative uncharacterized protein OS=Synec... 36 1.8 tr|B8HKM1|B8HKM1_9CHRO Putative uncharacterized protein OS=Cyano... 36 2.3 tr|B8BSA7|B8BSA7_THAPS Predicted protein (Fragment) OS=Thalassio... 36 2.3 tr|B0JP66|B0JP66_MICAN Putative uncharacterized protein ycf36 OS... 35 3.0 tr|Q4C615|Q4C615_CROWT Putative uncharacterized protein OS=Croco... 35 3.0 tr|A8Q6C5|A8Q6C5_MALGO Putative uncharacterized protein OS=Malas... 35 3.9 tr|Q9LYI9|Q9LYI9_ARATH Putative uncharacterized protein F14F18_1... 35 5.1 tr|B6IDH6|B6IDH6_ARATH At5g11840 OS=Arabidopsis thaliana PE=2 SV=1 35 5.1 tr|Q8DK07|Q8DK07_THEEB Ycf36 protein OS=Thermosynechococcus elon... 34 6.7
>tr|A9RYR8|A9RYR8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121564 PE=4 SV=1 Length = 321
Score = 104 bits (260), Expect = 4e-21 Identities = 51/104 (49%), Positives = 65/104 (62%) Frame = +3
Query: 336 SNDRDGRNGSNGVDGWDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDFGVRLGSL 515 SND D + + + WDPAFEIEVP+DQRP N YSWAQLS ++FG+RLG+L Sbjct: 59 SNDNDDWSSDDDYE-WDPAFEIEVPSDQRPVNELAALKEATLYSWAQLSAVEFGIRLGAL 117
Query: 516 WLLFFVFLGAPIASASFEPSREPXXXXXXXXXXXXXXXXIIVLR 647 W+ FF+ LG PIA+ASFEP+REP ++VLR Sbjct: 118 WVFFFLLLGGPIAAASFEPTREPLKFFLAGGAGSLFAVSVLVLR 161
>tr|Q10J01|Q10J01_ORYSJ Os03g0439700 protein OS=Oryza sativa subsp. japonica GN=Os03g0439700 PE=4 SV=1 Length = 312
Score = 87.4 bits (215), Expect = 7e-16 Identities = 57/149 (38%), Positives = 71/149 (47%), Gaps = 12/149 (8%) Frame = +3
Query: 237 PITLLSRWKSHSDMP------GPSAI-----CNRSTLLCVKALGSNDRDGRNG-SNGVDG 380 P LL R +SH D P G S RS + AL R+G + GV Sbjct: 12 PAALLGRPRSH-DAPQLVGRTGASTTTARRRAARSAVTVTMALKEEPEGSRSGFAGGVPS 70
Query: 381 WDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDFGVRLGSLWLLFFVFLGAPIASA 560 WDP EI+VP +QRP N YSWA+LS F +RLGSLWL+ F L APIA+A Sbjct: 71 WDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLWLITFTVLAAPIAAA 130
Query: 561 SFEPSREPXXXXXXXXXXXXXXXXIIVLR 647 SF P ++P ++VLR Sbjct: 131 SFSPGKDPLKFVLAAGIGTLLLVSLVVLR 159
>tr|A5BUA8|A5BUA8_VITVI Putative uncharacterized protein (Chromosome chr7 scaffold_20, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00019630001 PE=4 SV=1 Length = 309
Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 2/113 (1%) Frame = +3
Query: 315 LCVKALGSNDRDGRNGSNGVDG--WDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWI 488 + ++AL ++ DG G++G+ G WDP EIEVP +QRP N YSW +LS Sbjct: 39 ISIRAL-KDETDG--GTSGIPGGSWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPG 95
Query: 489 DFGVRLGSLWLLFFVFLGAPIASASFEPSREPXXXXXXXXXXXXXXXXIIVLR 647 F +RLG LWL+ F LG PIA+ASF PSREP +IVLR Sbjct: 96 SFFIRLGGLWLVAFTVLGVPIAAASFNPSREPLRFVLAAGTGTLFLVSLIVLR 148
>tr|Q9FN15|Q9FN15_ARATH Gb|AAC18972.1 (Putative uncharacterized protein At5g67370) OS=Arabidopsis thaliana GN=At5g67370 PE=2 SV=1 Length = 327
Score = 86.3 bits (212), Expect = 1e-15 Identities = 48/111 (43%), Positives = 59/111 (53%), Gaps = 2/111 (1%) Frame = +3
Query: 321 VKALGSNDRDGRNGSNGVDG--WDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDF 494 VKA+ +G GS G WDP+ EIEVP+DQRP N YSW +L +F Sbjct: 57 VKAVEDKGNNG-GGSMSFSGQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEF 115
Query: 495 GVRLGSLWLLFFVFLGAPIASASFEPSREPXXXXXXXXXXXXXXXXIIVLR 647 +RLG LWL+ F LG P+A+ASF PSREP +IVLR Sbjct: 116 FIRLGGLWLVTFTVLGVPVAAASFNPSREPLRFILAAGTGTLFLVSLIVLR 166
>tr|B7FKL7|B7FKL7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 258
Score = 84.7 bits (208), Expect = 4e-15 Identities = 48/109 (44%), Positives = 56/109 (51%) Frame = +3
Query: 321 VKALGSNDRDGRNGSNGVDGWDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDFGV 500 VKA+ +GS+G WDP EIEVP +QRP N YSW +L F + Sbjct: 44 VKAVKGEMNGETSGSSG-GSWDPGLEIEVPFEQRPVNEYSSLKDGMLYSWGELGPGSFFL 102
Query: 501 RLGSLWLLFFVFLGAPIASASFEPSREPXXXXXXXXXXXXXXXXIIVLR 647 RLG LWL F LGAPIA+ASF PSREP +IVLR Sbjct: 103 RLGGLWLAVFTVLGAPIAAASFSPSREPLRFILAAGTGTLFIVSLIVLR 151
>tr|Q75KB9|Q75KB9_ORYSJ Expressed protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0054H04.30 PE=4 SV=1 Length = 262
Score = 84.0 bits (206), Expect = 7e-15 Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Frame = +3
Query: 327 ALGSNDRDGRNG-SNGVDGWDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDFGVR 503 AL R+G + GV WDP EI+VP +QRP N YSWA+LS F +R Sbjct: 2 ALKEEPEGSRSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLR 61
Query: 504 LGSLWLLFFVFLGAPIASASFEPSREPXXXXXXXXXXXXXXXXIIVLR 647 LGSLWL+ F L APIA+ASF P ++P ++VLR Sbjct: 62 LGSLWLITFTVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLR 109
>tr|A2XIE1|A2XIE1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12201 PE=4 SV=1 Length = 151
Score = 83.2 bits (204), Expect = 1e-14 Identities = 53/126 (42%), Positives = 64/126 (50%), Gaps = 12/126 (9%) Frame = +3
Query: 237 PITLLSRWKSHSDMP------GPSAI-----CNRSTLLCVKALGSNDRDGRNG-SNGVDG 380 P LL R +SH D P G S RS + AL R+G + GV Sbjct: 12 PAALLGRPRSH-DAPQLVGRTGASTTTARRKAARSAVTVTMALKEEPEGSRSGFAGGVPS 70
Query: 381 WDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDFGVRLGSLWLLFFVFLGAPIASA 560 WDP EI+VP +QRP N YSWA+LS F +RLGSLWL+ F L APIA+A Sbjct: 71 WDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLWLITFTVLAAPIAAA 130
Query: 561 SFEPSR 578 SF P + Sbjct: 131 SFSPGK 136
>tr|B6U8L9|B6U8L9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 328
Score = 72.8 bits (177), Expect = 2e-11 Identities = 36/77 (46%), Positives = 45/77 (58%) Frame = +3
Query: 354 RNGSNGVDGWDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDFGVRLGSLWLLFFV 533 R + G WDP EI+VP +QRP N YSWA+LS F +RLG L L+ F Sbjct: 76 RGFAGGGPSWDPGLEIQVPFEQRPVNEYSALKYSALYSWAELSPGSFFLRLGGLCLVTFT 135
Query: 534 FLGAPIASASFEPSREP 584 L APIA+ASF P ++P Sbjct: 136 VLAAPIAAASFNPGKDP 152
>tr|A8J8C0|A8J8C0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CGLD27 PE=4 SV=1 Length = 283
Score = 64.7 bits (156), Expect = 5e-09 Identities = 32/90 (35%), Positives = 41/90 (45%) Frame = +3
Query: 378 GWDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDFGVRLGSLWLLFFVFLGAPIAS 557 G DP E+ VP DQRP N YSW L D+ RL +W FF F+G PIA Sbjct: 44 GLDPYLEVAVPKDQRPVNQLAELKADPLYSWGALEQGDYVKRLAGVWSFFFAFIGGPIAY 103
Query: 558 ASFEPSREPXXXXXXXXXXXXXXXXIIVLR 647 +FEP +P ++V+R Sbjct: 104 QTFEPVDQPLEWFLSGTTGALVVVAVVVIR 133
>tr|Q00SM7|Q00SM7_OSTTA Homology to unknown gene OS=Ostreococcus tauri GN=Ot18g01400 PE=4 SV=1 Length = 266
Score = 47.8 bits (112), Expect = 6e-04 Identities = 28/89 (31%), Positives = 45/89 (50%) Frame = +3
Query: 315 LCVKALGSNDRDGRNGSNGVDGWDPAFEIEVPADQRPANXXXXXXXXXXYSWAQLSWIDF 494 + + +G +D R+GS +D + A VP DQRPA+ SW + + Sbjct: 31 ILIPRVGGSDEYERSGSL-LDAMEDA--CPVPRDQRPASQLAELKDGFVMSWPTNGALGY 87
Query: 495 GVRLGSLWLLFFVFLGAPIASASFEPSRE 581 VR+G+L+ F+ + PIA S++P RE Sbjct: 88 AVRMGALFTFFYGVVAYPIACGSYDPERE 116
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