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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960650
Clone id TST39A01NGRL0007_P21
Library
Length 667
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0007_P21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATACTGACCACCTCCTCCTGGTCCCCGCCTAGAAGAGTTGCCTGCTGTGAGGAGACTGAG
CCATGGCAGCCAGCACAGCCTCCCTCTCATCTGCGACATTCAGTGGGCAGCAGCTGAATC
CCGTGAATGAATTATCACGCAAGGTGGGAGCCGGTGAGGCTCGCGTGCAGATGATGGCAC
CCAAGAAGGCCTCTTCCTCCGGCAGCATCTGGTATGGCGCCGACCGTCCCCTGTACCTGG
GCCCTTTCTCCGGCAGCCCACCGTCGTACTTGACGGGAGAATTCCCTGGAGACTACGGCT
GGGACACCGCTGGGCTGTCGGCGGATCCAGAGACCTTCGCAAAGAACCGGGAGCTGGAGG
TTATCCACTCCAGGTGGGCAATGCTGGGCGCTCTTGGATGCGTCACCCCTGAACTTCTGG
CCAAGAACGGCGTCAAGTTTGGAGAGGCCGTATGGTTCAAGGCGGGCTCACAAATCTTCG
CAGATGGGGGCCTCGACTACCTGGGTAATCCCAGCCTGGTGCACGCTCAAAGCATCCTAG
CCATCTGGGCCTGCCAGGTCATCCTCATGGGCGCCGTGGAGGGCTACCGCGTTGCAGGCG
GGCCCCTGGGTGAGGTGGAGGACCCCATTTACCCGGGCGGCTCCTTCGACCCCTTGGGTC
TGGCCGA
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 187
Score (bit) 374.0
E-value 1.0e-103
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960650|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_P21, 5'
         (667 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   374   e-103
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   318   2e-86
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   315   2e-85
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   314   3e-85
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   312   9e-85
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   312   1e-84
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   310   3e-84
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   310   4e-84
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   310   6e-84
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   308   1e-83
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   308   1e-83
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   308   2e-83
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   307   3e-83
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   307   3e-83
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   307   3e-83
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   307   4e-83
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   306   6e-83
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   306   8e-83
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   305   1e-82
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   305   1e-82
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   305   1e-82
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   305   1e-82
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   304   2e-82
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   304   2e-82
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   304   3e-82
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   304   3e-82
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   304   3e-82
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   304   3e-82
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   303   7e-82
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   302   1e-81

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  374 bits (961), Expect = e-103
 Identities = 179/187 (95%), Positives = 183/187 (97%)
 Frame = +3

Query: 105 GQQLNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEF 284
           GQQL PVNELSRKVGAGEARVQMMAPK  + SGSIWYG+DRPLYLGPFSGSPPSYL+GEF
Sbjct: 14  GQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEF 73

Query: 285 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 464
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 133

Query: 465 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 644
           GSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS
Sbjct: 134 GSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 193

Query: 645 FDPLGLA 665
           FDPLGLA
Sbjct: 194 FDPLGLA 200


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  318 bits (815), Expect = 2e-86
 Identities = 157/190 (82%), Positives = 170/190 (89%), Gaps = 3/190 (1%)
 Frame = +3

Query: 105 GQQL-NPVNELSRKV-GAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLT 275
           GQ L  PVNELSRKV G  EARV M     K++ S +IWYGADRP +LGPFSG  PSYL 
Sbjct: 14  GQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLN 73

Query: 276 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVW 455
           GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 456 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 635
           FKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 193

Query: 636 GGSFDPLGLA 665
           GGSFDPLGLA
Sbjct: 194 GGSFDPLGLA 203



 Score = 31.2 bits (69), Expect = 5.2
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 249 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 428
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 429 G 431
           G
Sbjct: 240 G 240


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
           PE=2 SV=2
          Length = 265

 Score =  315 bits (806), Expect = 2e-85
 Identities = 150/175 (85%), Positives = 160/175 (91%), Gaps = 4/175 (2%)
 Frame = +3

Query: 153 GEARVQMMA----PKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
           GEAR+ M      PK A+SSGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
           ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLA 665
           LGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGG+FDPLGLA
Sbjct: 146 LGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLA 200


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  314 bits (804), Expect = 3e-85
 Identities = 150/175 (85%), Positives = 159/175 (90%), Gaps = 4/175 (2%)
 Frame = +3

Query: 153 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
           GEARV M       K A+SSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
           ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLA 665
           LGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGG+FDPLGLA
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLA 200


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  312 bits (800), Expect = 9e-85
 Identities = 149/179 (83%), Positives = 162/179 (90%), Gaps = 4/179 (2%)
 Frame = +3

Query: 141 KVGA-GEARVQM---MAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDT 308
           KVG+ GE R+ M   +   K ++SGS WYG DR  YLGPFSG PPSYLTGEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 309 AGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADG 488
           AGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++G
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 489 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLA 665
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 197


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
           OS=Zea mays PE=2 SV=1
          Length = 265

 Score =  312 bits (799), Expect = 1e-84
 Identities = 149/175 (85%), Positives = 158/175 (90%), Gaps = 4/175 (2%)
 Frame = +3

Query: 153 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
           GEARV M       K A++SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLA 665
           LGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 200


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
           PE=2 SV=2
          Length = 261

 Score =  310 bits (795), Expect = 3e-84
 Identities = 148/174 (85%), Positives = 158/174 (90%), Gaps = 3/174 (1%)
 Frame = +3

Query: 153 GEARVQMM---APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 323
           GE R+ M    A  K ++SGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23  GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 324 DPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 503
           DPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 83  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 504 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLA 665
           GNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA
Sbjct: 143 GNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 196


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  310 bits (794), Expect = 4e-84
 Identities = 148/172 (86%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
 Frame = +3

Query: 153 GEARVQMM-APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADP 329
           G A+  M     K+ SSGS WYG DR  YLGPFSG PPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 19  GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 330 ETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 509
           ETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGN
Sbjct: 79  ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 510 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLA 665
           PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLA
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 190


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
           1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 274

 Score =  310 bits (793), Expect = 6e-84
 Identities = 152/175 (86%), Positives = 158/175 (90%), Gaps = 4/175 (2%)
 Frame = +3

Query: 153 GEARVQMM--APKK--ASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 320
           GEARV M     KK  AS+S S WYG DR LYLGPFSG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 35  GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94

Query: 321 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 500
           ADPE FAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF++GGLDY
Sbjct: 95  ADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 154

Query: 501 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLA 665
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLA
Sbjct: 155 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 209



 Score = 30.8 bits (68), Expect = 6.7
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +3

Query: 249 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 428
           +G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G     ++   
Sbjct: 186 AGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 245

Query: 429 G 431
           G
Sbjct: 246 G 246


>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80,
           chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1
          Length = 269

 Score =  308 bits (790), Expect = 1e-83
 Identities = 151/188 (80%), Positives = 166/188 (88%), Gaps = 1/188 (0%)
 Frame = +3

Query: 105 GQQLNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGE 281
           G+QL  +N  S+++GA    ++  A  KK +SSGS WYG DR  YLGPFSG  PSYLTGE
Sbjct: 18  GKQLK-LNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 282 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFK 461
           FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFK
Sbjct: 77  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 136

Query: 462 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 641
           AGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 137 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 196

Query: 642 SFDPLGLA 665
           SFDPLGLA
Sbjct: 197 SFDPLGLA 204
tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 184
Score (bit) 332.0
E-value 1.0e-89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960650|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0007_P21, 5'
         (667 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   332   1e-89
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   328   1e-88
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   328   2e-88
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   327   5e-88
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   326   7e-88
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   326   7e-88
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   326   7e-88
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   326   7e-88
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   324   3e-87
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   324   3e-87
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   323   5e-87
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   322   2e-86
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   322   2e-86
tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   321   3e-86
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   318   2e-85
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   317   3e-85
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   317   4e-85
tr|Q4VV47|Q4VV47_PICSI Chloroplast light harvesting chlorophyll ...   315   1e-84
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding...   315   1e-84
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   315   1e-84
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea...   315   1e-84
tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ...   315   2e-84
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ...   315   2e-84
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ...   315   2e-84
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ...   315   2e-84
tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding...   315   2e-84
tr|Q0J2G2|Q0J2G2_ORYSJ Os09g0346500 protein OS=Oryza sativa subs...   315   2e-84
tr|B8BEP6|B8BEP6_ORYSI Putative uncharacterized protein OS=Oryza...   315   2e-84
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   315   2e-84
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque...   314   3e-84

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  332 bits (852), Expect = 1e-89
 Identities = 160/184 (86%), Positives = 169/184 (91%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
           L PVNELSRKVG  EARV M   +K+S S SIWYGADRP +LGPFSG  PSYL GEF GD
Sbjct: 18  LKPVNELSRKVGTSEARVSM---RKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAG+Q
Sbjct: 75  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQ 134

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
           IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 654 LGLA 665
           LGLA
Sbjct: 195 LGLA 198


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  328 bits (842), Expect = 1e-88
 Identities = 158/185 (85%), Positives = 169/185 (91%), Gaps = 1/185 (0%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
           L PVNELSRKVG+ +ARV M     K++ S SIWYGADRP YLGPFSG  PSYL GEF G
Sbjct: 18  LKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK+GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
           QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 651 PLGLA 665
           PLGLA
Sbjct: 198 PLGLA 202


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  328 bits (841), Expect = 2e-88
 Identities = 157/184 (85%), Positives = 170/184 (92%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
           L PVNELSR+VGA EARV M   +K++ S SIWYGADRP +LGPFSG  PSYL GEF GD
Sbjct: 18  LKPVNELSRRVGANEARVTM---RKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 75  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 134

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
           IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 654 LGLA 665
           LGLA
Sbjct: 195 LGLA 198


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  327 bits (837), Expect = 5e-88
 Identities = 160/184 (86%), Positives = 168/184 (91%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
           L  +NELSRKVG  +ARV M   +KASSS SIWYGADRP YLGP SG  PSYLTGEF GD
Sbjct: 18  LKSINELSRKVGNVQARVTM---RKASSSDSIWYGADRPKYLGPLSGETPSYLTGEFAGD 74

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 75  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 134

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
           IF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 654 LGLA 665
           LGLA
Sbjct: 195 LGLA 198


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  326 bits (836), Expect = 7e-88
 Identities = 157/185 (84%), Positives = 169/185 (91%), Gaps = 1/185 (0%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
           L PV+ELSRKV AGEARV M     K+S S SIWYGADRP +LGPFSG  PSYL GEF G
Sbjct: 19  LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
           QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 651 PLGLA 665
           PLGLA
Sbjct: 199 PLGLA 203


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  326 bits (836), Expect = 7e-88
 Identities = 157/185 (84%), Positives = 169/185 (91%), Gaps = 1/185 (0%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
           L PV+ELSRKV AGEARV M     K+S S SIWYGADRP +LGPFSG  PSYL GEF G
Sbjct: 19  LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
           QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 651 PLGLA 665
           PLGLA
Sbjct: 199 PLGLA 203


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  326 bits (836), Expect = 7e-88
 Identities = 157/184 (85%), Positives = 169/184 (91%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 293
           L PVNELSRKVG+ EARV M    K S+S SIWYGADRP YLGPFSG  PSYLTGEF GD
Sbjct: 18  LKPVNELSRKVGSSEARVTMRRTVK-STSDSIWYGADRPKYLGPFSGETPSYLTGEFAGD 76

Query: 294 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 473
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 77  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 136

Query: 474 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 653
           IF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGPLGE+ DPIYPGGSFDP
Sbjct: 137 IFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGPLGEITDPIYPGGSFDP 196

Query: 654 LGLA 665
           LGLA
Sbjct: 197 LGLA 200


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  326 bits (836), Expect = 7e-88
 Identities = 157/185 (84%), Positives = 169/185 (91%), Gaps = 1/185 (0%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
           L PVNELSRKVG  EARV M     K++ S SIWYGADRP +LGPFSG  PSYLTGEF G
Sbjct: 18  LKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLTGEFAG 77

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 137

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
           QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 651 PLGLA 665
           PLGLA
Sbjct: 198 PLGLA 202


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  324 bits (830), Expect = 3e-87
 Identities = 158/189 (83%), Positives = 170/189 (89%), Gaps = 2/189 (1%)
 Frame = +3

Query: 105 GQQL-NPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTG 278
           GQ L  PVNELSRKVG  EARV M     K++ S SIWYGADRP +LGPFSG  PSYL G
Sbjct: 14  GQSLVKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLNG 73

Query: 279 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWF 458
           EF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWF
Sbjct: 74  EFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWF 133

Query: 459 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPG 638
           KAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPG 193

Query: 639 GSFDPLGLA 665
           GSFDPLGLA
Sbjct: 194 GSFDPLGLA 202


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  324 bits (830), Expect = 3e-87
 Identities = 157/185 (84%), Positives = 169/185 (91%), Gaps = 1/185 (0%)
 Frame = +3

Query: 114 LNPVNELSRKVGAGEARVQMM-APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 290
           L PVNELSRKVG  EARV M  +  K+++S SIWYGADRP YLGPFSG  PSYL GEF G
Sbjct: 18  LKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 291 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 470
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK+GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 471 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 650
           QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 197

Query: 651 PLGLA 665
           PLGLA
Sbjct: 198 PLGLA 202