DK960656
Clone id TST39A01NGRL0008_A03
Library
Length 659
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_A03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAGCCTTCCTCAATTGCAAACTGACCATCTCCCCTCGATCTTCTATTCTGCCTTCCTCGA
TTGCAAGCTCACCATCGCCATGCCTACTTCCCTAGAGGTCATCGTGGGTTCCCTGCAGCA
AACCAGCCCAGCCATGGCCGGAAGCTCCTCATTCATCACCATCAAGCCCTTCCATCTTAC
CTTTGAATTTGTGCGCTCTTACAAACAACCCTTACCCCCTCTCCAAGCTTCAATGGCCAG
CAAGGAAGACCGGGGCGCAGAAGAAAGGGAGAGCAGGAGCTCTGTATCCTCTCTCTTGAA
AGCGGTTCAAGAAGGCCATGGGCCGAATGCAGTGATGCAGCAGGTATCGTCGCTGCGGCA
CTTCTTCATGCCGGAGCTTCCCTTTGCACTGATTACAGAGCTCAAGAAGAGGATGCCTCT
ATCTTTCAGAGAGGATATCGATGAAGGAGAGATGCAGAGGAGCGGAGGGCTTGATGTTGT
AGAGAAGGATCTGGAAGAGCAACTGACCACGGTCATGGGGCCGAGGTGTGCATGGCCGAG
GGAAAAGCTAATTGTTAGCGTCGTGGAAGTGCAGGAAGCAGATGGTGCGCAAGCTAATAT
AGCTGGAGGACCCAGATGCGCATGGCCGAGAGAATCTGCTCATGCACTAGCCTCCTTAC
■■Homology search results ■■ -
sp_hit_id P54841
Definition sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus musculus
Align length 40
Score (bit) 32.7
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960656|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_A03, 5'
(659 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus musculus G... 33 1.7
sp|P54842|MAFB_RAT Transcription factor MafB OS=Rattus norvegicu... 32 2.3
sp|Q6EEF3|TTLL5_CERAE Tubulin polyglutamylase TTLL5 OS=Cercopith... 32 3.9
sp|A0LE33|ARLY_MAGSM Argininosuccinate lyase OS=Magnetococcus sp... 31 5.1
sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3 O... 30 8.6

>sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus musculus
GN=Mafb PE=1 SV=1
Length = 323

Score = 32.7 bits (73), Expect = 1.7
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +1

Query: 70 HHRHAYFPRGHRGFPAA-----NQPSHGRKLLIHHHQALP 174
HH H + P H G+P A + H HHHQA P
Sbjct: 132 HHHHHHHPHPHHGYPGAGVTHDDLGQHAHPHHHHHHQASP 171


>sp|P54842|MAFB_RAT Transcription factor MafB OS=Rattus norvegicus
GN=Mafb PE=1 SV=1
Length = 323

Score = 32.3 bits (72), Expect = 2.3
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = +1

Query: 70 HHRHAYFPRGHRGFPAANQP-----SHGRKLLIHHHQALP 174
HH H + P H G+P A H HHHQA P
Sbjct: 132 HHHHHHHPHPHHGYPGAGVTHDELGPHAHPHHHHHHQASP 171


>sp|Q6EEF3|TTLL5_CERAE Tubulin polyglutamylase TTLL5
OS=Cercopithecus aethiops GN=TTLL5 PE=2 SV=1
Length = 1295

Score = 31.6 bits (70), Expect = 3.9
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2

Query: 14 LQTDHLPSIFYSAFLDCKLTIAMPTSLEVIVGSLQQTSPAMAGSSSFITIKPFHLTFEFV 193
L+ + PS+ A LD K+ +M + + +VG + Q PA S+ +P + TFE
Sbjct: 361 LEVNLSPSLACDAPLDLKIKASMISDMFTVVGFVCQ-DPAQRAST-----RPIYPTFESS 414

Query: 194 R--SYKQPLPPLQASMASKEDR 253
R +++P PL A S E +
Sbjct: 415 RRNPFQKPQRPLPAQFHSSEPK 436


>sp|A0LE33|ARLY_MAGSM Argininosuccinate lyase OS=Magnetococcus sp.
(strain MC-1) GN=argH PE=3 SV=1
Length = 464

Score = 31.2 bits (69), Expect = 5.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2

Query: 428 REDIDEGEMQRSGGLDVVEKDLEEQLTTVMGP 523
R +ID GEM S L+ + +E +LT ++GP
Sbjct: 73 RGEIDRGEMHYSNALEDIHMHVESRLTEIIGP 104


>sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3
OS=Arabidopsis thaliana GN=BSL3 PE=2 SV=2
Length = 1006

Score = 30.4 bits (67), Expect = 8.6
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2

Query: 482 EKDLEEQLTTVMGPRCAWPREKLIVSVVEVQEADGAQANIAGGPRC 619
++ + Q+T V+GPRCA P ++ +++E +E DG GPRC
Sbjct: 58 QQQQQPQVTAVVGPRCA-PTYSVVNAIIEKKE-DGP------GPRC 95


tr_hit_id B0ES08
Definition tr|B0ES08|B0ES08_ENTDI Putative uncharacterized protein OS=Entamoeba dispar SAW760
Align length 98
Score (bit) 34.3
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960656|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_A03, 5'
(659 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0ES08|B0ES08_ENTDI Putative uncharacterized protein OS=Entam... 34 7.0
tr|Q8ENM3|Q8ENM3_OCEIH Hypothetical conserved protein OS=Oceanob... 34 9.1

>tr|B0ES08|B0ES08_ENTDI Putative uncharacterized protein
OS=Entamoeba dispar SAW760 GN=EDI_052920 PE=4 SV=1
Length = 1128

Score = 34.3 bits (77), Expect = 7.0
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2

Query: 314 GHGPNAVMQQVSSLRH---FFMPELPFALITELKKRMPLSFREDIDEGEMQRSGGLDVVE 484
G PN + V S R F +PE ++ EL K + EDI +GE+ S ++
Sbjct: 598 GIAPNYDVDLVGSKREEEVFDIPEDEEMMVEELTKEVDTKKLEDIKKGEISSSSVIECET 657

Query: 485 KDLEEQLTTVMGPRCAWPREKLIVSVVEVQEADGAQAN 598
++ + +LT+ P+ EKL+ V E + +AN
Sbjct: 658 EECKNELTSNTNPKSL--SEKLVEVVGEELKKSIDEAN 693


>tr|Q8ENM3|Q8ENM3_OCEIH Hypothetical conserved protein
OS=Oceanobacillus iheyensis GN=OB2458 PE=4 SV=1
Length = 372

Score = 33.9 bits (76), Expect = 9.1
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2

Query: 44 YSAFLDCKLTIAMPTSLEVIVGSLQQTSPAMAGSSSFITIKPFHLTFEFVRSY 202
Y FLD + P SLE IV ++ GSS ++I+P+H+ ++ S+
Sbjct: 120 YLLFLDADTELYKPDSLETIVNHFEEK-----GSSGILSIEPYHIVKKWYESF 167