DK960658 |
Clone id |
TST39A01NGRL0008_A05 |
Library |
TST39 |
Length |
619 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_A05. 5' end sequence. |
Accession |
DK960658 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AGCAGATGGAGTGTAGTGCTTTACAGGAATCCGTTACGTTGCTTCAAAGCACAATAGACG ACTTACAGAGTGGAGTTGCAAAGCTTTCGGAGATTCAAGAGCACCAGAGTCAGCTCATAA CGGCAGAATTGGAAGAAAAGGACTGCAGCTTAGAAGAAAAGAGAAGGAAGAACAATTTAA TCCTTGATGGCATAGGATGGTATGAAGAAAATCTAGGATTTGCAGTCAGGCCCACCAAGA ATAATGGATTGTGGTTAACATTGACAAAAATAGTGCGCACGGATCCTGATCAAGAATTCT CTTTTTGCATACGCCATGACAAAGAAAGAAACATTTACACTCTGTTGGAGTGCATTCCTT CTTTGGCTGGCAGCAAAGATTTGGTGGATGAGCTGAATCGCACCAACAATTTCAAGAAAT TTGTATGCAACATGCGCAACTTGTTTCGGGCAGAACATCGTACATGAATTCCATGCAAAA GTAGCCAGCCTAGTGCCACTGAGAGGTCTCTTTTATGTTTGTATATATATATTTTAAGCC ACCGAGGGCTTTGCTTATGGCATCAAAGCAACAGGCTTTATCTCANAGCTTTCATAGGTG TTATGAATTTACATTTCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10430 |
Definition |
sp|Q10430|SPC25_SCHPO Kinetochore protein spc25 OS=Schizosaccharomyces pombe |
Align length |
151 |
Score (bit) |
64.7 |
E-value |
4.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PCV1 |
Definition |
tr|A7PCV1|A7PCV1_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
151 |
Score (bit) |
73.2 |
E-value |
1.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960658|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_A05, 5' (619 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PCV1|A7PCV1_VITVI Chromosome chr17 scaffold_12, whole genom... 73 1e-11 tr|A9RXY3|A9RXY3_PHYPA Predicted protein OS=Physcomitrella paten... 73 2e-11 tr|B8A9X7|B8A9X7_ORYSI Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|A3A204|A3A204_ORYSJ Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|A9SMZ5|A9SMZ5_PHYPA Predicted protein OS=Physcomitrella paten... 71 6e-11 tr|Q94DF6|Q94DF6_ORYSJ Putative uncharacterized protein P0518C01... 70 1e-10 tr|Q94HI9|Q94HI9_ORYSA Putative uncharacterized protein OS=Oryza... 65 3e-09 tr|Q65XW0|Q65XW0_ORYSJ cDNA clone:J033094M07, full insert sequen... 65 3e-09 tr|Q0DLB7|Q0DLB7_ORYSJ Os05g0110700 protein (Fragment) OS=Oryza ... 65 3e-09 tr|B8AWZ0|B8AWZ0_ORYSI Putative uncharacterized protein OS=Oryza... 65 3e-09 tr|A3AZ81|A3AZ81_ORYSJ Putative uncharacterized protein OS=Oryza... 65 3e-09 tr|B4FIV3|B4FIV3_MAIZE Putative uncharacterized protein OS=Zea m... 63 1e-08 tr|B6M902|B6M902_BRAFL Putative uncharacterized protein OS=Branc... 63 2e-08 tr|B3RTA2|B3RTA2_TRIAD Putative uncharacterized protein OS=Trich... 63 2e-08 tr|Q8LAK6|Q8LAK6_ARATH Putative uncharacterized protein OS=Arabi... 62 4e-08 tr|Q93VK9|Q93VK9_ARATH Putative uncharacterized protein At3g4821... 61 5e-08 tr|Q0JFL9|Q0JFL9_ORYSJ Os01g0973200 protein OS=Oryza sativa subs... 58 4e-07 tr|B8A2E0|B8A2E0_MAIZE Putative uncharacterized protein OS=Zea m... 57 9e-07 tr|A7RXM6|A7RXM6_NEMVE Predicted protein OS=Nematostella vectens... 57 1e-06 tr|B6K4W9|B6K4W9_SCHJP Kinetochore protein spc25 OS=Schizosaccha... 53 1e-05 tr|Q54Q96|Q54Q96_DICDI Putative uncharacterized protein OS=Dicty... 51 5e-05 tr|Q5JK71|Q5JK71_ORYSJ Putative uncharacterized protein OSJNBa00... 50 8e-05 tr|B0UYS8|B0UYS8_DANRE Novel protein similar to vertebrate SPC25... 50 1e-04 tr|A8K4X8|A8K4X8_HUMAN cDNA FLJ76044, highly similar to Homo sap... 49 3e-04 tr|A8J8J9|A8J8J9_CHLRE Predicted protein (Fragment) OS=Chlamydom... 47 9e-04 tr|A4RQW0|A4RQW0_OSTLU Predicted protein OS=Ostreococcus lucimar... 47 9e-04 tr|Q5CFE2|Q5CFE2_CRYHO Putative uncharacterized protein OS=Crypt... 47 0.001 tr|A2AUT4|A2AUT4_MOUSE SPC25, NDC80 kinetochore complex componen... 45 0.003 tr|A2AUT2|A2AUT2_MOUSE SPC25, NDC80 kinetochore complex componen... 45 0.003 tr|Q5CPG7|Q5CPG7_CRYPV Putative uncharacterized protein OS=Crypt... 44 0.006
>tr|A7PCV1|A7PCV1_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016021001 PE=4 SV=1 Length = 302
Score = 73.2 bits (178), Expect = 1e-11 Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 7/151 (4%) Frame = +3
Query: 18 ALQESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCSLEEKRRKNNLIL---- 185 A+ +S++ ++ I++L+ ++ E + + A + ++D +L K + + Sbjct: 43 AIMDSISATKAKIEELK----RIVEEHKARKDQCAAIISQQDIALATYEGKGDQVTGRRE 98
Query: 186 ---DGIGWYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECI 356 + I WY E LGF + +G+ T I +P +E+SF IRH + YTLL+C Sbjct: 99 EIQEAIAWYNEVLGFQIEG--GHGVKFIFTNINSKNPSEEYSFTIRHANDT--YTLLDCS 154
Query: 357 PSLAGSKDLVDELNRTNNFKKFVCNMRNLFR 449 P L K+L+ ELNRTN KFV MR F+ Sbjct: 155 PHLNDIKELIHELNRTNGLFKFVRIMREKFQ 185
>tr|A9RXY3|A9RXY3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71997 PE=4 SV=1 Length = 514
Score = 72.8 bits (177), Expect = 2e-11 Identities = 39/148 (26%), Positives = 75/148 (50%) Frame = +3
Query: 3 QMECSALQESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCSLEEKRRKNNLI 182 Q E ++ + ++DL +KL +++ + LI+ + + L +++K + Sbjct: 165 QEELLKCEQQTNEIYKNLEDLHEHTSKLFQLKADREALISKCMSDITDKLNHRKQKVKAL 224
Query: 183 LDGIGWYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPS 362 + GWY+ L ++R ++ + T + DPD+ FSF IR DK + +T++EC P Sbjct: 225 HEATGWYKRLL--SLRCEYSDAVKFIFTNVDPRDPDRVFSFSIRLDKSTSSWTMVECKPR 282
Query: 363 LAGSKDLVDELNRTNNFKKFVCNMRNLF 446 + + V+ LN+ N +FV +MR F Sbjct: 283 MEAAASFVESLNKNNELSRFVRSMRREF 310
>tr|B8A9X7|B8A9X7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05404 PE=4 SV=1 Length = 332
Score = 72.0 bits (175), Expect = 3e-11 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 3/145 (2%) Frame = +3
Query: 27 ESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCSLEEKRR---KNNLILDGIG 197 +S+T +T D L V ++ + +I+++LE + +LE K K NL + Sbjct: 110 QSITNAIATNDQLSCLVTDKRASRDEYANVISSQLEAIE-ALEAKTDAAGKKNLD-EAFM 167
Query: 198 WYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPSLAGSK 377 WY++ LGF V G+ +KI +PD E+SFCI+ +K+R Y LL+C P L S+ Sbjct: 168 WYKKFLGFQV--VGGEGVKFVFSKIDIQNPDNEYSFCIKLNKDR--YNLLQCTPFLKDSE 223
Query: 378 DLVDELNRTNNFKKFVCNMRNLFRA 452 +LV +LN +N+ KFV MR F+A Sbjct: 224 ELVKDLNCSNDLFKFVRIMRERFQA 248
>tr|A3A204|A3A204_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004826 PE=4 SV=1 Length = 359
Score = 72.0 bits (175), Expect = 3e-11 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 3/145 (2%) Frame = +3
Query: 27 ESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCSLEEKRR---KNNLILDGIG 197 +S+T +T D L V ++ + +I+++LE + +LE K K NL + Sbjct: 110 QSITNAIATNDQLSCLVTDKRASRDEYANVISSQLEAIE-ALEAKTDAAGKKNLD-EAFM 167
Query: 198 WYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPSLAGSK 377 WY++ LGF V G+ +KI +PD E+SFCI+ +K+R Y LL+C P L S+ Sbjct: 168 WYKKFLGFQV--VGGEGVKFVFSKIDIQNPDNEYSFCIKLNKDR--YNLLQCTPFLKDSE 223
Query: 378 DLVDELNRTNNFKKFVCNMRNLFRA 452 +LV +LN +N+ KFV MR F+A Sbjct: 224 ELVKDLNCSNDLFKFVRIMRERFQA 248
>tr|A9SMZ5|A9SMZ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_81575 PE=4 SV=1 Length = 243
Score = 70.9 bits (172), Expect = 6e-11 Identities = 40/148 (27%), Positives = 73/148 (49%) Frame = +3
Query: 3 QMECSALQESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCSLEEKRRKNNLI 182 Q E ++ + T++DL KL +++ + LI+ L + L +++K + Sbjct: 86 QEEIIKCEQQTNEIYRTLEDLHEHTTKLFQLKADREALISKSLSDITDKLSLRKQKVKAL 145
Query: 183 LDGIGWYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPS 362 + GWY+ L ++R ++ + T + DPD+ FSF IR K +T+++C P Sbjct: 146 HEATGWYKRLL--SLRCEYSDAVKFIFTNVDPRDPDRVFSFSIRLHKSTGSWTMVDCNPW 203
Query: 363 LAGSKDLVDELNRTNNFKKFVCNMRNLF 446 + S V+ LN+ N +FV +MR F Sbjct: 204 VGASASFVETLNKNNELSRFVRSMRREF 231
>tr|Q94DF6|Q94DF6_ORYSJ Putative uncharacterized protein P0518C01.40 (Putative uncharacterized protein P0698H10.14) OS=Oryza sativa subsp. japonica GN=P0518C01.40 PE=4 SV=1 Length = 460
Score = 70.1 bits (170), Expect = 1e-10 Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 8/150 (5%) Frame = +3
Query: 27 ESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCSLEEKRR---KNNLILDGIG 197 +S+T +T D L V ++ + +I+++LE + +LE K K NL + Sbjct: 97 QSITNAIATNDQLSCLVTDKRASRDEYANVISSQLEAIE-ALEAKTDAAGKKNLD-EAFM 154
Query: 198 WYEENLGFAV-----RPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPS 362 WY++ LGF V T G+ +KI +PD E+SFCI+ +K+R Y LL+C P Sbjct: 155 WYKKFLGFQVVGGEVTITVLQGVKFVFSKIDIQNPDNEYSFCIKLNKDR--YNLLQCTPF 212
Query: 363 LAGSKDLVDELNRTNNFKKFVCNMRNLFRA 452 L S++LV +LN +N+ KFV MR F+A Sbjct: 213 LKDSEELVKDLNCSNDLFKFVRIMRERFQA 242
>tr|Q94HI9|Q94HI9_ORYSA Putative uncharacterized protein OS=Oryza sativa PE=4 SV=1 Length = 373
Score = 65.1 bits (157), Expect = 3e-09 Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 4/151 (2%) Frame = +3
Query: 24 QESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCS----LEEKRRKNNLILDG 191 +E+++ + + L+ V ++H + +I+ LE + +E++ R I + Sbjct: 163 KETISSTAAINEKLEGMVTDQRNKRDHHAAVISNHLEAVEALEAKFIEDETRMKK-IEEA 221
Query: 192 IGWYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPSLAG 371 + WY + LGF V G+ KI PD+E+S ++ K+R Y LL+C PS+ Sbjct: 222 VIWYSKFLGFQV--VGGEGVKFIFNKIDLQSPDKEYSVTLKLAKDR--YNLLQCDPSIKD 277
Query: 372 SKDLVDELNRTNNFKKFVCNMRNLFRAEHRT 464 S++L+ +LN TN+ KFV +R F+AE T Sbjct: 278 SEELMKDLNLTNDLFKFVRIVRERFQAEAAT 308
>tr|Q65XW0|Q65XW0_ORYSJ cDNA clone:J033094M07, full insert sequence OS=Oryza sativa subsp. japonica GN=P0016H04.8 PE=2 SV=1 Length = 327
Score = 65.1 bits (157), Expect = 3e-09 Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 4/151 (2%) Frame = +3
Query: 24 QESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCS----LEEKRRKNNLILDG 191 +E+++ + + L+ V ++H + +I+ LE + +E++ R I + Sbjct: 101 KETISSTAAINEKLEGMVTDQRNKRDHHAAVISNHLEAVEALEAKFIEDETRMKK-IEEA 159
Query: 192 IGWYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPSLAG 371 + WY + LGF V G+ KI PD+E+S ++ K+R Y LL+C PS+ Sbjct: 160 VIWYSKFLGFQV--VGGEGVKFIFNKIDLQSPDKEYSVTLKLAKDR--YNLLQCDPSIKD 215
Query: 372 SKDLVDELNRTNNFKKFVCNMRNLFRAEHRT 464 S++L+ +LN TN+ KFV +R F+AE T Sbjct: 216 SEELMKDLNLTNDLFKFVRIVRERFQAEAAT 246
>tr|Q0DLB7|Q0DLB7_ORYSJ Os05g0110700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os05g0110700 PE=4 SV=1 Length = 361
Score = 65.1 bits (157), Expect = 3e-09 Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 4/151 (2%) Frame = +3
Query: 24 QESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCS----LEEKRRKNNLILDG 191 +E+++ + + L+ V ++H + +I+ LE + +E++ R I + Sbjct: 135 KETISSTAAINEKLEGMVTDQRNKRDHHAAVISNHLEAVEALEAKFIEDETRMKK-IEEA 193
Query: 192 IGWYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPSLAG 371 + WY + LGF V G+ KI PD+E+S ++ K+R Y LL+C PS+ Sbjct: 194 VIWYSKFLGFQV--VGGEGVKFIFNKIDLQSPDKEYSVTLKLAKDR--YNLLQCDPSIKD 249
Query: 372 SKDLVDELNRTNNFKKFVCNMRNLFRAEHRT 464 S++L+ +LN TN+ KFV +R F+AE T Sbjct: 250 SEELMKDLNLTNDLFKFVRIVRERFQAEAAT 280
>tr|B8AWZ0|B8AWZ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18163 PE=4 SV=1 Length = 446
Score = 65.1 bits (157), Expect = 3e-09 Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 4/151 (2%) Frame = +3
Query: 24 QESVTLLQSTIDDLQSGVAKLSEIQEHQSQLITAELEEKDCS----LEEKRRKNNLILDG 191 +E+++ + + L+ V ++H + +I+ LE + +E++ R I + Sbjct: 50 KETISSTAAINEKLEGMVTDQRNKRDHHAAVISNHLEAVEALEAKFIEDETRMKK-IEEA 108
Query: 192 IGWYEENLGFAVRPTKNNGLWLTLTKIVRTDPDQEFSFCIRHDKERNIYTLLECIPSLAG 371 + WY + LGF V G+ KI PD+E+S ++ K+R Y LL+C PS+ Sbjct: 109 VIWYSKFLGFQV--VGGEGVKFIFNKIDLQSPDKEYSVTLKLAKDR--YNLLQCDPSIKD 164
Query: 372 SKDLVDELNRTNNFKKFVCNMRNLFRAEHRT 464 S++L+ +LN TN+ KFV +R F+AE T Sbjct: 165 SEELMKDLNLTNDLFKFVRIVRERFQAEAAT 195
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