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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960681
Clone id TST39A01NGRL0008_B04
Library
Length 618
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_B04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
TGTCTTTGAGCTGCTCAGCTTAGCTCAATCTTCTTTTTGATCCTTGTACACCAAGATCAT
CATCATCATACAAAGCCAATTCTGTATTGTGCGCTTTCCAATTCAGCTGTATGACAAATT
ATGGATCCTTAATTTCAGCCCAATCCAATTGAAACATACACTCTAGTGGCCACGGGGGGC
TTCTTGGGGCTTAATCAATGCTAAGTTGAACATTCTGGAGAGATATATTGGGAGCTCTTG
TTAAGAAGGGCACTTGATTTAAAGATGATGGAGATGGACACAGAGATGGAGATGGAGGTG
CGATCAGGGGAAAGAGCTATGTATGGGCAAGGAGGTGGTGCTAGTGAGGAAGGGGTGATG
TGCTCAGGGGGTGCGAGCGACGAGGGCTTTGATGAGGAGCTTTCTGTGCTGCCGCGCCAC
ACCAAGGTCATCGTGACAGGCAATAATCGAACAAAATCTGTTCTAGTTGGCCTGCAAGGA
GTTGTGAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTGCTCACCAATGGGCTG
GAGGTAAAGCTGCAGAGGAATGCATTGAGCGTTTTGGAGCCTCCGACAGGACTTGAGGAT
GACAATGATTCTGAGGAT
■■Homology search results ■■ -
sp_hit_id Q8NAA5
Definition sp|Q8NAA5|CQ076_HUMAN Leucine-rich repeat-containing protein C17orf76 OS=Homo sapiens
Align length 49
Score (bit) 31.6
E-value 3.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960681|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_B04, 5'
         (618 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NAA5|CQ076_HUMAN Leucine-rich repeat-containing protein C17...    32   3.5  
sp|O15399|NMDE4_HUMAN Glutamate [NMDA] receptor subunit epsilon-...    31   4.5  
sp|Q60838|DVL2_MOUSE Segment polarity protein dishevelled homolo...    31   4.5  
sp|Q8BZH4|POGZ_MOUSE Pogo transposable element with ZNF domain O...    31   5.8  
sp|Q6DBN5|PUB62_ARATH U-box domain-containing protein 62 OS=Arab...    31   5.9  
sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces...    30   7.6  
sp|Q8QG92|DCT1B_XENLA Dapper 1-B OS=Xenopus laevis GN=dact1-B PE...    30   7.7  
sp|Q7Z3K3|POGZ_HUMAN Pogo transposable element with ZNF domain O...    30   9.9  

>sp|Q8NAA5|CQ076_HUMAN Leucine-rich repeat-containing protein
           C17orf76 OS=Homo sapiens GN=C17orf76 PE=2 SV=2
          Length = 344

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 400 LSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEV 546
           LS LPR T + + GN  T++VL  L  ++K         W+ L N +++
Sbjct: 226 LSTLPRLTTLALNGNRLTRAVLRDLTDILKDPSKFPNVTWIDLGNNVDI 274


>sp|O15399|NMDE4_HUMAN Glutamate [NMDA] receptor subunit epsilon-4
            OS=Homo sapiens GN=GRIN2D PE=1 SV=1
          Length = 1336

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 20/77 (25%), Positives = 26/77 (33%)
 Frame = -2

Query: 536  PLVSTSQCQPPRPTAFFTTPCRPTRTDFVRLLPVTMTLVWRGXXXXXXXXXXSLAPPEHI 357
            P  + +   PP     F     P    + R  P +  L+  G              P   
Sbjct: 1034 PAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPGAGGAGGTGGAGGGAPAAP 1093

Query: 356  TPSSLAPPPCPYIALSP 306
             P   APPPCPY+ L P
Sbjct: 1094 PPCCAAPPPCPYLDLEP 1110


>sp|Q60838|DVL2_MOUSE Segment polarity protein dishevelled homolog
           DVL-2 OS=Mus musculus GN=Dvl2 PE=1 SV=1
          Length = 736

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 377 LAPPEHITPSSLAPPPCPYIALSPDRT 297
           +APP H + + L PPP P   L P+RT
Sbjct: 99  VAPPAHESRTELVPPPPPLPPLPPERT 125


>sp|Q8BZH4|POGZ_MOUSE Pogo transposable element with ZNF domain
           OS=Mus musculus GN=Pogz PE=1 SV=2
          Length = 1409

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 21/72 (29%), Positives = 29/72 (40%)
 Frame = -2

Query: 521 SQCQPPRPTAFFTTPCRPTRTDFVRLLPVTMTLVWRGXXXXXXXXXXSLAPPEHITPSSL 342
           SQ  P RP +  T P RPT   F  ++P T+T+  R              P    TP++ 
Sbjct: 207 SQMTPVRPGS--TMPVRPTTNTFTTVIPATLTI--RSTVPQSQSQQTKSTPSTSTTPTAT 262

Query: 341 APPPCPYIALSP 306
            P     +A  P
Sbjct: 263 QPTSLGQLAGQP 274


>sp|Q6DBN5|PUB62_ARATH U-box domain-containing protein 62
           OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1
          Length = 363

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 424 KVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWL-VLTNGLEVKLQRNALS 570
           +VI+ GN RT    VG + VV     L GW+ +  L N   VKLQ  +L+
Sbjct: 295 RVIIKGNKRTPPRFVGREAVVTTQC-LNGWYVVKTLDNAESVKLQYRSLA 343


>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces
           hansenii GN=BBP PE=3 SV=2
          Length = 518

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 377 LAPPEHITPSSLAPPPCPYIALSP 306
           LAPP    PSSLAPPP P   ++P
Sbjct: 433 LAPPPPPPPSSLAPPPPPSSDIAP 456


>sp|Q8QG92|DCT1B_XENLA Dapper 1-B OS=Xenopus laevis GN=dact1-B PE=1
           SV=1
          Length = 824

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = -1

Query: 558 PLQLYLQPIGEHQPMPASKANSLLHNSLQAN*NRFCSIIACHDDLGVARQHRKLLIKALV 379
           P+    +P+G+HQ  P  K      +  Q    R  + +A   +LG  R  +++LIK+++
Sbjct: 3   PIPAAPEPLGQHQDSPRRKDKGEAESERQRTRERLEATLAGLAELGHLRHRQEVLIKSVL 62

Query: 378 A 376
           +
Sbjct: 63  S 63


>sp|Q7Z3K3|POGZ_HUMAN Pogo transposable element with ZNF domain
           OS=Homo sapiens GN=POGZ PE=1 SV=2
          Length = 1410

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 20/70 (28%), Positives = 29/70 (41%)
 Frame = -2

Query: 521 SQCQPPRPTAFFTTPCRPTRTDFVRLLPVTMTLVWRGXXXXXXXXXXSLAPPEHITPSSL 342
           SQ  P RP +  T P RPT   F  ++P T+T+  R              P    TP++ 
Sbjct: 207 SQMTPVRPGS--TMPVRPTTNTFTTVIPATLTI--RSTVPQSQSQQTKSTPSTSTTPTAT 262

Query: 341 APPPCPYIAL 312
            P     +A+
Sbjct: 263 QPTSLGQLAV 272
tr_hit_id Q9C9Q1
Definition tr|Q9C9Q1|Q9C9Q1_ARATH Putative uncharacterized protein F9E10.9 (Putative uncharacterized protein) OS=Arabidopsis thaliana
Align length 95
Score (bit) 146.0
E-value 8.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960681|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_B04, 5'
         (618 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9C9Q1|Q9C9Q1_ARATH Putative uncharacterized protein F9E10.9 ...   146   8e-34
tr|A8MR31|A8MR31_ARATH Uncharacterized protein At1g75060.2 OS=Ar...   146   8e-34
tr|Q7XXA1|Q7XXA1_ORYSJ OSJNBa0019G23.16 protein OS=Oryza sativa ...   142   2e-32
tr|Q0JF35|Q0JF35_ORYSJ Os04g0166600 protein OS=Oryza sativa subs...   142   2e-32
tr|Q01HC0|Q01HC0_ORYSA OSIGBa0136O08-OSIGBa0153H12.4 protein OS=...   142   2e-32
tr|A3AQY3|A3AQY3_ORYSJ Putative uncharacterized protein OS=Oryza...   142   2e-32
tr|A7QNL3|A7QNL3_VITVI Chromosome chr2 scaffold_132, whole genom...   142   2e-32
tr|Q6K9X5|Q6K9X5_ORYSJ Putative uncharacterized protein OJ1136_C...   141   3e-32
tr|Q0DWA7|Q0DWA7_ORYSJ Os02g0823200 protein OS=Oryza sativa subs...   141   3e-32
tr|B8AF50|B8AF50_ORYSI Putative uncharacterized protein OS=Oryza...   141   3e-32
tr|Q9LN65|Q9LN65_ARATH F18O14.5 OS=Arabidopsis thaliana PE=4 SV=1     140   5e-32
tr|Q8LA64|Q8LA64_ARATH Putative uncharacterized protein (At1g193...   140   5e-32
tr|B7FJI1|B7FJI1_MEDTR Putative uncharacterized protein OS=Medic...   139   1e-31
tr|A7NTI3|A7NTI3_VITVI Chromosome chr18 scaffold_1, whole genome...   138   3e-31
tr|Q2L7C1|Q2L7C1_9MAGN Putative uncharacterized protein OS=Vitis...   137   5e-31
tr|A7PV10|A7PV10_VITVI Chromosome chr4 scaffold_32, whole genome...   137   5e-31
tr|A5AEH3|A5AEH3_VITVI Putative uncharacterized protein OS=Vitis...   137   5e-31
tr|Q8W2V5|Q8W2V5_ORYSJ Putative uncharacterized protein OSJNBb00...   137   7e-31
tr|Q8SAT6|Q8SAT6_ORYSA Putative uncharacterized protein OSJNBa00...   137   7e-31
tr|Q339G1|Q339G1_ORYSJ cDNA clone:J023001K18, full insert sequen...   137   7e-31
tr|Q0IY80|Q0IY80_ORYSJ Os10g0358600 protein (Fragment) OS=Oryza ...   137   7e-31
tr|B8BGE7|B8BGE7_ORYSI Putative uncharacterized protein OS=Oryza...   137   7e-31
tr|A3C3Y1|A3C3Y1_ORYSJ Putative uncharacterized protein OS=Oryza...   137   7e-31
tr|B4FT44|B4FT44_MAIZE Putative uncharacterized protein OS=Zea m...   135   2e-30
tr|Q7XX75|Q7XX75_ORYSJ OSJNBb0115I21.12 protein OS=Oryza sativa ...   132   1e-29
tr|B8LMV3|B8LMV3_PICSI Putative uncharacterized protein OS=Picea...   132   1e-29
tr|A9TVH4|A9TVH4_PHYPA Predicted protein OS=Physcomitrella paten...   129   1e-28
tr|A9TFM0|A9TFM0_PHYPA Predicted protein (Fragment) OS=Physcomit...   129   1e-28
tr|A9SIS1|A9SIS1_PHYPA Predicted protein (Fragment) OS=Physcomit...   127   5e-28
tr|A9U2E3|A9U2E3_PHYPA Predicted protein OS=Physcomitrella paten...   125   2e-27

>tr|Q9C9Q1|Q9C9Q1_ARATH Putative uncharacterized protein F9E10.9
           (Putative uncharacterized protein) OS=Arabidopsis
           thaliana GN=At1g75060 PE=2 SV=1
          Length = 242

 Score =  146 bits (369), Expect = 8e-34
 Identities = 75/95 (78%), Positives = 79/95 (83%)
 Frame = +1

Query: 331 GGGASEEGVMCSGGASDEGFDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 510
           GGG   +   C G  S E   EELSVLPRHTKV+VTGNNRTKSVLVGLQGVVKKAVGLGG
Sbjct: 15  GGGGFSQLQSCFGDCSSE---EELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGG 71

Query: 511 WHWLVLTNGLEVKLQRNALSVLEPPTGLEDDNDSE 615
           WHWLVLTNG+EVKLQRNALSVLE PTG E+DND E
Sbjct: 72  WHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLE 106


>tr|A8MR31|A8MR31_ARATH Uncharacterized protein At1g75060.2
           OS=Arabidopsis thaliana GN=At1g75060 PE=4 SV=1
          Length = 241

 Score =  146 bits (369), Expect = 8e-34
 Identities = 75/95 (78%), Positives = 79/95 (83%)
 Frame = +1

Query: 331 GGGASEEGVMCSGGASDEGFDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 510
           GGG   +   C G  S E   EELSVLPRHTKV+VTGNNRTKSVLVGLQGVVKKAVGLGG
Sbjct: 15  GGGGFSQLQSCFGDCSSE---EELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGG 71

Query: 511 WHWLVLTNGLEVKLQRNALSVLEPPTGLEDDNDSE 615
           WHWLVLTNG+EVKLQRNALSVLE PTG E+DND E
Sbjct: 72  WHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLE 106


>tr|Q7XXA1|Q7XXA1_ORYSJ OSJNBa0019G23.16 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0019G23.16 PE=4 SV=2
          Length = 219

 Score =  142 bits (358), Expect = 2e-32
 Identities = 70/76 (92%), Positives = 72/76 (94%)
 Frame = +1

Query: 382 EGFDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQRN 561
           E  DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQRN
Sbjct: 17  ESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRN 76

Query: 562 ALSVLEPPTGLEDDND 609
           ALSVLEPPTG EDD+D
Sbjct: 77  ALSVLEPPTGNEDDDD 92


>tr|Q0JF35|Q0JF35_ORYSJ Os04g0166600 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0166600 PE=2 SV=1
          Length = 221

 Score =  142 bits (358), Expect = 2e-32
 Identities = 70/76 (92%), Positives = 72/76 (94%)
 Frame = +1

Query: 382 EGFDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQRN 561
           E  DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQRN
Sbjct: 19  ESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRN 78

Query: 562 ALSVLEPPTGLEDDND 609
           ALSVLEPPTG EDD+D
Sbjct: 79  ALSVLEPPTGNEDDDD 94


>tr|Q01HC0|Q01HC0_ORYSA OSIGBa0136O08-OSIGBa0153H12.4 protein
           OS=Oryza sativa GN=OSIGBa0136O08-OSIGBa0153H12.4 PE=4
           SV=1
          Length = 219

 Score =  142 bits (358), Expect = 2e-32
 Identities = 70/76 (92%), Positives = 72/76 (94%)
 Frame = +1

Query: 382 EGFDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQRN 561
           E  DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQRN
Sbjct: 17  ESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRN 76

Query: 562 ALSVLEPPTGLEDDND 609
           ALSVLEPPTG EDD+D
Sbjct: 77  ALSVLEPPTGNEDDDD 92


>tr|A3AQY3|A3AQY3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_013205 PE=4 SV=1
          Length = 206

 Score =  142 bits (358), Expect = 2e-32
 Identities = 70/76 (92%), Positives = 72/76 (94%)
 Frame = +1

Query: 382 EGFDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQRN 561
           E  DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQRN
Sbjct: 17  ESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRN 76

Query: 562 ALSVLEPPTGLEDDND 609
           ALSVLEPPTG EDD+D
Sbjct: 77  ALSVLEPPTGNEDDDD 92


>tr|A7QNL3|A7QNL3_VITVI Chromosome chr2 scaffold_132, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002572001
           PE=4 SV=1
          Length = 205

 Score =  142 bits (357), Expect = 2e-32
 Identities = 69/79 (87%), Positives = 74/79 (93%)
 Frame = +1

Query: 379 DEGFDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQR 558
           +E  DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQR
Sbjct: 17  EESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQR 76

Query: 559 NALSVLEPPTGLEDDNDSE 615
           NALSVLEPPTG E+D+D +
Sbjct: 77  NALSVLEPPTGNEEDDDHD 95


>tr|Q6K9X5|Q6K9X5_ORYSJ Putative uncharacterized protein
           OJ1136_C04.7 (Putative uncharacterized protein) OS=Oryza
           sativa subsp. japonica GN=OJ1136_C04.7 PE=4 SV=1
          Length = 207

 Score =  141 bits (356), Expect = 3e-32
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = +1

Query: 391 DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQRNALS 570
           DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALS
Sbjct: 20  DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALS 79

Query: 571 VLEPPTGLEDDND 609
           VLEPPTG EDD+D
Sbjct: 80  VLEPPTGNEDDDD 92


>tr|Q0DWA7|Q0DWA7_ORYSJ Os02g0823200 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0823200 PE=4 SV=1
          Length = 385

 Score =  141 bits (356), Expect = 3e-32
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = +1

Query: 391 DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQRNALS 570
           DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALS
Sbjct: 139 DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALS 198

Query: 571 VLEPPTGLEDDND 609
           VLEPPTG EDD+D
Sbjct: 199 VLEPPTGNEDDDD 211


>tr|B8AF50|B8AF50_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09506 PE=4 SV=1
          Length = 239

 Score =  141 bits (356), Expect = 3e-32
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = +1

Query: 391 DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGLEVKLQRNALS 570
           DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALS
Sbjct: 20  DEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALS 79

Query: 571 VLEPPTGLEDDND 609
           VLEPPTG EDD+D
Sbjct: 80  VLEPPTGNEDDDD 92