DK960682 |
Clone id |
TST39A01NGRL0008_B05 |
Library |
TST39 |
Length |
661 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_B05. 5' end sequence. |
Accession |
DK960682 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3371Contig1 |
Sequence |
GAAGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTGTTTTTAACGTCGTCGAAACT ATCCCAAGAGACGACGACAGTTGAACTCAAGAGCTGTTAGTGAAGAGGGAGAGAGCAACC TCACGGCTGCGCCCCACCCTCAGGCCTGCAGGTAGACTTGCCTCTACCCCCCTTCTGTGT CCCAGGCATTCTGGGTTGTGACAAGTGATAACAACACTGTATAAAAGGAGGCGAGCCTGG AAACAGAAGAAGAGAACTTTCAGAACAATCCAAGAGAAAACGTACCGGGAAAATGTATTC CAACGCCAATTTGCGACTGGCAACACTACAAAACCAGCTCTCGTCTTCCTCGCCGCTCTC TGATGGTGCCAAATTCTTGCAGGCAGCAGATCGGCTTGGATTCAAAGTAGAGCCAAACGT GCGGCGGGCTATCTTTGAGTCCTCTCCTGTGGTTGCATTGGAGTCAACAATTATTACCCA TGGGATGCCATATCCTCAAAATGTCCAGACTGCAAAAGAAGTAGAGGGGATTATTGTCAG ACATGGGGCTGTTCCAGCAACTATTGCGATTCTGAAAGGGATTCCATGCATAGGTTTATC TGTGGATGAACTAGAAGAGTTGGGACGAAATGGCTCAAACTTTACGAAAACAGCTCGCAG G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P33025 |
Definition |
sp|P33025|YEIN_ECOLI UPF0724 protein yeiN OS=Escherichia coli (strain K12) |
Align length |
86 |
Score (bit) |
102.0 |
E-value |
2.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LPS4 |
Definition |
tr|Q9LPS4|Q9LPS4_ARATH F11F12.14 protein OS=Arabidopsis thaliana |
Align length |
99 |
Score (bit) |
110.0 |
E-value |
8.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960682|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_B05, 5' (661 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LPS4|Q9LPS4_ARATH F11F12.14 protein OS=Arabidopsis thaliana... 110 8e-23 tr|Q84K35|Q84K35_ARATH Putative uncharacterized protein At1g5051... 110 1e-22 tr|Q9C6Q2|Q9C6Q2_ARATH Putative uncharacterized protein F17J6.5 ... 109 1e-22 tr|B7NQ70|B7NQ70_ECOLX Putative uncharacterized protein yeiN OS=... 107 9e-22 tr|A7PFX6|A7PFX6_VITVI Chromosome chr6 scaffold_15, whole genome... 104 6e-21 tr|A9TWE2|A9TWE2_PHYPA Predicted protein OS=Physcomitrella paten... 103 7e-21 tr|A8AE58|A8AE58_CITK8 Putative uncharacterized protein OS=Citro... 103 9e-21 tr|Q6ZK88|Q6ZK88_ORYSJ Erwinia chrysanthemi IndA protein homolog... 103 9e-21 tr|Q6ZK87|Q6ZK87_ORYSJ cDNA clone:J013116B08, full insert sequen... 103 9e-21 tr|Q0J4M3|Q0J4M3_ORYSJ Os08g0504400 protein OS=Oryza sativa subs... 103 9e-21 tr|B8BC97|B8BC97_ORYSI Putative uncharacterized protein OS=Oryza... 103 9e-21 tr|A3BUM3|A3BUM3_ORYSJ Putative uncharacterized protein OS=Oryza... 103 9e-21 tr|B1IYA5|B1IYA5_ECOLC Indigoidine synthase A family protein OS=... 102 2e-20 tr|A8A227|A8A227_ECOHS Indigoidine synthase A like protein OS=Es... 102 2e-20 tr|B3X9B3|B3X9B3_ECOLX Indigoidine synthase A like protein OS=Es... 102 2e-20 tr|B2N6R4|B2N6R4_ECOLX Indigoidine synthase A like protein OS=Es... 102 2e-20 tr|Q8XE93|Q8XE93_ECO57 Putative uncharacterized protein yeiN (Pu... 102 3e-20 tr|B6I8L6|B6I8L6_ECOSE Putative uncharacterized protein OS=Esche... 102 3e-20 tr|B5YWV6|B5YWV6_ECO5E Indigoidine synthase A like protein OS=Es... 102 3e-20 tr|B2TVS7|B2TVS7_SHIB3 Indigoidine synthase A like protein OS=Sh... 102 3e-20 tr|B1X863|B1X863_ECODH Conserved protein OS=Escherichia coli (st... 102 3e-20 tr|B1LKR2|B1LKR2_ECOSM Indigoidine synthase A like protein OS=Es... 102 3e-20 tr|A7ZNY8|A7ZNY8_ECO24 Indigoidine synthase A like protein OS=Es... 102 3e-20 tr|B7NMX9|B7NMX9_ECOLX Putative uncharacterized protein yeiN OS=... 102 3e-20 tr|B7LAI8|B7LAI8_ECOLX Putative uncharacterized protein yeiN OS=... 102 3e-20 tr|B6ZYS0|B6ZYS0_ECO57 Indigoidine synthase A like protein OS=Es... 102 3e-20 tr|B3WJV9|B3WJV9_ECOLX Indigoidine synthase A like protein OS=Es... 102 3e-20 tr|B3I155|B3I155_ECOLX Indigoidine synthase A like protein OS=Es... 102 3e-20 tr|B3C4R7|B3C4R7_ECO57 Indigoidine synthase A like protein OS=Es... 102 3e-20 tr|B3BLQ5|B3BLQ5_ECO57 Indigoidine synthase A like protein OS=Es... 102 3e-20
>tr|Q9LPS4|Q9LPS4_ARATH F11F12.14 protein OS=Arabidopsis thaliana GN=F11F12.14 PE=4 SV=1 Length = 324
Score = 110 bits (275), Expect = 8e-23 Identities = 58/99 (58%), Positives = 69/99 (69%) Frame = +2
Query: 365 GAKFLQAADRLGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRH 544 G FL+ L K+ P V A+ VVALESTII+HGMPYPQN+QTAKEVE I+ + Sbjct: 13 GPSFLKQLRSL-VKISPQVSEALSNGRAVVALESTIISHGMPYPQNLQTAKEVESIVREN 71
Query: 545 GAVPATIAILKGIPCIGLSVDELEELGRNGSNFTKTARR 661 GA+PATIAIL G+PCIGLS +ELE L G + KTA R Sbjct: 72 GAIPATIAILNGVPCIGLSEEELERLASLGKSVQKTAGR 110
>tr|Q84K35|Q84K35_ARATH Putative uncharacterized protein At1g50510 OS=Arabidopsis thaliana GN=At1g50510 PE=2 SV=1 Length = 330
Score = 110 bits (274), Expect = 1e-22 Identities = 63/123 (51%), Positives = 78/123 (63%), Gaps = 2/123 (1%) Frame = +2
Query: 299 SNANLRLATLQNQXXXXXXXXDGAKFLQAADRLG--FKVEPNVRRAIFESSPVVALESTI 472 S A R++ LQN L+A ++L K+ P V A+ VVALESTI Sbjct: 4 SLAQSRISNLQNHLSP----------LEANNKLRSLVKISPQVSEALSNGRAVVALESTI 53
Query: 473 ITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGIPCIGLSVDELEELGRNGSNFTKT 652 I+HGMPYPQN+QTAKEVE I+ +GA+PATIAIL G+PCIGLS +ELE L G + KT Sbjct: 54 ISHGMPYPQNLQTAKEVESIVRENGAIPATIAILNGVPCIGLSEEELERLASLGKSVQKT 113
Query: 653 ARR 661 A R Sbjct: 114 AGR 116
>tr|Q9C6Q2|Q9C6Q2_ARATH Putative uncharacterized protein F17J6.5 OS=Arabidopsis thaliana GN=F17J6.5 PE=4 SV=1 Length = 362
Score = 109 bits (273), Expect = 1e-22 Identities = 54/86 (62%), Positives = 64/86 (74%) Frame = +2
Query: 404 KVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGI 583 K+ P V A+ VVALESTII+HGMPYPQN+QTAKEVE I+ +GA+PATIAIL G+ Sbjct: 32 KISPQVSEALSNGRAVVALESTIISHGMPYPQNLQTAKEVESIVRENGAIPATIAILNGV 91
Query: 584 PCIGLSVDELEELGRNGSNFTKTARR 661 PCIGLS +ELE L G + KTA R Sbjct: 92 PCIGLSEEELERLASLGKSVQKTAGR 117
>tr|B7NQ70|B7NQ70_ECOLX Putative uncharacterized protein yeiN OS=Escherichia coli GN=yeiN PE=4 SV=1 Length = 311
Score = 107 bits (266), Expect = 9e-22 Identities = 53/86 (61%), Positives = 65/86 (75%) Frame = +2
Query: 404 KVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGI 583 ++ P V+ AI PVVALESTII+HGMP+PQN QTA EVE I +HGAVPATIA++ G+ Sbjct: 12 QISPEVQDAINSKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKHGAVPATIAVIGGV 71
Query: 584 PCIGLSVDELEELGRNGSNFTKTARR 661 +GLS DE+E LGR G N TK +RR Sbjct: 72 MKVGLSKDEIELLGREGHNVTKVSRR 97
>tr|A7PFX6|A7PFX6_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017290001 PE=4 SV=1 Length = 329
Score = 104 bits (259), Expect = 6e-21 Identities = 51/85 (60%), Positives = 64/85 (75%) Frame = +2
Query: 407 VEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGIP 586 + P V A+ VVALESTII+HGMPYP+N++TAKEVE I+ +GAVPAT+AIL GIP Sbjct: 20 ISPEVSNALSCGRAVVALESTIISHGMPYPRNLETAKEVEAIVRTNGAVPATVAILDGIP 79
Query: 587 CIGLSVDELEELGRNGSNFTKTARR 661 CIGLS+++LE L G+ K ARR Sbjct: 80 CIGLSIEQLERLASLGTKAQKAARR 104
>tr|A9TWE2|A9TWE2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108917 PE=4 SV=1 Length = 314
Score = 103 bits (258), Expect = 7e-21 Identities = 53/88 (60%), Positives = 64/88 (72%) Frame = +2
Query: 398 GFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILK 577 G ++ +VR A+ PVVALESTII+HGMPYPQN +TAKEVE I+ GAVPATIAIL Sbjct: 10 GIQIRADVRDALERGFPVVALESTIISHGMPYPQNFETAKEVESIVRDSGAVPATIAILD 69
Query: 578 GIPCIGLSVDELEELGRNGSNFTKTARR 661 G PCIGL EL++L + G KT+RR Sbjct: 70 GAPCIGLEEAELKKLAQLGKKAIKTSRR 97
>tr|A8AE58|A8AE58_CITK8 Putative uncharacterized protein OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=CKO_00617 PE=4 SV=1 Length = 311
Score = 103 bits (257), Expect = 9e-21 Identities = 50/86 (58%), Positives = 65/86 (75%) Frame = +2
Query: 404 KVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAILKGI 583 ++ P V+ A+ P+VALESTII+HGMP+PQN QTA EVE I +HGAVPATIAI+ G+ Sbjct: 12 QISPEVQDALKSKKPIVALESTIISHGMPFPQNAQTAIEVEETIRKHGAVPATIAIIGGV 71
Query: 584 PCIGLSVDELEELGRNGSNFTKTARR 661 +GL+ +E+E LGR G N TK +RR Sbjct: 72 MKVGLNKEEIELLGREGHNVTKVSRR 97
>tr|Q6ZK88|Q6ZK88_ORYSJ Erwinia chrysanthemi IndA protein homolog-like OS=Oryza sativa subsp. japonica GN=OJ1134_H03.5-1 PE=4 SV=1 Length = 327
Score = 103 bits (257), Expect = 9e-21 Identities = 51/89 (57%), Positives = 64/89 (71%) Frame = +2
Query: 395 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 574 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 13 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 72
Query: 575 KGIPCIGLSVDELEELGRNGSNFTKTARR 661 G+P +GLS ++L+ L +G F KTARR Sbjct: 73 NGVPHVGLSGEQLKSLAVSGRQFQKTARR 101
>tr|Q6ZK87|Q6ZK87_ORYSJ cDNA clone:J013116B08, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1134_H03.5-2 PE=2 SV=1 Length = 361
Score = 103 bits (257), Expect = 9e-21 Identities = 51/89 (57%), Positives = 64/89 (71%) Frame = +2
Query: 395 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 574 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 13 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 72
Query: 575 KGIPCIGLSVDELEELGRNGSNFTKTARR 661 G+P +GLS ++L+ L +G F KTARR Sbjct: 73 NGVPHVGLSGEQLKSLAVSGRQFQKTARR 101
>tr|Q0J4M3|Q0J4M3_ORYSJ Os08g0504400 protein OS=Oryza sativa subsp. japonica GN=Os08g0504400 PE=4 SV=1 Length = 304
Score = 103 bits (257), Expect = 9e-21 Identities = 51/89 (57%), Positives = 64/89 (71%) Frame = +2
Query: 395 LGFKVEPNVRRAIFESSPVVALESTIITHGMPYPQNVQTAKEVEGIIVRHGAVPATIAIL 574 +G V P V A+ VVALESTII HGMPYP+N+QTA EVE ++ +GAVPATIAIL Sbjct: 13 MGVAVSPEVEAALARGGAVVALESTIICHGMPYPKNLQTAMEVEAVVRENGAVPATIAIL 72
Query: 575 KGIPCIGLSVDELEELGRNGSNFTKTARR 661 G+P +GLS ++L+ L +G F KTARR Sbjct: 73 NGVPHVGLSGEQLKSLAVSGRQFQKTARR 101
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